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FFCP PHASE1:Mm9::chr14:55735452..55735474,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr14:55735452..55735474,-
|DHSsupport=NA
|short_description=p1@Jph4
|DPIdataset=NA
|description=CAGE_peak_1_at_Jph4_5end
|association_with_transcript=-35bp_to_ENSMUST00000133954_5end
|EntrezGene=319984
|EntrezGene=319984
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-35bp_to_ENSMUST00000133954_5end
|cluster_id=chr14:55735452..55735474,-
|description=CAGE_peak_1_at_Jph4_5end
|id=chr14:55735452..55735474,-
|ontology_enrichment_celltype=CL:0000117!7.51e-13!23;CL:0000337!7.51e-13!23;CL:0000540!1.02e-12!33;CL:0000047!1.02e-12!33;CL:0000031!1.02e-12!33;CL:0000404!1.02e-12!33;CL:0000393!1.54e-08!39;CL:0000211!1.54e-08!39;CL:0002319!2.47e-08!43;CL:0000221!3.02e-08!44;CL:0000133!3.02e-08!44
|ontology_enrichment_celltype_v019_2=CL:0000117,8.63e-14,23;CL:0000337,8.63e-14,23;CL:0000540,1.20e-13,33;CL:0000047,1.20e-13,33;CL:0000031,1.20e-13,33;CL:0000404,1.20e-13,33;CL:0000393,1.41e-09,39;CL:0000211,1.41e-09,39;CL:0002319,1.90e-08,43;CL:0000221,2.32e-08,44;CL:0000133,2.32e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.48e-23!71;UBERON:0003075!1.48e-23!71;UBERON:0007284!1.48e-23!71;UBERON:0001017!4.58e-23!73;UBERON:0005743!4.58e-23!73;UBERON:0000073!1.63e-22!75;UBERON:0001016!1.63e-22!75;UBERON:0004121!1.70e-22!102;UBERON:0000924!1.70e-22!102;UBERON:0006601!1.70e-22!102;UBERON:0001049!7.77e-20!52;UBERON:0005068!7.77e-20!52;UBERON:0006241!7.77e-20!52;UBERON:0007135!7.77e-20!52;UBERON:0000033!4.34e-19!63;UBERON:0000955!6.57e-19!50;UBERON:0006238!6.57e-19!50;UBERON:0002616!2.76e-18!49;UBERON:0002020!2.04e-17!34;UBERON:0003056!6.26e-17!49;UBERON:0003080!1.67e-15!40;UBERON:0002780!7.00e-15!39;UBERON:0001890!7.00e-15!39;UBERON:0006240!7.00e-15!39;UBERON:0002791!8.90e-15!29;UBERON:0003528!8.90e-15!29;UBERON:0001893!8.90e-15!29;UBERON:0000956!2.22e-10!21;UBERON:0001869!2.22e-10!21;UBERON:0000203!2.22e-10!21;UBERON:0000468!1.00e-08!333;UBERON:0002619!2.23e-08!17;UBERON:0002021!4.36e-08!10;UBERON:0000411!4.36e-08!10;UBERON:0001950!4.36e-08!10;UBERON:0000153!1.94e-07!94;UBERON:0007811!2.34e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.75e-24,73;UBERON:0001016,2.64e-23,75;UBERON:0002346,9.03e-23,64;UBERON:0003075,9.03e-23,64;UBERON:0007284,9.03e-23,64;UBERON:0000073,4.48e-22,54;UBERON:0004121,1.97e-21,95;UBERON:0000924,1.97e-21,95;UBERON:0006601,1.97e-21,95;UBERON:0001049,8.92e-21,52;UBERON:0005068,8.92e-21,52;UBERON:0006241,8.92e-21,52;UBERON:0007135,8.92e-21,52;UBERON:0010371,2.99e-20,73;UBERON:0002020,8.65e-19,34;UBERON:0000955,7.29e-18,47;UBERON:0006238,7.29e-18,47;UBERON:0003056,1.85e-17,49;UBERON:0002616,3.29e-17,46;UBERON:0003080,2.35e-16,40;UBERON:0003528,6.28e-16,29;UBERON:0002791,6.28e-16,29;UBERON:0001893,6.28e-16,29;UBERON:0002780,1.10e-15,39;UBERON:0001890,1.10e-15,39;UBERON:0006240,1.10e-15,39;UBERON:0010314,2.16e-13,92;UBERON:0000956,3.66e-11,21;UBERON:0001869,3.66e-11,21;UBERON:0000203,3.66e-11,21;UBERON:0002619,5.41e-09,17;UBERON:0002021,1.25e-08,10;UBERON:0000411,1.25e-08,10;UBERON:0001950,1.25e-08,10
|phase1_expression=3.52327463630547,0,0,0,0,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,28.1493290400041,0,0,0,0,0,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0,0.194429899074283,0,2.87505128729943,0,0,0,0.257259436035947,0,1.03134418455488,64.1343180924925,79.3486468908049,88.1025650873589,0.338844532069132,0,0,0,0,0.299600110518405,2.30530983192933,42.9274994957098,46.0370249711065,38.9101178500057,61.4149616468178,66.0396937445324,47.0364668985424,40.159252356641,51.4762520501612,69.3730050296149,136.37007707498,114.283260742645,69.1084147706216,73.5560654563374,75.0115253601734,89.3385596804419,74.8474271342134,86.0254134983441,71.0054890991539,93.2534509234124,60.5798198932227,0.681535739998656,1.66257432234928,0.869593466105033,0,0,0,0,0,5.47733238513832,0,0,0,1.83096445709685,0,0,0,0,0,0,3.53970027129086,0.258937883647172,5.93768556259299,6.59244241711316,15.2232739156071,8.53277339847416,10.0984169170257,13.6402900277418,2.51333182659351,0,0.86759614151947,1.76922110389975,2.42650274921114,1.10420759230197,0.969750506270444,0,209.045489066245,162.530644487241,0.510914110417183,0,0,0,153.685196029348,258.487840592524,64.4606826338994,292.198682243217,226.563895194673,140.880294211382,149.74868581154,5.49932564791708,1.24406970610093,0.505445516867349,7.99679052368601,0.910843100738926,3.44853156650209,9.18316862007281,9.34369870581433,11.3620953582718,11.7864622662062,11.2442069471675,23.2833033665114,0.215567992932842,2.08016688184601,2.81521798662318,3.5071317188412,5.28289773528636,7.66154766348766,4.32142486456681,1.79130840136644,0,0,0,0.207125772535502,0.938104239924385,0.36012412292203,0.946978942340841,0,0.617068451549513,0,0.536546802799238,0.116765342367169,0.493679549740441,0.656669856316381,0.324275238183423,0.292399974850665,0,0.536825675041487,308.074774646446,91.5851050175631,0.330418782983798,1.58670339998127,4.05247676016945,3.48355007790658,7.7320476793256,7.05892336181699,5.11469500843202,3.23383564391351,1.89811624617805,4.11747386810027,4.52403375840485,3.78017296878187,2.9244613067868,1.79763881730844,1.72910439899755,1.99141273254367,1.32767530667157,2.85621281524322,1.1270773567308,2.64746726198909,1.93952487167626,0.701358198903186,0.569128834118316,0,0.31399745568275,0.123397163921801,0,0.500535317148282,0.196558995113203,0.449724224769707,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0.369506380333209,1.89491411770485,1.30371981153621,0.678980343100753,0.938760993154008,0.837531287209079,0.476087281772027,0.585400943573396,0.630540576424764,0.664394068946325,0.478364305972461,0.655453258862952,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,103.394579952138,85.0956844659395,0,0.252470927204373,6.31016438832513,8.58965237452605,10.7711698866399,1.19484398976276,3.56477878531831,4.24614796183249,3.64329631507405,8.47541987942804,5.13874111330481,125.957956037348,7.66476460124651,7.30068975035746,6.8412522928502,15.8371318053634,2.65490276679926,1.21390318077491,2.41858845571801,1.13163047853539,3.83892460745005,4.30409207121498,2.58428293168221,1.09060118843252,2.49548164869305,1.8962205476149,0,1.03135543248187,2.38307724027652,2.34079422240703,2.8458910432206,1.92903331528433,0.532020700926821,4.63758925765383,6.2528627828806,9.13394847343798,0.469343416127421,1.0591603543191,5.07215315526412,2.63818004706368,1.77610869365496,1.74907482291652,1.3130957840345,1.31312719796049,1.1659233465194,113.109434226411,0.170870880797853,1.23832120777933,0.185194527369712,0.376736914009382,0.136694227721025,0.457556346413045,0,0,0,5.72802370809068,3.47969592939249,6.09958401380546,4.42821897369385,3.97267762427491,4.80397640241591,4.72025212346872,5.78574190077352,2.6175594198403,4.92536898508813,0,0,0.897099276263873,0.827292452285488,1.75006069509643,2.0665571756437,1.18269287843545,1.99507305697782,2.73429208172295,2.51662426621706,1.20792060413003,0.576060012515731,0,0.810900861160657,0.616265742988964,0.129920822977795,0.179026695667481,0.39736270956253,0.240390899039938,0.295379054349154,0.100966449948148,0,0,0.0974578807397524,0,0,1.13365191807606,0,0,0.167884616364078,4.25017106870819,10.8855835761686,8.42497471629419,8.36036678408357,5.517293144389,217.994211250188,246.734326767847,240.616115644547,259.326452156625,184.287197818303,234.927502088197,205.206840070469,246.325698163649,254.212891440139,197.784439089195,2.59468368960442,9.17757208822371,8.70741389346084,18.7192172142586,21.3805425880542,19.4874118957015,12.6680634846921,17.1009097508282,18.2923949467335,14.6564382823003,20.0248646913289,15.6559863350443,15.3572072250607,16.5184893204563,18.6090919416187,18.5754539600399,12.9790445058238,11.1887347868949,18.5438655361488,19.283058537606,15.0862471049583,17.3926290036151,14.0677352068919,18.1683020790411,15.9985946706062,13.4537226547766,17.7440133686589,18.1518100892112,14.3952360676613,18.5176949647054,13.5243920661559,12.5100692616966,15.1415485972785,16.4233051657124,13.5034627686799,32.225564553995,9.12333272937093,16.3302001076707,9.37312827137333,6.61774257358547,7.41977073985349
|phase1_expression=3.52327463630547,0,0,0,0,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,28.1493290400041,0,0,0,0,0,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0,0.194429899074283,0,2.87505128729943,0,0,0,0.257259436035947,0,1.03134418455488,64.1343180924925,79.3486468908049,88.1025650873589,0.338844532069132,0,0,0,0,0.299600110518405,2.30530983192933,42.9274994957098,46.0370249711065,38.9101178500057,61.4149616468178,66.0396937445324,47.0364668985424,40.159252356641,51.4762520501612,69.3730050296149,136.37007707498,114.283260742645,69.1084147706216,73.5560654563374,75.0115253601734,89.3385596804419,74.8474271342134,86.0254134983441,71.0054890991539,93.2534509234124,60.5798198932227,0.681535739998656,1.66257432234928,0.869593466105033,0,0,0,0,0,5.47733238513832,0,0,0,1.83096445709685,0,0,0,0,0,0,3.53970027129086,0.258937883647172,5.93768556259299,6.59244241711316,15.2232739156071,8.53277339847416,10.0984169170257,13.6402900277418,2.51333182659351,0,0.86759614151947,1.76922110389975,2.42650274921114,1.10420759230197,0.969750506270444,0,209.045489066245,162.530644487241,0.510914110417183,0,0,0,153.685196029348,258.487840592524,64.4606826338994,292.198682243217,226.563895194673,140.880294211382,149.74868581154,5.49932564791708,1.24406970610093,0.505445516867349,7.99679052368601,0.910843100738926,3.44853156650209,9.18316862007281,9.34369870581433,11.3620953582718,11.7864622662062,11.2442069471675,23.2833033665114,0.215567992932842,2.08016688184601,2.81521798662318,3.5071317188412,5.28289773528636,7.66154766348766,4.32142486456681,1.79130840136644,0,0,0,0.207125772535502,0.938104239924385,0.36012412292203,0.946978942340841,0,0.617068451549513,0,0.536546802799238,0.116765342367169,0.493679549740441,0.656669856316381,0.324275238183423,0.292399974850665,0,0.536825675041487,308.074774646446,91.5851050175631,0.330418782983798,1.58670339998127,4.05247676016945,3.48355007790658,7.7320476793256,7.05892336181699,5.11469500843202,3.23383564391351,1.89811624617805,4.11747386810027,4.52403375840485,3.78017296878187,2.9244613067868,1.79763881730844,1.72910439899755,1.99141273254367,1.32767530667157,2.85621281524322,1.1270773567308,2.64746726198909,1.93952487167626,0.701358198903186,0.569128834118316,0,0.31399745568275,0.123397163921801,0,0.500535317148282,0.196558995113203,0.449724224769707,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0.369506380333209,1.89491411770485,1.30371981153621,0.678980343100753,0.938760993154008,0.837531287209079,0.476087281772027,0.585400943573396,0.630540576424764,0.664394068946325,0.478364305972461,0.655453258862952,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,103.394579952138,85.0956844659395,0,0.252470927204373,6.31016438832513,8.58965237452605,10.7711698866399,1.19484398976276,3.56477878531831,4.24614796183249,3.64329631507405,8.47541987942804,5.13874111330481,125.957956037348,7.66476460124651,7.30068975035746,6.8412522928502,15.8371318053634,2.65490276679926,1.21390318077491,2.41858845571801,1.13163047853539,3.83892460745005,4.30409207121498,2.58428293168221,1.09060118843252,2.49548164869305,1.8962205476149,0,1.03135543248187,2.38307724027652,2.34079422240703,2.8458910432206,1.92903331528433,0.532020700926821,4.63758925765383,6.2528627828806,9.13394847343798,0.469343416127421,1.0591603543191,5.07215315526412,2.63818004706368,1.77610869365496,1.74907482291652,1.3130957840345,1.31312719796049,1.1659233465194,113.109434226411,0.170870880797853,1.23832120777933,0.185194527369712,0.376736914009382,0.136694227721025,0.457556346413045,0,0,0,5.72802370809068,3.47969592939249,6.09958401380546,4.42821897369385,3.97267762427491,4.80397640241591,4.72025212346872,5.78574190077352,2.6175594198403,4.92536898508813,0,0,0.897099276263873,0.827292452285488,1.75006069509643,2.0665571756437,1.18269287843545,1.99507305697782,2.73429208172295,2.51662426621706,1.20792060413003,0.576060012515731,0,0.810900861160657,0.616265742988964,0.129920822977795,0.179026695667481,0.39736270956253,0.240390899039938,0.295379054349154,0.100966449948148,0,0,0.0974578807397524,0,0,1.13365191807606,0,0,0.167884616364078,4.25017106870819,10.8855835761686,8.42497471629419,8.36036678408357,5.517293144389,217.994211250188,246.734326767847,240.616115644547,259.326452156625,184.287197818303,234.927502088197,205.206840070469,246.325698163649,254.212891440139,197.784439089195,2.59468368960442,9.17757208822371,8.70741389346084,18.7192172142586,21.3805425880542,19.4874118957015,12.6680634846921,17.1009097508282,18.2923949467335,14.6564382823003,20.0248646913289,15.6559863350443,15.3572072250607,16.5184893204563,18.6090919416187,18.5754539600399,12.9790445058238,11.1887347868949,18.5438655361488,19.283058537606,15.0862471049583,17.3926290036151,14.0677352068919,18.1683020790411,15.9985946706062,13.4537226547766,17.7440133686589,18.1518100892112,14.3952360676613,18.5176949647054,13.5243920661559,12.5100692616966,15.1415485972785,16.4233051657124,13.5034627686799,32.225564553995,9.1233327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|short_description=p1@Jph4
}}
}}

Latest revision as of 03:27, 26 September 2015

Short description:p1@Jph4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Jph4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -35bp_to_ENSMUST00000133954_5end
EntrezGene:Jph4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Jph4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A328.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C364.13
Mouse Granule cells, donor2.CNhs12357.11731-123E379.35
Mouse Granule cells, donor3.CNhs12108.11636-122C788.10
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D542.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F546.04
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D938.91
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F161.41
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D566.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D247.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F240.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D651.48
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D369.37
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3136.37
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7114.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D469.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F473.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D875.01
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E489.34
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E574.85
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I686.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D671.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F693.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E160.58
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D75.94
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D615.22
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F510.10
adrenal gland, neonate N00.CNhs11191.1311-23C113.64
adrenal gland, neonate N25.CNhs11223.1377-27I32.51
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2209.05
cerebellum, neonate N30.CNhs11135.1395-42I2162.53
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4153.69
corpus striatum, adult.CNhs10487.19-21D8258.49
corpus striatum, neonate N00.CNhs11226.630-43F164.46
cortex, adult.CNhs10473.12-14D5292.20
cortex, neonate N30.CNhs11107.1392-42F2226.56
diencephalon, adult.CNhs10482.20-12F2140.88
diencephalon, neonate N30.CNhs11201.1388-42B2149.75
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.50
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G48.00
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C99.18
eyeball, embryo E17.CNhs11023.1261-18D49.34
eyeball, neonate N00.CNhs11207.633-15C611.36
eyeball, neonate N01.CNhs11140.1532-43E711.79
eyeball, neonate N02.CNhs11205.1551-44G811.24
eyeball, neonate N16.CNhs11188.777-19A223.28
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E8308.07
hippocampus, neonate N00.CNhs11228.627-43G191.59
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D87.73
intestine, embryo E16.CNhs10585.463-22H47.06
intestine, embryo E17.CNhs10582.482-18D35.11
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C2103.39
medulla oblongata, neonate N30.CNhs11200.1396-42A385.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.59
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.77
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.48
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I9125.96
ovary, adult.CNhs10507.91-2I77.66
ovary, embryo E18.CNhs11040.505-44H77.30
ovary, neonate N00.CNhs11217.1299-22I46.84
oviduct, adult pregnant day01.CNhs10500.988-6G615.84
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F56.25
pituitary gland, neonate N00.CNhs11190.1308-22E99.13
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C9113.11
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E33.48
stomach, embryo E15.CNhs10603.1252-16G86.10
stomach, embryo E16.CNhs11022.459-17D44.43
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B84.72
stomach, neonate N07.CNhs11210.718-18A95.79
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I14.93
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F510.89
uterus, adult.CNhs10509.92-27E58.42
vagina, adult.CNhs10502.89-27D58.36
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1217.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2246.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3240.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7259.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4184.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5234.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6205.21
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7246.33
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8254.21
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9197.78
whole body, embryo E11.CNhs11014.324-5I82.59
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H28.71
whole body, embryo E14.5.CNhs10578.420-27D218.72
whole body, embryo E14.CNhs10519.395-14B121.38
whole body, embryo E16.CNhs10514.453-14F219.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.10
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.29
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.02
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.36
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.28
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.07
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.17
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.52
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.51
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.42
whole body, embryo E17.5.CNhs10513.490-9F913.50
whole body, embryo E17.CNhs10517.475-3I532.23
whole body, embryo E18.CNhs10516.493-3B39.12
whole body, neonate N00.CNhs10525.657-19C216.33
whole body, neonate N01.CNhs10576.659-23C69.37
whole body, neonate N06.CNhs10515.692-21D16.62
whole body, neonate N10.CNhs10518.761-6B47.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.63e-1423
neuroblast (sensu Vertebrata)8.63e-1423
neuron1.20e-1333
neuronal stem cell1.20e-1333
neuroblast1.20e-1333
electrically signaling cell1.20e-1333
electrically responsive cell1.41e-0939
electrically active cell1.41e-0939
neural cell1.90e-0843
ectodermal cell2.32e-0844
neurectodermal cell2.32e-0844

Uber anatomy
Ontology termp-valuen
central nervous system2.75e-2473
nervous system2.64e-2375
neurectoderm9.03e-2364
neural plate9.03e-2364
presumptive neural plate9.03e-2364
regional part of nervous system4.48e-2254
ectoderm-derived structure1.97e-2195
ectoderm1.97e-2195
presumptive ectoderm1.97e-2195
neural tube8.92e-2152
neural rod8.92e-2152
future spinal cord8.92e-2152
neural keel8.92e-2152
ecto-epithelium2.99e-2073
gray matter8.65e-1934
brain7.29e-1847
future brain7.29e-1847
pre-chordal neural plate1.85e-1749
regional part of brain3.29e-1746
anterior neural tube2.35e-1640
brain grey matter6.28e-1629
regional part of telencephalon6.28e-1629
telencephalon6.28e-1629
regional part of forebrain1.10e-1539
forebrain1.10e-1539
future forebrain1.10e-1539
structure with developmental contribution from neural crest2.16e-1392
cerebral cortex3.66e-1121
cerebral hemisphere3.66e-1121
pallium3.66e-1121
regional part of cerebral cortex5.41e-0917
occipital lobe1.25e-0810
visual cortex1.25e-0810
neocortex1.25e-0810
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