FFCP PHASE1:Mm9::chr14:19103636..19103692,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr14:19103636..19103692,+ to FFCP PHASE1:Mm9::chr14:19103636..19103692,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=69721 | |EntrezGene=69721 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CEC5,B8JKK3 | |UniProt=Q8CEC5,B8JKK3 | ||
|association_with_transcript=0bp_to_ENSMUST00000132374,NM_023526,uc007shs.1,uc007sht.1_5end | |||
|cluster_id=chr14:19103636..19103692,+ | |||
|description=CAGE_peak_2_at_Nkiras1_5end | |||
|id=chr14:19103636..19103692,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.73e-13!52;UBERON:0005068!1.73e-13!52;UBERON:0006241!1.73e-13!52;UBERON:0007135!1.73e-13!52;UBERON:0000955!1.38e-12!50;UBERON:0006238!1.38e-12!50;UBERON:0002616!4.34e-12!49;UBERON:0000033!9.69e-12!63;UBERON:0002020!6.56e-11!34;UBERON:0003080!5.32e-10!40;UBERON:0007811!8.29e-10!86;UBERON:0001017!1.34e-09!73;UBERON:0005743!1.34e-09!73;UBERON:0002780!1.91e-09!39;UBERON:0001890!1.91e-09!39;UBERON:0006240!1.91e-09!39;UBERON:0002346!2.07e-09!71;UBERON:0003075!2.07e-09!71;UBERON:0007284!2.07e-09!71;UBERON:0000073!4.28e-09!75;UBERON:0001016!4.28e-09!75;UBERON:0003056!6.32e-09!49;UBERON:0002791!1.53e-08!29;UBERON:0003528!1.53e-08!29;UBERON:0001893!1.53e-08!29;UBERON:0000153!2.69e-08!94;UBERON:0002021!6.03e-08!10;UBERON:0000411!6.03e-08!10;UBERON:0001950!6.03e-08!10;UBERON:0002619!4.38e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.67e-14,54;UBERON:0001049,1.85e-13,52;UBERON:0005068,1.85e-13,52;UBERON:0006241,1.85e-13,52;UBERON:0007135,1.85e-13,52;UBERON:0000955,5.69e-11,47;UBERON:0006238,5.69e-11,47;UBERON:0002020,6.50e-11,34;UBERON:0002346,7.51e-11,64;UBERON:0003075,7.51e-11,64;UBERON:0007284,7.51e-11,64;UBERON:0002616,1.71e-10,46;UBERON:0003080,5.27e-10,40;UBERON:0001017,1.36e-09,73;UBERON:0002780,1.89e-09,39;UBERON:0001890,1.89e-09,39;UBERON:0006240,1.89e-09,39;UBERON:0010371,2.73e-09,73;UBERON:0001016,4.34e-09,75;UBERON:0003056,6.27e-09,49;UBERON:0010314,6.58e-09,92;UBERON:0003528,1.52e-08,29;UBERON:0002791,1.52e-08,29;UBERON:0001893,1.52e-08,29;UBERON:0002021,5.99e-08,10;UBERON:0000411,5.99e-08,10;UBERON:0001950,5.99e-08,10;UBERON:0004121,3.10e-07,95;UBERON:0000924,3.10e-07,95;UBERON:0006601,3.10e-07,95;UBERON:0002619,4.35e-07,17 | |||
|phase1_expression=6.72625157840135,22.6834014965585,24.5699589270349,55.3509506691499,43.5779285053322,2.18243053485457,4.43864017131499,16.7860320474049,3.66050677594334,2.10658073689794,4.28044920563762,1.7549874978974,10.9568467155972,10.9275503023747,0.999329285446988,1.21485160433896,1.39912375625629,5.36285681109004,6.17014951225825,6.36584477697045,8.92954546586233,0.794327609607082,1.30599894569468,7.03966660290989,5.96464130774642,17.8011908875656,9.47676391549965,10.1271479362368,6.84084310042946,5.54466285471848,4.21287970245079,1.27006134691926,0,0,2.3108129580102,1.49611180822643,3.06254034393554,3.34825304589526,5.4693474116666,5.23523743973798,5.88231488031014,7.5135003345429,5.82612423637384,4.53228544712078,4.05507724878058,2.75320128242522,1.56478268869608,0.872100625521786,2.41654801007919,3.11087838518853,3.3596741190087,1.43752564364972,4.86569557567435,7.25362142011344,5.37750078627942,0.771778308107841,5.44413535883638,3.6097046459421,5.26022798234954,5.28990979272033,5.70448263155561,0.677689064138264,0,0.449949858640699,1.97773272513395,0.7104801149461,1.79760066311043,3.45796474789399,4.87341177849845,3.78016627328734,2.73422449756797,30.564655331207,29.3755159465646,6.24703075996266,5.46319184803947,6.43453150627015,50.6533052597188,40.6045735110897,45.4675338438481,4.74790635828698,4.84884511092771,4.68822033501084,55.5574168012748,41.0816705323126,46.1450708285967,22.0971439105251,20.6438937158699,12.3023634244698,3.48340489332647,2.41828992341714,4.92769630792852,6.0229671388697,7.47968467078526,10.7940638327563,10.3964226791627,7.6164570806547,10.9546647702766,0.852151612890289,1.03914401841148,1.7666978725517,8.87313544593087,3.84979432242953,0,0,1.29894624606728,1.26679932737549,1.01104889002957,13.35951392713,3.6251303710604,5.49235914539852,0.693941307064543,4.56698217468212,2.7673859670727,4.06951129492081,4.9387256996996,2.89033160058254,2.71914464507811,5.49477556295664,3.5384422077995,8.7354098971601,5.07935492458905,2.42437626567611,0,24.3008061519584,20.9446706813455,7.66371165625774,1.07833612055328,0.599902730993408,1.77898317902291,55.8719084979989,43.9200578705881,14.1989417887537,55.7976067817207,51.6545223807268,45.2977937139841,44.1296235544301,3.25885964321012,2.86136032403214,3.79084137650512,4.62972082950243,2.08192708740326,2.5289231487682,3.96136685571768,4.82255417074288,4.21826294738233,6.66191345481219,4.8724896771059,11.3829483125167,0.646703978798527,1.70195472151037,2.81521798662318,4.16471891612392,4.72680323683516,3.48252166522167,5.35033554660653,2.38841120182192,1.40442637462647,2.83082697826187,0.568326998791185,2.48550927042602,2.57978665979206,3.6012412292203,2.13070262026689,3.34499193970586,2.93107514486019,2.32533944750408,4.56064782379353,5.13767506415546,6.41783414662574,9.19337798842933,10.8632204791447,10.9649990568999,9.00155472693308,6.71032093801859,43.5300193527743,10.1875566255492,17.1817767151575,18.2470890997846,1.06644125267617,1.62565670302307,1.9330119198314,1.4117846723634,1.55664630691409,2.85338439168839,9.49058123089023,6.42325923423642,5.7807098024062,5.37182474511107,6.04388670069272,1.79763881730844,6.05186539649144,8.36393347668342,0.948339504765408,1.02823661348756,5.63538678365402,1.62921062276251,2.90928730751439,2.24434623649019,3.79419222745544,6.19962621514329,5.96595165797224,6.91024117962083,10.6722945751374,1.00107063429656,0.786235980452812,1.34917267430912,2.02860121388503,0.964708639009667,2.5462585178142,1.15078454980324,3.08056930872567,6.86403532970204,5.75072826109418,5.95425516269605,7.48890415474945,5.05157755894223,9.50806291666135,3.37710464954357,2.21703828199926,1.51593129416388,0.977789858652155,1.86719594352707,0.938760993154008,2.01007508930179,2.61848004974615,2.34160377429359,4.41378403497335,2.43611158613652,3.18909537314974,3.93271955317771,3.28101465545202,2.16973587872267,1.50791283939272,3.26343410291226,1.47529281905711,1.65562047782839,66.7890454349214,56.8476679972185,0.655739781506702,5.80683132570058,1.57754109708128,1.56175497718655,3.44677436372478,0.477937595905104,2.67358408898873,2.26461224631066,1.21443210502468,2.33804686329049,3.95287777946523,28.5975971615408,3.40656204499845,3.02711526234334,3.74640006513225,2.96946221350564,1.32745138339963,1.45668381692989,0.604647113929502,1.88605079755898,0.885905678642318,1.84461088766356,5.94385074286909,3.99887102425256,2.13898427030833,2.52829406348653,0,0,12.2558258071364,1.98067203434441,2.06973894052407,5.78709994585299,7.27094957933322,5.52943334566419,7.56925494769756,7.61162372786498,2.81606049676452,6.14313005505079,3.96951116498931,3.46261131177108,4.84393280087717,3.61877549568935,3.34242563208782,2.62625439592098,5.82961673259701,64.8988557036784,2.05045056957423,1.44470807574256,1.29636169158798,2.82552685507037,1.6403307326523,2.0590035588587,2.54967644990783,3.21888340344413,5.38979897837253,4.77335309007557,1.26534397432454,2.43983360552218,2.05210147561422,2.92723614420256,1.74690050996942,2.15782954215713,3.47144514046411,1.30877970992015,3.36998930558661,3.72803587852155,12.4012446510522,2.99033092087958,3.14371131868485,4.083474955225,2.0665571756437,3.71703476079712,3.87278887530988,5.4685841634459,10.2762157537197,11.3544536788223,6.91272015018877,8.84831137758899,1.62180172232131,3.08132871494482,4.02754551231165,3.04345382634718,5.36439657909415,4.32703618271888,4.87375439676105,5.55315474714812,7.84930108546498,7.15865914471568,4.97035191772737,6.5424052315424,8.41513695707296,5.21479882314986,1.10992976687032,0.807424709485281,1.34307693091263,4.82973985080476,1.50145980360946,1.64836461840539,1.71494703263253,1.50471631210609,79.6300098090064,72.731387368134,73.3306257202428,49.1500101502947,60.2872617398165,67.985450765073,65.4771825224852,41.4295506966283,58.4553707589624,53.8470724221893,1.764384908931,3.59122386060928,3.92687293234509,3.64660075602441,5.03071590307158,8.08911437180062,6.88964856185007,7.82933217507798,9.94849549734627,9.8551912587881,9.37873409593887,8.11093267960128,5.15028291084353,5.18603734479441,5.57124048869449,3.81034953026459,7.3007125345259,5.98018583437486,9.47797571847605,7.21274708658547,6.17164654293748,9.76116933876356,5.7224685587357,7.70336008151341,8.28162547654909,7.53070010235921,7.68297486065645,7.89209134313529,5.29636043998861,10.1005608898393,7.59264115994714,7.78185410766951,5.32000356120596,6.50734732981057,5.20847849649082,5.49583271463481,5.6143586026898,5.37177635120746,11.0947232599929,11.2501623750953,7.65163857547391 | |phase1_expression=6.72625157840135,22.6834014965585,24.5699589270349,55.3509506691499,43.5779285053322,2.18243053485457,4.43864017131499,16.7860320474049,3.66050677594334,2.10658073689794,4.28044920563762,1.7549874978974,10.9568467155972,10.9275503023747,0.999329285446988,1.21485160433896,1.39912375625629,5.36285681109004,6.17014951225825,6.36584477697045,8.92954546586233,0.794327609607082,1.30599894569468,7.03966660290989,5.96464130774642,17.8011908875656,9.47676391549965,10.1271479362368,6.84084310042946,5.54466285471848,4.21287970245079,1.27006134691926,0,0,2.3108129580102,1.49611180822643,3.06254034393554,3.34825304589526,5.4693474116666,5.23523743973798,5.88231488031014,7.5135003345429,5.82612423637384,4.53228544712078,4.05507724878058,2.75320128242522,1.56478268869608,0.872100625521786,2.41654801007919,3.11087838518853,3.3596741190087,1.43752564364972,4.86569557567435,7.25362142011344,5.37750078627942,0.771778308107841,5.44413535883638,3.6097046459421,5.26022798234954,5.28990979272033,5.70448263155561,0.677689064138264,0,0.449949858640699,1.97773272513395,0.7104801149461,1.79760066311043,3.45796474789399,4.87341177849845,3.78016627328734,2.73422449756797,30.564655331207,29.3755159465646,6.24703075996266,5.46319184803947,6.43453150627015,50.6533052597188,40.6045735110897,45.4675338438481,4.74790635828698,4.84884511092771,4.68822033501084,55.5574168012748,41.0816705323126,46.1450708285967,22.0971439105251,20.6438937158699,12.3023634244698,3.48340489332647,2.41828992341714,4.92769630792852,6.0229671388697,7.47968467078526,10.7940638327563,10.3964226791627,7.6164570806547,10.9546647702766,0.852151612890289,1.03914401841148,1.7666978725517,8.87313544593087,3.84979432242953,0,0,1.29894624606728,1.26679932737549,1.01104889002957,13.35951392713,3.6251303710604,5.49235914539852,0.693941307064543,4.56698217468212,2.7673859670727,4.06951129492081,4.9387256996996,2.89033160058254,2.71914464507811,5.49477556295664,3.5384422077995,8.7354098971601,5.07935492458905,2.42437626567611,0,24.3008061519584,20.9446706813455,7.66371165625774,1.07833612055328,0.599902730993408,1.77898317902291,55.8719084979989,43.9200578705881,14.1989417887537,55.7976067817207,51.6545223807268,45.2977937139841,44.1296235544301,3.25885964321012,2.86136032403214,3.79084137650512,4.62972082950243,2.08192708740326,2.5289231487682,3.96136685571768,4.82255417074288,4.21826294738233,6.66191345481219,4.8724896771059,11.3829483125167,0.646703978798527,1.70195472151037,2.81521798662318,4.16471891612392,4.72680323683516,3.48252166522167,5.35033554660653,2.38841120182192,1.40442637462647,2.83082697826187,0.568326998791185,2.48550927042602,2.57978665979206,3.6012412292203,2.13070262026689,3.34499193970586,2.93107514486019,2.32533944750408,4.56064782379353,5.13767506415546,6.41783414662574,9.19337798842933,10.8632204791447,10.9649990568999,9.00155472693308,6.71032093801859,43.5300193527743,10.1875566255492,17.1817767151575,18.2470890997846,1.06644125267617,1.62565670302307,1.9330119198314,1.4117846723634,1.55664630691409,2.85338439168839,9.49058123089023,6.42325923423642,5.7807098024062,5.37182474511107,6.04388670069272,1.79763881730844,6.05186539649144,8.36393347668342,0.948339504765408,1.02823661348756,5.63538678365402,1.62921062276251,2.90928730751439,2.24434623649019,3.79419222745544,6.19962621514329,5.96595165797224,6.91024117962083,10.6722945751374,1.00107063429656,0.786235980452812,1.34917267430912,2.02860121388503,0.964708639009667,2.5462585178142,1.15078454980324,3.08056930872567,6.86403532970204,5.75072826109418,5.95425516269605,7.48890415474945,5.05157755894223,9.50806291666135,3.37710464954357,2.21703828199926,1.51593129416388,0.977789858652155,1.86719594352707,0.938760993154008,2.01007508930179,2.61848004974615,2.34160377429359,4.41378403497335,2.43611158613652,3.18909537314974,3.93271955317771,3.28101465545202,2.16973587872267,1.50791283939272,3.26343410291226,1.47529281905711,1.65562047782839,66.7890454349214,56.8476679972185,0.655739781506702,5.80683132570058,1.57754109708128,1.56175497718655,3.44677436372478,0.477937595905104,2.67358408898873,2.26461224631066,1.21443210502468,2.33804686329049,3.95287777946523,28.5975971615408,3.40656204499845,3.02711526234334,3.74640006513225,2.96946221350564,1.32745138339963,1.45668381692989,0.604647113929502,1.88605079755898,0.885905678642318,1.84461088766356,5.94385074286909,3.99887102425256,2.13898427030833,2.52829406348653,0,0,12.2558258071364,1.98067203434441,2.06973894052407,5.78709994585299,7.27094957933322,5.52943334566419,7.56925494769756,7.61162372786498,2.81606049676452,6.14313005505079,3.96951116498931,3.46261131177108,4.84393280087717,3.61877549568935,3.34242563208782,2.62625439592098,5.82961673259701,64.8988557036784,2.05045056957423,1.44470807574256,1.29636169158798,2.82552685507037,1.6403307326523,2.0590035588587,2.54967644990783,3.21888340344413,5.38979897837253,4.77335309007557,1.26534397432454,2.43983360552218,2.05210147561422,2.92723614420256,1.74690050996942,2.15782954215713,3.47144514046411,1.30877970992015,3.36998930558661,3.72803587852155,12.4012446510522,2.99033092087958,3.14371131868485,4.083474955225,2.0665571756437,3.71703476079712,3.87278887530988,5.4685841634459,10.2762157537197,11.3544536788223,6.91272015018877,8.84831137758899,1.62180172232131,3.08132871494482,4.02754551231165,3.04345382634718,5.36439657909415,4.32703618271888,4.87375439676105,5.55315474714812,7.84930108546498,7.15865914471568,4.97035191772737,6.5424052315424,8.41513695707296,5.21479882314986,1.10992976687032,0.807424709485281,1.34307693091263,4.82973985080476,1.50145980360946,1.64836461840539,1.71494703263253,1.50471631210609,79.6300098090064,72.731387368134,73.3306257202428,49.1500101502947,60.2872617398165,67.985450765073,65.4771825224852,41.4295506966283,58.4553707589624,53.8470724221893,1.764384908931,3.59122386060928,3.92687293234509,3.64660075602441,5.03071590307158,8.08911437180062,6.88964856185007,7.82933217507798,9.94849549734627,9.8551912587881,9.37873409593887,8.11093267960128,5.15028291084353,5.18603734479441,5.57124048869449,3.81034953026459,7.3007125345259,5.98018583437486,9.47797571847605,7.21274708658547,6.17164654293748,9.76116933876356,5.7224685587357,7.70336008151341,8.28162547654909,7.53070010235921,7.68297486065645,7.89209134313529,5.29636043998861,10.1005608898393,7.59264115994714,7.78185410766951,5.32000356120596,6.50734732981057,5.20847849649082,5.49583271463481,5.6143586026898,5.37177635120746,11.0947232599929,11.2501623750953,7.65163857547391 | ||
|short_description=p2@Nkiras1 | |||
}} | }} |
Latest revision as of 18:11, 25 September 2015
Short description: | p2@Nkiras1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nkiras1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000132374, NM_023526, uc007shs.1, uc007sht.1_5end |
EntrezGene: | Nkiras1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.67e-14 | 54 |
neural tube | 1.85e-13 | 52 |
neural rod | 1.85e-13 | 52 |
future spinal cord | 1.85e-13 | 52 |
neural keel | 1.85e-13 | 52 |
brain | 5.69e-11 | 47 |
future brain | 5.69e-11 | 47 |
gray matter | 6.50e-11 | 34 |
neurectoderm | 7.51e-11 | 64 |
neural plate | 7.51e-11 | 64 |
presumptive neural plate | 7.51e-11 | 64 |
regional part of brain | 1.71e-10 | 46 |
anterior neural tube | 5.27e-10 | 40 |
central nervous system | 1.36e-09 | 73 |
regional part of forebrain | 1.89e-09 | 39 |
forebrain | 1.89e-09 | 39 |
future forebrain | 1.89e-09 | 39 |
ecto-epithelium | 2.73e-09 | 73 |
nervous system | 4.34e-09 | 75 |
pre-chordal neural plate | 6.27e-09 | 49 |
structure with developmental contribution from neural crest | 6.58e-09 | 92 |
brain grey matter | 1.52e-08 | 29 |
regional part of telencephalon | 1.52e-08 | 29 |
telencephalon | 1.52e-08 | 29 |
occipital lobe | 5.99e-08 | 10 |
visual cortex | 5.99e-08 | 10 |
neocortex | 5.99e-08 | 10 |
ectoderm-derived structure | 3.10e-07 | 95 |
ectoderm | 3.10e-07 | 95 |
presumptive ectoderm | 3.10e-07 | 95 |
regional part of cerebral cortex | 4.35e-07 | 17 |