Personal tools

FFCP PHASE1:Mm9::chr12:120477061..120477075,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr12:120477061..120477075,-
|DHSsupport=NA
|short_description=p9@Itgb8
|DPIdataset=NA
|description=CAGE_peak_9_at_Itgb8_5end
|association_with_transcript=167bp_to_ENSMUST00000137804_5end
|EntrezGene=320910
|EntrezGene=320910
|HGNC=
|HGNC=
|MCL_coexpression_id=283
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=167bp_to_ENSMUST00000137804_5end
|cluster_id=chr12:120477061..120477075,-
|description=CAGE_peak_9_at_Itgb8_5end
|id=chr12:120477061..120477075,-
|ontology_enrichment_celltype=CL:0000221!6.10e-09!44;CL:0000133!6.10e-09!44;CL:0002319!1.90e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000221,5.79e-11,44;CL:0000133,5.79e-11,44;CL:0002319,5.62e-10,43;CL:0000333,3.06e-09,10;CL:0000095,3.06e-09,10;CL:0000243,3.06e-09,10;CL:0000123,3.06e-09,10;CL:0000125,3.06e-09,10;CL:0000030,3.06e-09,10;CL:0000339,3.06e-09,10;CL:0002453,1.19e-08,8;CL:0002614,1.58e-07,3;CL:0000117,3.04e-07,23;CL:0000337,3.04e-07,23;CL:0002610,3.39e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.49e-20!102;UBERON:0000924!1.49e-20!102;UBERON:0006601!1.49e-20!102;UBERON:0000073!1.04e-18!75;UBERON:0001016!1.04e-18!75;UBERON:0001017!1.68e-17!73;UBERON:0005743!1.68e-17!73;UBERON:0000033!9.85e-16!63;UBERON:0002346!7.89e-15!71;UBERON:0003075!7.89e-15!71;UBERON:0007284!7.89e-15!71;UBERON:0001049!1.67e-13!52;UBERON:0005068!1.67e-13!52;UBERON:0006241!1.67e-13!52;UBERON:0007135!1.67e-13!52;UBERON:0000955!7.38e-13!50;UBERON:0006238!7.38e-13!50;UBERON:0002616!3.14e-12!49;UBERON:0002020!2.82e-11!34;UBERON:0003056!4.48e-10!49;UBERON:0002791!8.06e-09!29;UBERON:0003528!8.06e-09!29;UBERON:0001893!8.06e-09!29;UBERON:0003080!5.67e-08!40;UBERON:0002780!1.88e-07!39;UBERON:0001890!1.88e-07!39;UBERON:0006240!1.88e-07!39;UBERON:0003076!2.74e-07!12;UBERON:0003057!2.74e-07!12;UBERON:0002619!7.97e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.18e-26,75;UBERON:0001017,4.12e-25,73;UBERON:0004121,5.88e-23,95;UBERON:0000924,5.88e-23,95;UBERON:0006601,5.88e-23,95;UBERON:0000073,2.10e-21,54;UBERON:0001049,1.02e-18,52;UBERON:0005068,1.02e-18,52;UBERON:0006241,1.02e-18,52;UBERON:0007135,1.02e-18,52;UBERON:0000955,6.12e-16,47;UBERON:0006238,6.12e-16,47;UBERON:0002346,2.88e-15,64;UBERON:0003075,2.88e-15,64;UBERON:0007284,2.88e-15,64;UBERON:0002616,1.19e-14,46;UBERON:0010371,8.64e-14,73;UBERON:0003076,3.42e-13,12;UBERON:0003057,3.42e-13,12;UBERON:0002020,4.09e-11,34;UBERON:0010314,1.49e-09,92;UBERON:0004733,1.94e-09,6;UBERON:0004732,1.94e-09,6;UBERON:0002028,1.94e-09,6;UBERON:0007277,1.94e-09,6;UBERON:0002950,2.88e-09,4;UBERON:0001891,2.88e-09,4;UBERON:0009616,2.88e-09,4;UBERON:0010286,2.88e-09,4;UBERON:0003080,5.37e-09,40;UBERON:0003528,1.02e-08,29;UBERON:0002791,1.02e-08,29;UBERON:0001893,1.02e-08,29;UBERON:0002780,5.29e-08,39;UBERON:0001890,5.29e-08,39;UBERON:0006240,5.29e-08,39;UBERON:0003056,1.30e-07,49;UBERON:0002038,1.58e-07,3;UBERON:0009663,1.58e-07,3;UBERON:0009661,1.58e-07,3;UBERON:0000125,1.58e-07,3;UBERON:0002308,1.58e-07,3;UBERON:0004684,3.39e-07,3;UBERON:0002275,3.39e-07,3
|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70642765846759,0.878744730937887,2.91644848611425,2.2397827460058,1.43752564364972,0,0,0,0,0.286533439938757,0,0.404632921719196,2.64495489636016,0.633831403506179,0,0.889294796111139,0,0,0,2.09720077362883,4.61061966385865,0.207379224616955,0,0.210324961351382,2.57085885963423,2.87129103237098,0.122490799214954,0.0958454710182364,0,2.20231761998777,4.34136949489638,5.68344173048101,0.527545150920775,0.274462930807229,0,5.30447698102624,4.50210088025344,3.81995619442025,0.883885756421003,1.28134512719193,0.559198337475902,0.984440513331393,3.77857800533928,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,1.83096445709685,0,0,0,0,0,0.505524445014783,0.34255163915718,0,0.29688427812965,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0.125666591329675,1.73036477414062,0,0,0.323533699894818,0,0,0,2.92780797011547,5.02672096352292,0,0,0,0,2.84602214869163,1.83000241127451,0.251308704225729,1.39059456153821,1.53429274398198,2.49345653471472,2.43361894601636,0.712875546952214,0.124406970610093,0.252722758433675,0.210441855886474,0.910843100738926,0.459804208866946,0.540186389416048,0,0.748401490664606,0.896796041993948,1.3118241438362,0.776110112217047,0,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0,0,0.438599962275997,0,0,1.89260953707715,0.92614151141356,0,0,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0.350679099451593,0.885311519739602,1.62371162777562,1.41298855057237,1.60416313098341,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.651859905768103,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.664394068946325,0,0,0,0,0,0,0,0,5.77982123956051,5.50894926983355,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0,0,3.53453448063988,0.283880170416537,0.178065603667255,0.488660878060728,0.494910368917606,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.493647061806363,0.304464949114599,0.23467170806371,1.0591603543191,0.441056796109924,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,0,6.67531087237835,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.897099276263873,0.827292452285488,0.972255941720238,0.904118764344118,2.36538575687089,1.29092962510329,1.17183946359555,0.838874755405687,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.579568782096571,0.375364950902364,0.549454872801795,0.214368379079066,0.501572104035363,1.6942555278512,2.76195141904306,1.14579102687879,0.859265911718438,1.37016503954128,0.755393897389701,3.37511250115903,0.45032120322422,3.17199686288943,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0,0,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0.754505365544305,0.187283014939765,0,0.17230640686684,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0.476872379894642,0,0.282328141245992,0.338458431566706,0,0,0.271608227691724,1.68342681497322,0.237270036248348,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.231867835620421
|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70642765846759,0.878744730937887,2.91644848611425,2.2397827460058,1.43752564364972,0,0,0,0,0.286533439938757,0,0.404632921719196,2.64495489636016,0.633831403506179,0,0.889294796111139,0,0,0,2.09720077362883,4.61061966385865,0.207379224616955,0,0.210324961351382,2.57085885963423,2.87129103237098,0.122490799214954,0.0958454710182364,0,2.20231761998777,4.34136949489638,5.68344173048101,0.527545150920775,0.274462930807229,0,5.30447698102624,4.50210088025344,3.81995619442025,0.883885756421003,1.28134512719193,0.559198337475902,0.984440513331393,3.77857800533928,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,1.83096445709685,0,0,0,0,0,0.505524445014783,0.34255163915718,0,0.29688427812965,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0.125666591329675,1.73036477414062,0,0,0.323533699894818,0,0,0,2.92780797011547,5.02672096352292,0,0,0,0,2.84602214869163,1.83000241127451,0.251308704225729,1.39059456153821,1.53429274398198,2.49345653471472,2.43361894601636,0.712875546952214,0.124406970610093,0.252722758433675,0.210441855886474,0.910843100738926,0.459804208866946,0.540186389416048,0,0.748401490664606,0.896796041993948,1.3118241438362,0.776110112217047,0,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0,0,0.438599962275997,0,0,1.89260953707715,0.92614151141356,0,0,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0.350679099451593,0.885311519739602,1.62371162777562,1.41298855057237,1.60416313098341,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.651859905768103,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.664394068946325,0,0,0,0,0,0,0,0,5.77982123956051,5.50894926983355,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0,0,3.53453448063988,0.283880170416537,0.178065603667255,0.488660878060728,0.494910368917606,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.493647061806363,0.304464949114599,0.23467170806371,1.0591603543191,0.441056796109924,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,0.164140899745061,0,6.67531087237835,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.897099276263873,0.827292452285488,0.972255941720238,0.904118764344118,2.36538575687089,1.29092962510329,1.17183946359555,0.838874755405687,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.579568782096571,0.375364950902364,0.549454872801795,0.214368379079066,0.501572104035363,1.6942555278512,2.76195141904306,1.14579102687879,0.859265911718438,1.37016503954128,0.755393897389701,3.37511250115903,0.45032120322422,3.17199686288943,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0,0,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0.754505365544305,0.187283014939765,0,0.17230640686684,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0.476872379894642,0,0.282328141245992,0.338458431566706,0,0,0.271608227691724,1.68342681497322,0.237270036248348,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.231867835620421
|short_description=p9@Itgb8
}}
}}

Latest revision as of 11:02, 26 September 2015

Short description:p9@Itgb8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Itgb8_5end
Coexpression cluster:MCL_coexpression_mm9:283
Association with transcript: 167bp_to_ENSMUST00000137804_5end
EntrezGene:Itgb8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Itgb8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F93.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.78
medulla oblongata, neonate N30.CNhs11200.1396-42A35.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system4.18e-2675
central nervous system4.12e-2573
ectoderm-derived structure5.88e-2395
ectoderm5.88e-2395
presumptive ectoderm5.88e-2395
regional part of nervous system2.10e-2154
neural tube1.02e-1852
neural rod1.02e-1852
future spinal cord1.02e-1852
neural keel1.02e-1852
brain6.12e-1647
future brain6.12e-1647
neurectoderm2.88e-1564
neural plate2.88e-1564
presumptive neural plate2.88e-1564
regional part of brain1.19e-1446
ecto-epithelium8.64e-1473
posterior neural tube3.42e-1312
chordal neural plate3.42e-1312
gray matter4.09e-1134
structure with developmental contribution from neural crest1.49e-0992
segmental subdivision of hindbrain1.94e-096
segmental subdivision of nervous system1.94e-096
hindbrain1.94e-096
presumptive hindbrain1.94e-096
regional part of midbrain2.88e-094
midbrain2.88e-094
presumptive midbrain2.88e-094
midbrain neural tube2.88e-094
anterior neural tube5.37e-0940
brain grey matter1.02e-0829
regional part of telencephalon1.02e-0829
telencephalon1.02e-0829
regional part of forebrain5.29e-0839
forebrain5.29e-0839
future forebrain5.29e-0839
pre-chordal neural plate1.30e-0749
substantia nigra1.58e-073
telencephalic nucleus1.58e-073
midbrain nucleus1.58e-073
neural nucleus1.58e-073
nucleus of brain1.58e-073
raphe nuclei3.39e-073
reticular formation3.39e-073
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:120477061..120477075,-&oldid=4250053"