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FFCP PHASE1:Mm9::chr12:60112962..60112979,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:60112962..60112979,-
|DHSsupport=NA
|short_description=p3@Sec23a
|DPIdataset=NA
|description=CAGE_peak_3_at_Sec23a_5end
|association_with_transcript=24bp_to_ENSMUST00000021375,ENSMUST00000134223,NM_009147,uc007npw.1_5end
|EntrezGene=20334
|EntrezGene=20334
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q01405,Q8C1E4
|UniProt=Q01405,Q8C1E4
|association_with_transcript=24bp_to_ENSMUST00000021375,ENSMUST00000134223,NM_009147,uc007npw.1_5end
|cluster_id=chr12:60112962..60112979,-
|description=CAGE_peak_3_at_Sec23a_5end
|id=chr12:60112962..60112979,-
|ontology_enrichment_celltype=CL:0000117!3.35e-14!23;CL:0000337!3.35e-14!23;CL:0000540!2.36e-10!33;CL:0000047!2.36e-10!33;CL:0000031!2.36e-10!33;CL:0000404!2.36e-10!33;CL:0000393!8.54e-08!39;CL:0000211!8.54e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.34e-14,23;CL:0000337,3.34e-14,23;CL:0000540,2.35e-10,33;CL:0000047,2.35e-10,33;CL:0000031,2.35e-10,33;CL:0000404,2.35e-10,33;CL:0000393,8.52e-08,39;CL:0000211,8.52e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!6.59e-21!63;UBERON:0002346!1.72e-19!71;UBERON:0003075!1.72e-19!71;UBERON:0007284!1.72e-19!71;UBERON:0001049!2.10e-19!52;UBERON:0005068!2.10e-19!52;UBERON:0006241!2.10e-19!52;UBERON:0007135!2.10e-19!52;UBERON:0003056!9.57e-19!49;UBERON:0000955!1.47e-18!50;UBERON:0006238!1.47e-18!50;UBERON:0002616!5.40e-18!49;UBERON:0001017!7.63e-18!73;UBERON:0005743!7.63e-18!73;UBERON:0002020!3.38e-17!34;UBERON:0000073!5.72e-17!75;UBERON:0001016!5.72e-17!75;UBERON:0003080!2.36e-16!40;UBERON:0002780!8.52e-16!39;UBERON:0001890!8.52e-16!39;UBERON:0006240!8.52e-16!39;UBERON:0004121!1.62e-15!102;UBERON:0000924!1.62e-15!102;UBERON:0006601!1.62e-15!102;UBERON:0002791!1.43e-14!29;UBERON:0003528!1.43e-14!29;UBERON:0001893!1.43e-14!29;UBERON:0000153!6.45e-11!94;UBERON:0007811!4.48e-10!86;UBERON:0000956!8.14e-10!21;UBERON:0001869!8.14e-10!21;UBERON:0000203!8.14e-10!21;UBERON:0002619!7.94e-08!17;UBERON:0000025!4.19e-07!114;UBERON:0002021!4.60e-07!10;UBERON:0000411!4.60e-07!10;UBERON:0001950!4.60e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.84e-22,92;UBERON:0002346,1.48e-21,64;UBERON:0003075,1.48e-21,64;UBERON:0007284,1.48e-21,64;UBERON:0000073,9.75e-21,54;UBERON:0001049,2.08e-19,52;UBERON:0005068,2.08e-19,52;UBERON:0006241,2.08e-19,52;UBERON:0007135,2.08e-19,52;UBERON:0003056,9.52e-19,49;UBERON:0010371,6.09e-18,73;UBERON:0001017,7.15e-18,73;UBERON:0002020,3.36e-17,34;UBERON:0001016,5.37e-17,75;UBERON:0000955,1.12e-16,47;UBERON:0006238,1.12e-16,47;UBERON:0004121,1.28e-16,95;UBERON:0000924,1.28e-16,95;UBERON:0006601,1.28e-16,95;UBERON:0003080,2.34e-16,40;UBERON:0002616,3.98e-16,46;UBERON:0002780,8.48e-16,39;UBERON:0001890,8.48e-16,39;UBERON:0006240,8.48e-16,39;UBERON:0003528,1.42e-14,29;UBERON:0002791,1.42e-14,29;UBERON:0001893,1.42e-14,29;UBERON:0000956,8.12e-10,21;UBERON:0001869,8.12e-10,21;UBERON:0000203,8.12e-10,21;UBERON:0002619,7.92e-08,17;UBERON:0000025,4.18e-07,114;UBERON:0002021,4.59e-07,10;UBERON:0000411,4.59e-07,10;UBERON:0001950,4.59e-07,10
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21,2.85152941241944,2.4853572523477,28.7483398728937,5.23307911153926,5.46013018508422,5.05573089694524,4.39143399824286,4.89972763923257,8.33236394384853,5.85919731797776,8.80818493175971,8.21386010808421,15.5536203379247,4.10814456816632,3.24360344464263,2.67048488628551,2.98817892848929,2.14832034800978,2.78153896693771,3.36547258655913,3.54454865218985,4.34155734777035,3.96275394605999,4.83965688656834,3.70339946811059,3.75226182397285,4.67507608726276,8.61575457737803,3.10780334723691,2.51198798506532,3.18980771091749,4.82973985080476,4.69206188627955,2.93042598827624,3.00115730710692,3.00943262421218,18.6368108063632,15.1907328047368,18.9055519435001,22.5127668870231,15.7568979547248,13.5970901530146,17.550585006027,9.45674526770863,13.5942722695261,13.4617681055473,7.26511433089237,5.98537310101547,6.4878770186571,6.07766792670735,5.24032906569956,6.06683577885047,6.00066165064361,7.82933217507798,5.45562656306086,5.30664144703975,5.32306529769503,6.79054828989874,7.86588662747012,8.70742072706222,8.04096565378586,8.09699275181225,6.60540657885676,8.10218725947561,8.24171801606613,6.32955356577908,6.51451579532289,6.92155644021416,3.81497903915713,8.72078499793971,7.34053167239579,7.36147088657586,5.48783918618318,3.6829759601298,5.83957689537206,3.92799590160417,7.71127617807132,5.31924204828043,6.95692773388472,6.35241048862461,4.24394544158511,6.49507502638659,7.95367468714389,6.66100267549725,8.60797494309795,4.85301122062934,8.34724208233517
|phase1_expression=7.68714466103011,5.23463111459042,13.1949779422965,3.32710632437513,4.00716583957078,4.36486106970913,1.16806320297763,2.45334314538995,1.12630977721333,1.17032263160997,0.68487187290202,1.19658238493005,2.39681021903688,2.01066925563694,1.99865857089398,3.03712901084739,0.699561878128147,2.5236973228659,2.74228867211478,1.69755860719212,8.1641558545027,1.29078236561151,0,2.87986361028132,3.89995777814189,5.16808767703518,8.61523992318149,6.89507944594845,4.56056206695297,4.28451220591882,1.10865255327652,1.90509202037889,1.84519436275371,0,1.1554064790051,1.49611180822643,1.02084678131185,0.418531630736908,0.7813353445238,2.09409497589519,1.17646297606203,2.04913645487534,0.971020706062307,1.25896817975577,2.12891555560981,2.0190142737785,1.56478268869608,2.39827672018491,2.19686182734472,4.27745777963423,4.33957907038624,0,1.67782606057736,0.725362142011344,0,4.3734104126111,5.73066879877513,4.64104883049698,19.0177473208022,14.2827564403449,16.4796164911607,3.72728985276045,0.889294796111139,0,0.988866362566974,0,0.599200221036809,1.92109152660777,12.4427534770173,14.5806413398226,14.9330722559481,10.5690864229407,11.4851641294839,14.5764051065795,11.7889929352431,13.7882817991503,14.3150645299205,17.2377906415003,17.5111447912118,15.9582408153535,15.6443870560121,15.6274011167028,16.1926139420801,16.8828783009504,16.8078072554491,14.142172102736,13.5253096759148,19.0127434741807,3.10477392666055,3.47629176491213,1.15945795480671,1.72084775396277,3.39985666853875,3.77792234146472,3.24888208723835,4.48026887097336,7.02222100658759,2.21559419351475,4.67614808285164,3.5333957451034,4.92951969218382,3.84979432242953,2.54805239706646,0,0.865964164044856,1.52015919285059,0,5.36664234679582,2.58937883647172,4.00793775475027,4.16364784238726,4.26251669636998,4.61230994512117,4.6724018571313,4.46837087115678,3.14166478324189,5.19109432242185,2.02439099687876,1.76922110389975,8.57364304721269,6.40440403535141,9.69750506270444,0,9.07620470735796,7.95897485891129,3.83185582812887,1.55759661857696,2.39961092397363,2.41433431438823,14.5296920222678,12.8100168789215,15.0785222535437,13.5582969749976,14.0643501531682,14.7529511637288,14.2772311499627,9.3692214742291,5.59831367745419,3.79084137650512,4.62972082950243,5.85541993332167,5.9774547152703,9.36323074987816,8.59017461663576,9.25296388458059,8.96796041993949,11.8064172945258,9.31332134660456,4.095791865724,7.56424320671277,7.9178005873777,7.45265490253754,7.22922847986555,6.96504333044333,5.76189981942242,5.37392520409932,1.40442637462647,1.80143534980301,3.12579849335152,7.04227626620706,4.69052119962192,5.40186184383045,7.10234206755631,5.1158700254325,6.63348585415727,3.72054311600653,5.90201483079162,7.35621656913168,6.7469538464527,5.74586124276833,6.08016071593918,8.04099930839328,4.39100230582101,7.51555945058082,9.46304768538573,15.6415010816512,5.94753809370836,6.08236303326152,5.33220626338085,4.64473343720877,4.89696353023955,3.63030344322017,5.33707305227689,5.70676878337677,4.74529061544512,5.59976446061637,5.7807098024062,4.37704238490532,3.31438948102504,2.69645822596266,3.45820879799511,5.77509692437665,3.98302592001472,4.45569199177942,1.1270773567308,5.09128319613286,4.26695471768777,7.29412526859313,5.05892296994058,2.65698266363284,4.23896565171712,3.57851775373222,4.15033677922008,2.66952169145751,3.34150291692445,2.47348323623339,2.23146133527353,2.41177159752417,2.29163266603278,4.31544206176216,3.24270453550071,1.37280706594041,2.87536413054709,2.23284568601102,3.74445207737473,2.27320990152401,3.40855085691633,2.8946611281802,2.21703828199926,6.44270800019648,5.21487924614483,5.94107800213158,2.81628297946203,3.85264392116176,2.85652369063216,4.29294025287157,5.2019597555043,3.32197034473162,4.14582398509466,3.11340297959902,2.59027472798843,2.74833211304872,4.52373851817817,1.63171705145613,3.44234991113325,1.93155722413313,11.3990918891332,14.8858841972098,4.59017847054691,18.1779067587149,4.41711507182759,4.68526493155966,5.38558494331997,2.38968797952552,3.56477878531831,3.67999490025482,3.64329631507405,5.55286130031493,3.95287777946523,14.4594592389813,4.9679029822894,5.1639025063504,9.93610452056814,4.12425307431339,1.32745138339963,2.42780636154981,2.41858845571801,2.64047111658257,0.885905678642318,2.15204603560749,3.10113951801865,2.90826983582004,2.49548164869305,3.16036757935816,1.05418608574999,2.06271086496374,7.14923172082955,6.84232157318979,5.56242340265844,3.21505552547388,6.56158864476412,5.88617098086833,8.55654907131029,6.08929898229199,2.11204537257339,5.2958017715955,1.98475558249466,4.122156323537,4.52100394748536,4.04096597018644,1.79058516004705,2.29797259643086,4.95517422270746,15.0194494628513,2.73393409276564,4.12773735926445,2.59272338317596,3.95573759709851,3.00727300986255,2.97411625168479,3.22959016988325,1.81936888020755,2.76399947608848,0.954670618015114,5.53587988766987,4.47302827679067,4.42821897369385,5.43629569637619,2.62035076495413,4.98998081623837,3.47144514046411,1.83229159388821,2.85152941241944,2.4853572523477,28.7483398728937,5.23307911153926,5.46013018508422,5.05573089694524,4.39143399824286,4.89972763923257,8.33236394384853,5.85919731797776,8.80818493175971,8.21386010808421,15.5536203379247,4.10814456816632,3.24360344464263,2.67048488628551,2.98817892848929,2.14832034800978,2.78153896693771,3.36547258655913,3.54454865218985,4.34155734777035,3.96275394605999,4.83965688656834,3.70339946811059,3.75226182397285,4.67507608726276,8.61575457737803,3.10780334723691,2.51198798506532,3.18980771091749,4.82973985080476,4.69206188627955,2.93042598827624,3.00115730710692,3.00943262421218,18.6368108063632,15.1907328047368,18.9055519435001,22.5127668870231,15.7568979547248,13.5970901530146,17.550585006027,9.45674526770863,13.5942722695261,13.4617681055473,7.26511433089237,5.98537310101547,6.4878770186571,6.07766792670735,5.24032906569956,6.06683577885047,6.00066165064361,7.82933217507798,5.45562656306086,5.30664144703975,5.32306529769503,6.79054828989874,7.86588662747012,8.70742072706222,8.04096565378586,8.09699275181225,6.60540657885676,8.10218725947561,8.24171801606613,6.32955356577908,6.51451579532289,6.92155644021416,3.81497903915713,8.72078499793971,7.34053167239579,7.36147088657586,5.48783918618318,3.6829759601298,5.83957689537206,3.92799590160417,7.71127617807132,5.31924204828043,6.95692773388472,6.35241048862461,4.24394544158511,6.49507502638659,7.95367468714389,6.66100267549725,8.60797494309795,4.85301122062934,8.34724208233517
|short_description=p3@Sec23a
}}
}}

Latest revision as of 17:00, 26 September 2015

Short description:p3@Sec23a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sec23a_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 24bp_to_ENSMUST00000021375, ENSMUST00000134223, NM_009147, uc007npw.1_5end
EntrezGene:Sec23a
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Sec23a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.01
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.90
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I18.62
GP2+ M cell, pool3.CNhs13240.11847-124I26.90
Ileum epithelium, pool1.CNhs13199.10252-104B94.56
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.73
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C319.02
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C716.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.44
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.58
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D214.58
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.14
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.01
Mouse Schwann, donor1.CNhs12507.11728-123D93.10
Mouse Schwann, donor2.CNhs12573.11746-123F93.48
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.37
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F54.67
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I33.14
amnion, adult pregnant day17.5.CNhs10488.583-22A85.19
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F58.57
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C39.70
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.08
cerebellum, neonate N30.CNhs11135.1395-42I27.96
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A414.53
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F115.08
cortex, adult.CNhs10473.12-14D513.56
cortex, neonate N30.CNhs11107.1392-42F214.06
diencephalon, adult.CNhs10482.20-12F214.75
diencephalon, neonate N30.CNhs11201.1388-42B214.28
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.37
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.60
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C65.86
eyeball, embryo E14.CNhs10521.399-16E25.98
eyeball, embryo E15.CNhs10593.426-16C99.36
eyeball, embryo E17.CNhs11023.1261-18D48.59
eyeball, neonate N00.CNhs11207.633-15C69.25
eyeball, neonate N01.CNhs11140.1532-43E78.97
eyeball, neonate N02.CNhs11205.1551-44G811.81
eyeball, neonate N16.CNhs11188.777-19A29.31
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H27.56
forelimb, embryo E13.CNhs10589.384-1E27.92
forelimb, embryo E14.CNhs10577.413-26A87.45
forelimb, embryo E15.CNhs11007.437-20E77.23
forelimb, embryo E17.CNhs10598.1517-43C46.97
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I65.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E97.04
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I95.40
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C85.12
heart, embryo E16.CNhs11021.457-17C66.63
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G35.90
heart, neonate N00.CNhs11213.639-21E37.36
heart, neonate N03.CNhs11221.1349-25I26.75
heart, neonate N10.CNhs11118.749-24G15.75
heart, neonate N16.CNhs11209.782-15G16.08
heart, neonate N20.CNhs11127.821-26I68.04
heart, neonate N25.CNhs11196.1351-25D34.39
heart, neonate N30.CNhs11202.1390-42D27.52
hippocampus, adult.CNhs10478.13-16E89.46
hippocampus, neonate N00.CNhs11228.627-43G115.64
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I55.33
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D84.90
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F75.71
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E95.60
intestine, neonate N06.CNhs11102.688-20B85.78
intestine, neonate N07.CNhs11095.720-20F24.38
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G15.78
kidney, embryo E14.CNhs10606.411-4I93.98
kidney, embryo E15.CNhs10997.434-16F84.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G77.29
kidney, neonate N10.CNhs11206.758-6D55.06
kidney, neonate N20.CNhs11113.832-19I12.66
kidney, neonate N25.CNhs11122.1353-25F34.24
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H13.41
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G26.44
lung, embryo E14.CNhs10604.404-26F85.21
lung, embryo E15.CNhs11020.432-17C55.94
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C64.29
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E64.15
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C211.40
medulla oblongata, neonate N30.CNhs11200.1396-42A314.89
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.59
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.18
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I914.46
ovary, adult.CNhs10507.91-2I74.97
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I49.94
oviduct, adult pregnant day01.CNhs10500.988-6G64.12
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E66.84
pituitary gland, embryo E13.CNhs11009.370-44C75.56
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B96.56
pituitary gland, embryo E16.CNhs11036.449-43F65.89
pituitary gland, embryo E17.CNhs11039.1265-44F58.56
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G35.30
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C34.12
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H34.04
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C915.02
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D13.96
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.76
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E35.54
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D44.43
stomach, embryo E17.CNhs11006.1035-18D55.44
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B84.99
stomach, neonate N07.CNhs11210.718-18A93.47
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G528.75
testis, embryo E13.CNhs11031.389-23F55.23
testis, embryo E15.CNhs11034.443-27C55.46
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I54.39
testis, embryo E18.CNhs11027.503-18G54.90
testis, neonate N00.CNhs11189.1300-22B78.33
testis, neonate N07.CNhs11222.726-26I45.86
testis, neonate N10.CNhs11204.763-44D98.81
testis, neonate N20.CNhs11110.839-18H38.21
testis, neonate N30.CNhs11130.1391-42E215.55
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F83.37
thymus, neonate N03.CNhs11137.2104-43C73.54
thymus, neonate N06.CNhs11197.681-26C44.34
thymus, neonate N07.CNhs11211.713-19D33.96
thymus, neonate N10.CNhs11194.748-24E44.84
thymus, neonate N20.CNhs11186.820-7A23.70
thymus, neonate N25.CNhs11125.1362-25G73.75
thymus, neonate N30.CNhs11132.1393-42G24.68
tongue, adult.CNhs10499.32-1B48.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.51
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.19
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F54.69
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.64
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.51
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I87.27
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H26.49
whole body, embryo E14.5.CNhs10578.420-27D26.08
whole body, embryo E14.CNhs10519.395-14B15.24
whole body, embryo E16.CNhs10514.453-14F26.07
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.61
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.72
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.34
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.35
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B37.95
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C68.61
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B48.35





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.34e-1423
neuroblast (sensu Vertebrata)3.34e-1423
neuron2.35e-1033
neuronal stem cell2.35e-1033
neuroblast2.35e-1033
electrically signaling cell2.35e-1033
electrically responsive cell8.52e-0839
electrically active cell8.52e-0839

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest8.84e-2292
neurectoderm1.48e-2164
neural plate1.48e-2164
presumptive neural plate1.48e-2164
regional part of nervous system9.75e-2154
neural tube2.08e-1952
neural rod2.08e-1952
future spinal cord2.08e-1952
neural keel2.08e-1952
pre-chordal neural plate9.52e-1949
ecto-epithelium6.09e-1873
central nervous system7.15e-1873
gray matter3.36e-1734
nervous system5.37e-1775
brain1.12e-1647
future brain1.12e-1647
ectoderm-derived structure1.28e-1695
ectoderm1.28e-1695
presumptive ectoderm1.28e-1695
anterior neural tube2.34e-1640
regional part of brain3.98e-1646
regional part of forebrain8.48e-1639
forebrain8.48e-1639
future forebrain8.48e-1639
brain grey matter1.42e-1429
regional part of telencephalon1.42e-1429
telencephalon1.42e-1429
cerebral cortex8.12e-1021
cerebral hemisphere8.12e-1021
pallium8.12e-1021
regional part of cerebral cortex7.92e-0817
tube4.18e-07114
occipital lobe4.59e-0710
visual cortex4.59e-0710
neocortex4.59e-0710
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