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FFCP PHASE1:Mm9::chr14:35632997..35633020,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr14:35632997..35633020,+
|DHSsupport=NA
|short_description=p1@Grid1
|DPIdataset=NA
|description=CAGE_peak_1_at_Grid1_5end
|association_with_transcript=0bp_to_ENSMUST00000043349_5end
|EntrezGene=14803
|EntrezGene=14803
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q61627
|UniProt=Q61627
|association_with_transcript=0bp_to_ENSMUST00000043349_5end
|cluster_id=chr14:35632997..35633020,+
|description=CAGE_peak_1_at_Grid1_5end
|id=chr14:35632997..35633020,+
|ontology_enrichment_celltype=CL:0000117!3.18e-13!23;CL:0000337!3.18e-13!23;CL:0000540!1.57e-12!33;CL:0000047!1.57e-12!33;CL:0000031!1.57e-12!33;CL:0000404!1.57e-12!33;CL:0002319!1.29e-10!43;CL:0000221!1.39e-10!44;CL:0000133!1.39e-10!44;CL:0000393!4.78e-08!39;CL:0000211!4.78e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,6.42e-16,23;CL:0000337,6.42e-16,23;CL:0000540,1.91e-13,33;CL:0000047,1.91e-13,33;CL:0000031,1.91e-13,33;CL:0000404,1.91e-13,33;CL:0002319,7.35e-10,43;CL:0000393,1.22e-09,39;CL:0000211,1.22e-09,39;CL:0000221,2.24e-09,44;CL:0000133,2.24e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.94e-29!73;UBERON:0005743!6.94e-29!73;UBERON:0000073!6.68e-28!75;UBERON:0001016!6.68e-28!75;UBERON:0000033!6.97e-25!63;UBERON:0001049!8.60e-24!52;UBERON:0005068!8.60e-24!52;UBERON:0006241!8.60e-24!52;UBERON:0007135!8.60e-24!52;UBERON:0004121!1.35e-23!102;UBERON:0000924!1.35e-23!102;UBERON:0006601!1.35e-23!102;UBERON:0002346!1.44e-23!71;UBERON:0003075!1.44e-23!71;UBERON:0007284!1.44e-23!71;UBERON:0000955!4.46e-22!50;UBERON:0006238!4.46e-22!50;UBERON:0002616!2.01e-21!49;UBERON:0003056!3.33e-21!49;UBERON:0003080!6.67e-18!40;UBERON:0002020!1.53e-17!34;UBERON:0002780!3.22e-17!39;UBERON:0001890!3.22e-17!39;UBERON:0006240!3.22e-17!39;UBERON:0002791!5.94e-14!29;UBERON:0003528!5.94e-14!29;UBERON:0001893!5.94e-14!29;UBERON:0007811!5.44e-13!86;UBERON:0000153!1.27e-12!94;UBERON:0000956!2.38e-09!21;UBERON:0001869!2.38e-09!21;UBERON:0000203!2.38e-09!21;UBERON:0002619!2.83e-08!17;UBERON:0002021!1.63e-07!10;UBERON:0000411!1.63e-07!10;UBERON:0001950!1.63e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.32e-31,73;UBERON:0002346,2.31e-31,64;UBERON:0003075,2.31e-31,64;UBERON:0007284,2.31e-31,64;UBERON:0001016,5.06e-30,75;UBERON:0000073,2.21e-29,54;UBERON:0001049,1.29e-27,52;UBERON:0005068,1.29e-27,52;UBERON:0006241,1.29e-27,52;UBERON:0007135,1.29e-27,52;UBERON:0004121,2.99e-27,95;UBERON:0000924,2.99e-27,95;UBERON:0006601,2.99e-27,95;UBERON:0010371,1.04e-25,73;UBERON:0003056,1.37e-25,49;UBERON:0000955,4.13e-23,47;UBERON:0006238,4.13e-23,47;UBERON:0002616,2.48e-22,46;UBERON:0003080,1.61e-21,40;UBERON:0002020,4.60e-21,34;UBERON:0002780,1.12e-20,39;UBERON:0001890,1.12e-20,39;UBERON:0006240,1.12e-20,39;UBERON:0010314,4.13e-17,92;UBERON:0003528,1.19e-16,29;UBERON:0002791,1.19e-16,29;UBERON:0001893,1.19e-16,29;UBERON:0000956,5.38e-11,21;UBERON:0001869,5.38e-11,21;UBERON:0000203,5.38e-11,21;UBERON:0002619,1.14e-09,17;UBERON:0002021,6.81e-09,10;UBERON:0000411,6.81e-09,10;UBERON:0001950,6.81e-09,10;UBERON:0002420,4.89e-07,8;UBERON:0007245,4.89e-07,8;UBERON:0010009,4.89e-07,8;UBERON:0010011,4.89e-07,8;UBERON:0000454,4.89e-07,8
|phase1_expression=10.7299727560212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99703463710028,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0.388859798148567,0.419959264876088,1.43752564364972,0,0,0,0,0,0,13.7575193384526,19.5726662330652,12.0427966666174,0.338844532069132,0,0,0,0,2.99600110518405,3.45796474789399,2.48855069540346,2.70011876663381,2.73422449756797,25.1372866275347,26.7250934551452,7.83941114975706,7.3801012684042,7.35375029288017,18.7196997698961,19.5361627270337,13.2101618600369,13.9799464994005,14.0890971147711,9.37644067002168,11.725685958058,16.8828783009504,16.1966142643419,30.3467443037878,23.491327331852,18.2671456908795,0.075726193333184,0.226714680320357,0,0,0,0.539703191637817,0,0.448026887097336,0.702222100658759,0,0,0,0.704217098883403,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,1.04091196059682,0.304465478312141,0,0,0.470354828542819,0,0,0,0,0.161766849947409,0,0,0,11.4184510834503,10.6817820474862,0,0.11981512450592,0,0,19.1732018438173,24.7050325522058,18.7224984648168,18.9468509009581,17.9000820131231,17.8697718321222,19.6311928311987,1.83310854930569,0,0,2.73574412652416,2.21204753036596,3.67843367093557,4.14142898552303,4.9732589885786,8.23241639731067,5.76511741281824,5.71580519814346,8.79591460512653,0.215567992932842,0.567318240503458,1.75951124163949,2.19195732427575,1.66828349535359,0.696504333044333,0.205782136407943,2.58744546864041,0,0,0,0,1.40715635988658,0.720248245844059,1.42046841351126,0.590292695242212,0.617068451549513,0.232533944750408,0,0.467061369468678,0,0,0.0810688095458557,0,0,0,23.3421842906181,11.7311258112384,0,0,1.2797295032114,1.16118335930219,1.15980715189884,1.00841762311671,0.22237804384487,0.380451252225118,0,0.164698954724011,0.502670417600539,0.397912944082302,0.58489226135736,0,0.216138049874694,0,1.13800740571849,1.37098215131675,2.25415471346161,3.86937522906097,1.55161989734101,2.24434623649019,4.93244989569207,1.62371162777562,1.255989822731,1.1105744752962,0,1.16791574001266,0.589676985339609,0,0.405720242777006,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,2.27389694124582,0.488894929326078,1.18821560042632,0.469380496577004,0.335012514883631,0.476087281772027,0.390267295715598,0.157635144106191,0,0.318909537314974,0,0,0.144649058581512,0,0,0,0,10.7568895291821,13.3621322715112,0,0.252470927204373,0.94652465824877,1.56175497718655,2.15423397732799,0.716906393857656,0.445597348164788,0,2.42886421004937,3.50707029493574,1.58115111178609,17.3513510867776,0.425820255624806,2.49291845134157,2.60619134965722,0.659880491890142,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0.307435147943927,0,0,0,0,0,0,2.04263763452273,2.52085531643834,1.68166288917581,4.07240366560025,8.51233121482913,3.0322698992352,5.10101963866575,3.34911444026059,0,0.42366414172764,0,0,0.484393280087717,0.0603129249281559,0.238744688006273,0.492422699235184,0,13.3506217447567,0,0.412773735926445,0.185194527369712,0,0,0,0,0.139951452323658,0,0,1.89801596148681,2.03319467126849,1.72808545314882,1.04544148007234,1.09181281873089,0.944050424693745,0.909188012978695,0.26175594198403,0,0.621339313086926,0,0.448549638131936,0.165458490457098,1.36115831840833,1.03327858782185,0.675824501963113,0.469428954583016,1.43224823328345,0.734015410979976,0.241584120826006,0.288030006257865,0,0.608175645870493,0.205421914329655,0,0.358053391334963,0,0.120195449519969,0.443068581523732,0.201932899896295,0,0.403304740547362,0.292373642219257,0.192423683280659,0.233753804363138,0,0.443971906748129,0.448569283047378,1.00730769818447,0.386379188064381,0.187682475451182,0.73260649706906,0,0,29.3670958160875,13.8097570952153,14.8952833494243,18.0445841460872,18.4972280338073,21.1510291269116,20.2506750069542,12.6089936902782,12.2348450425735,18.1216109113137,0.62272408550506,2.39414924040619,7.17081144167364,5.34834777550247,2.30574478890781,1.47074806760011,4.4449345560323,2.88449080134452,5.13470735346904,5.55933865880354,2.78827229879264,3.9611531691076,3.7456602987953,5.12201219238954,4.42253110958222,3.81034953026459,3.94006708212509,2.89363830695558,4.53294490883637,4.12156976376312,6.17164654293748,5.85670160325814,2.62279808942053,4.21504608233753,3.95259397744389,4.39995961036718,2.56099162021882,3.41990624869196,3.80251518768413,8.97827634652382,4.98267076121531,3.15214343601803,2.86461730218783,4.02835787083512,2.70069255373598,7.49431733813838,3.04111090979031,3.22306581072447,1.3390183244819,0.882365676478062,0.695603506861264
|phase1_expression=10.7299727560212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99703463710028,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0.388859798148567,0.419959264876088,1.43752564364972,0,0,0,0,0,0,13.7575193384526,19.5726662330652,12.0427966666174,0.338844532069132,0,0,0,0,2.99600110518405,3.45796474789399,2.48855069540346,2.70011876663381,2.73422449756797,25.1372866275347,26.7250934551452,7.83941114975706,7.3801012684042,7.35375029288017,18.7196997698961,19.5361627270337,13.2101618600369,13.9799464994005,14.0890971147711,9.37644067002168,11.725685958058,16.8828783009504,16.1966142643419,30.3467443037878,23.491327331852,18.2671456908795,0.075726193333184,0.226714680320357,0,0,0,0.539703191637817,0,0.448026887097336,0.702222100658759,0,0,0,0.704217098883403,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,1.04091196059682,0.304465478312141,0,0,0.470354828542819,0,0,0,0,0.161766849947409,0,0,0,11.4184510834503,10.6817820474862,0,0.11981512450592,0,0,19.1732018438173,24.7050325522058,18.7224984648168,18.9468509009581,17.9000820131231,17.8697718321222,19.6311928311987,1.83310854930569,0,0,2.73574412652416,2.21204753036596,3.67843367093557,4.14142898552303,4.9732589885786,8.23241639731067,5.76511741281824,5.71580519814346,8.79591460512653,0.215567992932842,0.567318240503458,1.75951124163949,2.19195732427575,1.66828349535359,0.696504333044333,0.205782136407943,2.58744546864041,0,0,0,0,1.40715635988658,0.720248245844059,1.42046841351126,0.590292695242212,0.617068451549513,0.232533944750408,0,0.467061369468678,0,0,0.0810688095458557,0,0,0,23.3421842906181,11.7311258112384,0,0,1.2797295032114,1.16118335930219,1.15980715189884,1.00841762311671,0.22237804384487,0.380451252225118,0,0.164698954724011,0.502670417600539,0.397912944082302,0.58489226135736,0,0.216138049874694,0,1.13800740571849,1.37098215131675,2.25415471346161,3.86937522906097,1.55161989734101,2.24434623649019,4.93244989569207,1.62371162777562,1.255989822731,1.1105744752962,0,1.16791574001266,0.589676985339609,0,0.405720242777006,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,2.27389694124582,0.488894929326078,1.18821560042632,0.469380496577004,0.335012514883631,0.476087281772027,0.390267295715598,0.157635144106191,0,0.318909537314974,0,0,0.144649058581512,0,0,0,0,10.7568895291821,13.3621322715112,0,0.252470927204373,0.94652465824877,1.56175497718655,2.15423397732799,0.716906393857656,0.445597348164788,0,2.42886421004937,3.50707029493574,1.58115111178609,17.3513510867776,0.425820255624806,2.49291845134157,2.60619134965722,0.659880491890142,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0.307435147943927,0,0,0,0,0,0,2.04263763452273,2.52085531643834,1.68166288917581,4.07240366560025,8.51233121482913,3.0322698992352,5.10101963866575,3.34911444026059,0,0.42366414172764,0,0,0.484393280087717,0.0603129249281559,0.238744688006273,0.492422699235184,0,13.3506217447567,0,0.412773735926445,0.185194527369712,0,0,0,0,0.139951452323658,0,0,1.89801596148681,2.03319467126849,1.72808545314882,1.04544148007234,1.09181281873089,0.944050424693745,0.909188012978695,0.26175594198403,0,0.621339313086926,0,0.448549638131936,0.165458490457098,1.36115831840833,1.03327858782185,0.675824501963113,0.469428954583016,1.43224823328345,0.734015410979976,0.241584120826006,0.288030006257865,0,0.608175645870493,0.205421914329655,0,0.358053391334963,0,0.120195449519969,0.443068581523732,0.201932899896295,0,0.403304740547362,0.292373642219257,0.192423683280659,0.233753804363138,0,0.443971906748129,0.448569283047378,1.00730769818447,0.386379188064381,0.187682475451182,0.73260649706906,0,0,29.3670958160875,13.8097570952153,14.8952833494243,18.0445841460872,18.4972280338073,21.1510291269116,20.2506750069542,12.6089936902782,12.2348450425735,18.1216109113137,0.62272408550506,2.39414924040619,7.17081144167364,5.34834777550247,2.30574478890781,1.47074806760011,4.4449345560323,2.88449080134452,5.13470735346904,5.55933865880354,2.78827229879264,3.9611531691076,3.7456602987953,5.12201219238954,4.42253110958222,3.81034953026459,3.94006708212509,2.89363830695558,4.53294490883637,4.12156976376312,6.17164654293748,5.85670160325814,2.62279808942053,4.21504608233753,3.95259397744389,4.39995961036718,2.56099162021882,3.41990624869196,3.80251518768413,8.97827634652382,4.98267076121531,3.15214343601803,2.86461730218783,4.02835787083512,2.70069255373598,7.49431733813838,3.04111090979031,3.22306581072447,1.3390183244819,0.882365676478062,0.695603506861264
|short_description=p1@Grid1
}}
}}

Latest revision as of 22:31, 25 September 2015

Short description:p1@Grid1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Grid1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000043349_5end
EntrezGene:Grid1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Grid1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C313.76
Mouse Granule cells, donor2.CNhs12357.11731-123E319.57
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F125.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.54
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D630.35
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.49
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.27
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.42
cerebellum, neonate N30.CNhs11135.1395-42I210.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A419.17
corpus striatum, adult.CNhs10487.19-21D824.71
corpus striatum, neonate N00.CNhs11226.630-43F118.72
cortex, adult.CNhs10473.12-14D518.95
cortex, neonate N30.CNhs11107.1392-42F217.90
diencephalon, adult.CNhs10482.20-12F217.87
diencephalon, neonate N30.CNhs11201.1388-42B219.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C94.14
eyeball, embryo E17.CNhs11023.1261-18D44.97
eyeball, neonate N00.CNhs11207.633-15C68.23
eyeball, neonate N01.CNhs11140.1532-43E75.77
eyeball, neonate N02.CNhs11205.1551-44G85.72
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E823.34
hippocampus, neonate N00.CNhs11228.627-43G111.73
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G72.24
kidney, neonate N10.CNhs11206.758-6D54.93
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C210.76
medulla oblongata, neonate N30.CNhs11200.1396-42A313.36
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I917.35
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B98.51
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C913.35
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.37
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.04
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.15
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H27.17
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.86
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.42e-1623
neuroblast (sensu Vertebrata)6.42e-1623
neuron1.91e-1333
neuronal stem cell1.91e-1333
neuroblast1.91e-1333
electrically signaling cell1.91e-1333
neural cell7.35e-1043
electrically responsive cell1.22e-0939
electrically active cell1.22e-0939
ectodermal cell2.24e-0944
neurectodermal cell2.24e-0944

Uber anatomy
Ontology termp-valuen
central nervous system1.32e-3173
neurectoderm2.31e-3164
neural plate2.31e-3164
presumptive neural plate2.31e-3164
nervous system5.06e-3075
regional part of nervous system2.21e-2954
neural tube1.29e-2752
neural rod1.29e-2752
future spinal cord1.29e-2752
neural keel1.29e-2752
ectoderm-derived structure2.99e-2795
ectoderm2.99e-2795
presumptive ectoderm2.99e-2795
ecto-epithelium1.04e-2573
pre-chordal neural plate1.37e-2549
brain4.13e-2347
future brain4.13e-2347
regional part of brain2.48e-2246
anterior neural tube1.61e-2140
gray matter4.60e-2134
regional part of forebrain1.12e-2039
forebrain1.12e-2039
future forebrain1.12e-2039
structure with developmental contribution from neural crest4.13e-1792
brain grey matter1.19e-1629
regional part of telencephalon1.19e-1629
telencephalon1.19e-1629
cerebral cortex5.38e-1121
cerebral hemisphere5.38e-1121
pallium5.38e-1121
regional part of cerebral cortex1.14e-0917
occipital lobe6.81e-0910
visual cortex6.81e-0910
neocortex6.81e-0910
basal ganglion4.89e-078
nuclear complex of neuraxis4.89e-078
aggregate regional part of brain4.89e-078
collection of basal ganglia4.89e-078
cerebral subcortex4.89e-078
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