FFCP PHASE1:Mm9::chr12:109572551..109572616,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr12:109572551..109572616,+ to FFCP PHASE1:Mm9::chr12:109572551..109572616,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13116 | |EntrezGene=13116 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WVK8,Q3US73 | |UniProt=Q9WVK8,Q3US73 | ||
|association_with_transcript=0bp_to_ENSMUST00000021684,NM_010010,uc007ozo.1_5end | |||
|cluster_id=chr12:109572551..109572616,+ | |||
|description=CAGE_peak_1_at_Cyp46a1_5end | |||
|id=chr12:109572551..109572616,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.36e-10!43;CL:0000221!2.07e-10!44;CL:0000133!2.07e-10!44;CL:0000117!2.95e-09!23;CL:0000337!2.95e-09!23;CL:0000055!1.21e-08!50;CL:0000540!2.12e-07!33;CL:0000047!2.12e-07!33;CL:0000031!2.12e-07!33;CL:0000404!2.12e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.07e-11,43;CL:0000221,7.91e-11,44;CL:0000133,7.91e-11,44;CL:0000117,1.06e-09,23;CL:0000337,1.06e-09,23;CL:0000540,1.18e-07,33;CL:0000047,1.18e-07,33;CL:0000031,1.18e-07,33;CL:0000404,1.18e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.10e-28!73;UBERON:0005743!9.10e-28!73;UBERON:0000073!1.51e-27!75;UBERON:0001016!1.51e-27!75;UBERON:0004121!6.15e-27!102;UBERON:0000924!6.15e-27!102;UBERON:0006601!6.15e-27!102;UBERON:0000033!2.56e-26!63;UBERON:0002346!1.63e-24!71;UBERON:0003075!1.63e-24!71;UBERON:0007284!1.63e-24!71;UBERON:0001049!1.82e-24!52;UBERON:0005068!1.82e-24!52;UBERON:0006241!1.82e-24!52;UBERON:0007135!1.82e-24!52;UBERON:0000955!9.46e-24!50;UBERON:0006238!9.46e-24!50;UBERON:0002616!4.39e-23!49;UBERON:0003056!3.77e-21!49;UBERON:0003080!7.32e-18!40;UBERON:0002780!2.95e-17!39;UBERON:0001890!2.95e-17!39;UBERON:0006240!2.95e-17!39;UBERON:0002020!5.83e-17!34;UBERON:0002791!2.09e-14!29;UBERON:0003528!2.09e-14!29;UBERON:0001893!2.09e-14!29;UBERON:0007811!4.53e-11!86;UBERON:0000956!5.51e-11!21;UBERON:0001869!5.51e-11!21;UBERON:0000203!5.51e-11!21;UBERON:0000153!1.37e-09!94;UBERON:0002619!1.39e-09!17;UBERON:0004111!5.53e-09!122;UBERON:0000025!5.78e-09!114;UBERON:0002021!4.06e-08!10;UBERON:0000411!4.06e-08!10;UBERON:0001950!4.06e-08!10;UBERON:0003076!3.30e-07!12;UBERON:0003057!3.30e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.70e-29,73;UBERON:0001016,6.30e-29,75;UBERON:0004121,8.11e-29,95;UBERON:0000924,8.11e-29,95;UBERON:0006601,8.11e-29,95;UBERON:0002346,4.85e-28,64;UBERON:0003075,4.85e-28,64;UBERON:0007284,4.85e-28,64;UBERON:0000073,2.62e-27,54;UBERON:0001049,8.60e-26,52;UBERON:0005068,8.60e-26,52;UBERON:0006241,8.60e-26,52;UBERON:0007135,8.60e-26,52;UBERON:0010371,5.72e-25,73;UBERON:0000955,6.38e-23,47;UBERON:0006238,6.38e-23,47;UBERON:0003056,2.77e-22,49;UBERON:0002616,3.13e-22,46;UBERON:0003080,8.37e-19,40;UBERON:0002780,3.65e-18,39;UBERON:0001890,3.65e-18,39;UBERON:0006240,3.65e-18,39;UBERON:0002020,7.52e-18,34;UBERON:0010314,2.58e-17,92;UBERON:0003528,3.80e-15,29;UBERON:0002791,3.80e-15,29;UBERON:0001893,3.80e-15,29;UBERON:0000956,1.58e-11,21;UBERON:0001869,1.58e-11,21;UBERON:0000203,1.58e-11,21;UBERON:0002619,4.77e-10,17;UBERON:0002021,1.69e-08,10;UBERON:0000411,1.69e-08,10;UBERON:0001950,1.69e-08,10;UBERON:0003076,1.55e-07,12;UBERON:0003057,1.55e-07,12;UBERON:0004111,2.26e-07,122;UBERON:0000025,3.08e-07,114 | |||
|phase1_expression=3.52327463630547,0,0.454999239389536,0,0,0,0,0,0,0.468129052643987,0,0,0,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0,0.42438965179803,14.2022294552287,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612508068787107,0,0,0,0.588231488031014,0,0,1.25896817975577,1.72340783073175,0.550640256485045,8.60630478782843,11.9913836009246,14.7189742432096,15.9432517240912,3.07970127575798,12.9377307928474,0,0,0,0.771778308107841,0.286533439938757,2.06268836910977,4.24864567805155,3.1739458756322,5.70448263155561,2.03306719241479,2.66788438833342,0,1.97773272513395,0,15.579205746957,42.264013585371,4.45865332926454,5.13022565660425,2.73422449756797,20.8525218614777,18.1112203580323,2.32732518508413,1.72521847832825,2.75765635983006,66.0695285996332,72.781782708557,55.2983519722477,3.82470234417562,2.92760459527711,3.12548022334056,29.8725808931478,24.7615548413939,41.1027286519619,17.9723437138937,14.0947963991112,7.26957838718672,2.04460721999597,1.66257432234928,1.44932244350839,0.860423876981386,71.3969900393138,54.5100223554195,1.29955283489534,2.68816132258401,1.96622188184453,1.1930122580464,0.779358013808606,1.41335829804136,1.54927761754349,2.56652954828636,5.09610479413291,0,0,0,0,2.2836775943812,0,1.33597925158342,1.56136794089522,1.52232739156071,1.38369298353635,1.3565037649736,2.3517741427141,0.753999547978053,0.741584903203122,0.578397427679647,0,0.808834249737046,0.220841518460394,0.484875253135222,0,12.296793474485,18.6407569063975,0,0,0.599902730993408,0,53.1756769887121,83.7226103158087,8.92145900001337,92.1268897019065,104.076191133445,78.1283047543946,74.6309810111685,2.85150218780886,0.124406970610093,0.505445516867349,1.47309299120532,6.50602214813519,8.73627996847197,8.28285797104606,5.87748789559289,12.5187158438443,7.68682321709099,6.74652416830048,5.17406741478031,0,1.32374256117473,0.703804496655795,2.41115305670332,2.22437799380478,1.39300866608867,1.23469281844766,2.7864797354589,0,0,0,1.86413195281952,0.938104239924385,1.2604344302271,2.84093682702252,1.77087808572663,1.3884040159864,1.62773761325285,0.268273401399619,1.40118410840603,0.16455984991348,1.47750717671186,0.729619285912702,0.584799949701329,0,0.939444931322602,58.2503157522632,8.12946437796347,0,0.264450566663544,2.55945900642281,1.62565670302307,1.9330119198314,2.8235693447268,1.33426826306922,1.52180500890047,0.474529061544512,0.494096864172033,0.754005626400808,0.994782360205754,1.16978452271472,0.898819408654221,0.648414149624083,0.199141273254367,1.89667900953082,3.08470984046268,4.50830942692322,2.44381593414377,1.74557238450863,3.64706263429657,3.35153646758564,1.32849133181642,1.09899109488962,1.97435462274881,5.63259991465583,0.500535317148282,0.589676985339609,0.449724224769707,0.405720242777006,0,0.50925170356284,0,0.324270453550071,0.549122826376163,0,2.60498663367952,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,1.10851914099963,1.51593129416388,1.46668478797823,1.86719594352707,2.81628297946203,2.34508760418542,0.714130922658041,0.975668239288994,2.36452716159286,1.55025282754142,2.07291199254733,0.163863314715738,0.345369963731791,0.578596234326046,0,0,2.95058563811422,1.37968373152366,28.578005017827,24.1456074379939,0.163934945376675,1.00988370881749,1.89304931649754,0.390438744296638,1.72338718186239,1.67278158566786,2.00518806674155,1.98153571552183,1.21443210502468,1.46127928955656,1.18586333383957,58.4804795887689,1.98716119291576,5.34196811001766,5.53815661802159,1.97964147567043,1.32745138339963,1.69946445308487,1.209294227859,0.943025398779491,2.06711325016541,0.922305443831782,0,2.18120237686503,0.712994756769443,1.58018378967908,1.05418608574999,3.09406629744561,5.7874732978144,3.78128297465751,4.13947788104814,2.35770738534752,3.3694644392032,2.49716344642899,2.13913726782757,3.65357938937519,1.64270195644597,1.69465656691056,2.64634077665954,0.49465875882444,1.93757312035087,0.965006798850494,0.835606408021955,1.96969079694074,0.291480836629851,22.9927374493032,0.512612642393558,3.92135049130123,3.88908507476395,0.753473828018764,0.683471138605126,0.228778173206523,0.169978429993855,0.279902904647316,0.414599921413271,1.90934123603023,2.05618395827738,2.43983360552218,1.72808545314882,3.3454127362315,1.9652630737156,1.48350781023303,2.14898984885873,1.04702376793612,0.388844919875379,3.72803587852155,3.94585057078933,1.04661582230785,1.65458490457098,2.13896307178452,1.03327858782185,2.36538575687089,2.8165737274981,1.8228613878153,2.20204623293993,7.24752362478018,8.64090018773596,0.316011120628178,0.810900861160657,0.410843828659309,0.51968329191118,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.358855426437903,0.839423081820392,1.15913756419314,0.187682475451182,1.28206136987086,0.214368379079066,3.51100472824754,86.9717837630282,98.0492753760287,98.5380283115762,133.701775863389,96.5966352876606,96.6904188658817,87.077902529903,82.8591013932566,77.487351936299,86.9837323743057,0.31136204275253,4.38927360741134,1.87806966329548,1.94485373654635,0.838452650511929,1.65459157605013,2.00022055021454,2.06035057238894,4.1719497246936,2.02157769411038,1.77435509923168,3.01802146217722,2.62196220915671,2.43295579138503,2.23998328926892,5.23923060411381,2.54945517078682,2.31491064556446,0.412085900803307,1.61918812147837,2.40008476669791,1.95223386775271,4.05341522910446,1.74415699958794,2.54095327121393,2.45382362885862,1.82927972872773,1.57841826862706,2.30866993537965,3.92799590160417,2.13543032623513,2.56111654176465,2.45538625901814,3.09873682371932,2.89359916471712,5.74564329257276,2.33931608445408,3.65280791882107,2.48674831689496,1.98532277207564,1.62307484934295 | |phase1_expression=3.52327463630547,0,0.454999239389536,0,0,0,0,0,0,0.468129052643987,0,0,0,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0,0.42438965179803,14.2022294552287,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612508068787107,0,0,0,0.588231488031014,0,0,1.25896817975577,1.72340783073175,0.550640256485045,8.60630478782843,11.9913836009246,14.7189742432096,15.9432517240912,3.07970127575798,12.9377307928474,0,0,0,0.771778308107841,0.286533439938757,2.06268836910977,4.24864567805155,3.1739458756322,5.70448263155561,2.03306719241479,2.66788438833342,0,1.97773272513395,0,15.579205746957,42.264013585371,4.45865332926454,5.13022565660425,2.73422449756797,20.8525218614777,18.1112203580323,2.32732518508413,1.72521847832825,2.75765635983006,66.0695285996332,72.781782708557,55.2983519722477,3.82470234417562,2.92760459527711,3.12548022334056,29.8725808931478,24.7615548413939,41.1027286519619,17.9723437138937,14.0947963991112,7.26957838718672,2.04460721999597,1.66257432234928,1.44932244350839,0.860423876981386,71.3969900393138,54.5100223554195,1.29955283489534,2.68816132258401,1.96622188184453,1.1930122580464,0.779358013808606,1.41335829804136,1.54927761754349,2.56652954828636,5.09610479413291,0,0,0,0,2.2836775943812,0,1.33597925158342,1.56136794089522,1.52232739156071,1.38369298353635,1.3565037649736,2.3517741427141,0.753999547978053,0.741584903203122,0.578397427679647,0,0.808834249737046,0.220841518460394,0.484875253135222,0,12.296793474485,18.6407569063975,0,0,0.599902730993408,0,53.1756769887121,83.7226103158087,8.92145900001337,92.1268897019065,104.076191133445,78.1283047543946,74.6309810111685,2.85150218780886,0.124406970610093,0.505445516867349,1.47309299120532,6.50602214813519,8.73627996847197,8.28285797104606,5.87748789559289,12.5187158438443,7.68682321709099,6.74652416830048,5.17406741478031,0,1.32374256117473,0.703804496655795,2.41115305670332,2.22437799380478,1.39300866608867,1.23469281844766,2.7864797354589,0,0,0,1.86413195281952,0.938104239924385,1.2604344302271,2.84093682702252,1.77087808572663,1.3884040159864,1.62773761325285,0.268273401399619,1.40118410840603,0.16455984991348,1.47750717671186,0.729619285912702,0.584799949701329,0,0.939444931322602,58.2503157522632,8.12946437796347,0,0.264450566663544,2.55945900642281,1.62565670302307,1.9330119198314,2.8235693447268,1.33426826306922,1.52180500890047,0.474529061544512,0.494096864172033,0.754005626400808,0.994782360205754,1.16978452271472,0.898819408654221,0.648414149624083,0.199141273254367,1.89667900953082,3.08470984046268,4.50830942692322,2.44381593414377,1.74557238450863,3.64706263429657,3.35153646758564,1.32849133181642,1.09899109488962,1.97435462274881,5.63259991465583,0.500535317148282,0.589676985339609,0.449724224769707,0.405720242777006,0,0.50925170356284,0,0.324270453550071,0.549122826376163,0,2.60498663367952,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,1.10851914099963,1.51593129416388,1.46668478797823,1.86719594352707,2.81628297946203,2.34508760418542,0.714130922658041,0.975668239288994,2.36452716159286,1.55025282754142,2.07291199254733,0.163863314715738,0.345369963731791,0.578596234326046,0,0,2.95058563811422,1.37968373152366,28.578005017827,24.1456074379939,0.163934945376675,1.00988370881749,1.89304931649754,0.390438744296638,1.72338718186239,1.67278158566786,2.00518806674155,1.98153571552183,1.21443210502468,1.46127928955656,1.18586333383957,58.4804795887689,1.98716119291576,5.34196811001766,5.53815661802159,1.97964147567043,1.32745138339963,1.69946445308487,1.209294227859,0.943025398779491,2.06711325016541,0.922305443831782,0,2.18120237686503,0.712994756769443,1.58018378967908,1.05418608574999,3.09406629744561,5.7874732978144,3.78128297465751,4.13947788104814,2.35770738534752,3.3694644392032,2.49716344642899,2.13913726782757,3.65357938937519,1.64270195644597,1.69465656691056,2.64634077665954,0.49465875882444,1.93757312035087,0.965006798850494,0.835606408021955,1.96969079694074,0.291480836629851,22.9927374493032,0.512612642393558,3.92135049130123,3.88908507476395,0.753473828018764,0.683471138605126,0.228778173206523,0.169978429993855,0.279902904647316,0.414599921413271,1.90934123603023,2.05618395827738,2.43983360552218,1.72808545314882,3.3454127362315,1.9652630737156,1.48350781023303,2.14898984885873,1.04702376793612,0.388844919875379,3.72803587852155,3.94585057078933,1.04661582230785,1.65458490457098,2.13896307178452,1.03327858782185,2.36538575687089,2.8165737274981,1.8228613878153,2.20204623293993,7.24752362478018,8.64090018773596,0.316011120628178,0.810900861160657,0.410843828659309,0.51968329191118,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.358855426437903,0.839423081820392,1.15913756419314,0.187682475451182,1.28206136987086,0.214368379079066,3.51100472824754,86.9717837630282,98.0492753760287,98.5380283115762,133.701775863389,96.5966352876606,96.6904188658817,87.077902529903,82.8591013932566,77.487351936299,86.9837323743057,0.31136204275253,4.38927360741134,1.87806966329548,1.94485373654635,0.838452650511929,1.65459157605013,2.00022055021454,2.06035057238894,4.1719497246936,2.02157769411038,1.77435509923168,3.01802146217722,2.62196220915671,2.43295579138503,2.23998328926892,5.23923060411381,2.54945517078682,2.31491064556446,0.412085900803307,1.61918812147837,2.40008476669791,1.95223386775271,4.05341522910446,1.74415699958794,2.54095327121393,2.45382362885862,1.82927972872773,1.57841826862706,2.30866993537965,3.92799590160417,2.13543032623513,2.56111654176465,2.45538625901814,3.09873682371932,2.89359916471712,5.74564329257276,2.33931608445408,3.65280791882107,2.48674831689496,1.98532277207564,1.62307484934295 | ||
|short_description=p1@Cyp46a1 | |||
}} | }} |
Latest revision as of 06:52, 26 September 2015
Short description: | p1@Cyp46a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cyp46a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000021684, NM_010010, uc007ozo.1_5end |
EntrezGene: | Cyp46a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.07e-11 | 43 |
ectodermal cell | 7.91e-11 | 44 |
neurectodermal cell | 7.91e-11 | 44 |
CNS neuron (sensu Vertebrata) | 1.06e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-09 | 23 |
neuron | 1.18e-07 | 33 |
neuronal stem cell | 1.18e-07 | 33 |
neuroblast | 1.18e-07 | 33 |
electrically signaling cell | 1.18e-07 | 33 |