FFCP PHASE1:Mm9::chr13:34720187..34720194,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=99 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:34720187..34720194,- | |||
|description=CAGE_peak_at_chr13:34720187..34720194,- | |||
|id=chr13:34720187..34720194,- | |||
|ontology_enrichment_celltype=CL:0002321!6.39e-34!70;CL:0000220!6.39e-34!70;CL:0000055!9.21e-30!50;CL:0000221!5.24e-27!44;CL:0000133!5.24e-27!44;CL:0000548!8.92e-27!115;CL:0000004!8.92e-27!115;CL:0000255!8.92e-27!115;CL:0002319!1.61e-26!43;CL:0002371!1.94e-25!118;CL:0000144!6.03e-25!121;CL:0000012!6.03e-25!121;CL:0000393!8.60e-21!39;CL:0000211!8.60e-21!39;CL:0000540!6.82e-17!33;CL:0000047!6.82e-17!33;CL:0000031!6.82e-17!33;CL:0000404!6.82e-17!33;CL:0000723!6.68e-12!91;CL:0000048!6.68e-12!91;CL:0000034!3.31e-11!97;CL:0000333!6.42e-11!10;CL:0000095!6.42e-11!10;CL:0000243!6.42e-11!10;CL:0000123!6.42e-11!10;CL:0000125!6.42e-11!10;CL:0000030!6.42e-11!10;CL:0000339!6.42e-11!10;CL:0000117!5.38e-10!23;CL:0000337!5.38e-10!23;CL:0002453!3.43e-09!8;CL:0000107!9.56e-08!9;CL:0000066!3.60e-07!25;CL:0000128!3.79e-07!6;CL:0000126!3.79e-07!6;CL:0000127!3.79e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.04e-33,70;CL:0002319,2.25e-27,43;CL:0000221,1.59e-26,44;CL:0000133,1.59e-26,44;CL:0000393,7.43e-19,39;CL:0000211,7.43e-19,39;CL:0000333,2.38e-15,10;CL:0000095,2.38e-15,10;CL:0000243,2.38e-15,10;CL:0000123,2.38e-15,10;CL:0000125,2.38e-15,10;CL:0000030,2.38e-15,10;CL:0000339,2.38e-15,10;CL:0000540,8.22e-15,33;CL:0000047,8.22e-15,33;CL:0000031,8.22e-15,33;CL:0000404,8.22e-15,33;CL:0000723,1.79e-13,91;CL:0000048,1.79e-13,91;CL:0002453,8.33e-13,8;CL:0000034,5.61e-12,97;CL:0000107,1.11e-10,9;CL:0000128,8.40e-10,6;CL:0000126,8.40e-10,6;CL:0000127,8.40e-10,6;CL:0000239,5.43e-08,6;CL:0000677,5.43e-08,6;CL:0000584,5.43e-08,6;CL:0000066,4.33e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.13e-09!75;UBERON:0001016!1.13e-09!75;UBERON:0000010!1.82e-09!11;UBERON:0001017!1.51e-08!73;UBERON:0005743!1.51e-08!73;UBERON:0002410!9.56e-08!9;UBERON:0000344!2.06e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.27e-13,11;UBERON:0001016,1.28e-11,75;UBERON:0002410,1.11e-10,9;UBERON:0001017,4.40e-10,73;UBERON:0000344,2.24e-09,15;UBERON:0004121,2.37e-07,95;UBERON:0000924,2.37e-07,95;UBERON:0006601,2.37e-07,95;UBERON:0001242,4.60e-07,13;UBERON:0001262,4.60e-07,13;UBERON:0004786,4.60e-07,13 | |||
|phase1_expression=3.52327463630547,6.97950815278722,18.1999695755814,6.95667686005709,9.5170188689806,1.17515490338323,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,5.69790044012167,0.198581902401771,0,12.7993938234725,11.4704640533585,12.0588712464154,8.18447792702242,10.7735616342945,5.51067916423484,4.28451220591882,6.65191531965914,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,2.83855407414641,0.183546752161682,8.60630478782843,33.1398237698279,12.5221124158649,17.8875507148341,8.53917171914711,21.5628846547457,0.167782606057736,0,0,7.46052364504246,5.73066879877513,6.70373719960675,1.01158230429799,1.5869729378161,2.53532561402472,5.42151251310611,1.77858959222228,4.04954872776629,5.93319817540185,5.6838409195688,22.7696083993988,36.5007390055477,0.622137673850866,0.540023753326763,1.05162480675691,2.28520787523043,2.87129103237098,0.122490799214954,0.287536413054709,0,3.30347642998166,1.27687338085188,0,0.923204014111357,0.640413505216868,4.16730696445408,2.79182999001381,1.12552522006336,2.90316670775939,2.35702868378934,0.284743361598206,1.67759501242771,19.4616316866283,6.04572480854284,0,0,138.034180742673,25.9057531986152,0,0,6.03911006566533,4.09032774187339,10.1316541795119,8.48014978824817,0.563373679106722,6.41632387071589,0,0,0.216491041011214,0.506719730950197,0.505524445014783,11.3042040921869,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,1.98757366614354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,0,0.660837565967596,14.2803305998314,0,0.232236671860439,0,0,0.444756087689741,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,9.14973836307144,8.98009111882268,4.73931475012158,2.62865677747807,3.11918143715352,2.83076530788832,5.66734982344852,7.89090816360542,3.55759000151871,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0.119372344003136,0,0.582961673259701,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=3.52327463630547,6.97950815278722,18.1999695755814,6.95667686005709,9.5170188689806,1.17515490338323,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,5.69790044012167,0.198581902401771,0,12.7993938234725,11.4704640533585,12.0588712464154,8.18447792702242,10.7735616342945,5.51067916423484,4.28451220591882,6.65191531965914,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,2.83855407414641,0.183546752161682,8.60630478782843,33.1398237698279,12.5221124158649,17.8875507148341,8.53917171914711,21.5628846547457,0.167782606057736,0,0,7.46052364504246,5.73066879877513,6.70373719960675,1.01158230429799,1.5869729378161,2.53532561402472,5.42151251310611,1.77858959222228,4.04954872776629,5.93319817540185,5.6838409195688,22.7696083993988,36.5007390055477,0.622137673850866,0.540023753326763,1.05162480675691,2.28520787523043,2.87129103237098,0.122490799214954,0.287536413054709,0,3.30347642998166,1.27687338085188,0,0.923204014111357,0.640413505216868,4.16730696445408,2.79182999001381,1.12552522006336,2.90316670775939,2.35702868378934,0.284743361598206,1.67759501242771,19.4616316866283,6.04572480854284,0,0,138.034180742673,25.9057531986152,0,0,6.03911006566533,4.09032774187339,10.1316541795119,8.48014978824817,0.563373679106722,6.41632387071589,0,0,0.216491041011214,0.506719730950197,0.505524445014783,11.3042040921869,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,1.98757366614354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,0,0.660837565967596,14.2803305998314,0,0.232236671860439,0,0,0.444756087689741,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,9.14973836307144,8.98009111882268,4.73931475012158,2.62865677747807,3.11918143715352,2.83076530788832,5.66734982344852,7.89090816360542,3.55759000151871,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0.119372344003136,0,0.582961673259701,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:34720187..34720194,- | |||
}} | }} |
Latest revision as of 22:12, 5 August 2015
Short description: | p@chr13:34720187..34720194, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:34720187..34720194, - |
Coexpression cluster: | MCL_coexpression_mm9:99 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.04e-33 | 70 |
neural cell | 2.25e-27 | 43 |
ectodermal cell | 1.59e-26 | 44 |
neurectodermal cell | 1.59e-26 | 44 |
electrically responsive cell | 7.43e-19 | 39 |
electrically active cell | 7.43e-19 | 39 |
migratory neural crest cell | 2.38e-15 | 10 |
neuron associated cell | 2.38e-15 | 10 |
glial cell (sensu Vertebrata) | 2.38e-15 | 10 |
neuron associated cell (sensu Vertebrata) | 2.38e-15 | 10 |
glial cell | 2.38e-15 | 10 |
glioblast | 2.38e-15 | 10 |
glioblast (sensu Vertebrata) | 2.38e-15 | 10 |
neuron | 8.22e-15 | 33 |
neuronal stem cell | 8.22e-15 | 33 |
neuroblast | 8.22e-15 | 33 |
electrically signaling cell | 8.22e-15 | 33 |
somatic stem cell | 1.79e-13 | 91 |
multi fate stem cell | 1.79e-13 | 91 |
oligodendrocyte precursor cell | 8.33e-13 | 8 |
stem cell | 5.61e-12 | 97 |
autonomic neuron | 1.11e-10 | 9 |
oligodendrocyte | 8.40e-10 | 6 |
macroglial cell | 8.40e-10 | 6 |
astrocyte | 8.40e-10 | 6 |
brush border epithelial cell | 5.43e-08 | 6 |
gut absorptive cell | 5.43e-08 | 6 |
enterocyte | 5.43e-08 | 6 |
epithelial cell | 4.33e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 3.27e-13 | 11 |
nervous system | 1.28e-11 | 75 |
autonomic nervous system | 1.11e-10 | 9 |
central nervous system | 4.40e-10 | 73 |
mucosa | 2.24e-09 | 15 |
ectoderm-derived structure | 2.37e-07 | 95 |
ectoderm | 2.37e-07 | 95 |
presumptive ectoderm | 2.37e-07 | 95 |
intestinal mucosa | 4.60e-07 | 13 |
wall of intestine | 4.60e-07 | 13 |
gastrointestinal system mucosa | 4.60e-07 | 13 |