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FFCP PHASE1:Mm9::chr11:98602203..98602266,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:98602203..98602266,+
|DHSsupport=NA
|short_description=p4@Thra
|DPIdataset=NA
|description=CAGE_peak_4_at_Thra_5end
|association_with_transcript=0bp_to_ENSMUST00000124130_5end
|EntrezGene=21833
|EntrezGene=21833
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000124130_5end
|cluster_id=chr11:98602203..98602266,+
|description=CAGE_peak_4_at_Thra_5end
|id=chr11:98602203..98602266,+
|ontology_enrichment_celltype=CL:0000117!1.91e-12!23;CL:0000337!1.91e-12!23;CL:0000540!1.10e-07!33;CL:0000047!1.10e-07!33;CL:0000031!1.10e-07!33;CL:0000404!1.10e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.25e-16,23;CL:0000337,2.25e-16,23;CL:0000540,1.10e-09,33;CL:0000047,1.10e-09,33;CL:0000031,1.10e-09,33;CL:0000404,1.10e-09,33;CL:0000393,5.16e-07,39;CL:0000211,5.16e-07,39;CL:0002609,6.58e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!2.29e-17!34;UBERON:0002791!4.87e-14!29;UBERON:0003528!4.87e-14!29;UBERON:0001893!4.87e-14!29;UBERON:0002346!1.58e-13!71;UBERON:0003075!1.58e-13!71;UBERON:0007284!1.58e-13!71;UBERON:0001049!3.39e-13!52;UBERON:0005068!3.39e-13!52;UBERON:0006241!3.39e-13!52;UBERON:0007135!3.39e-13!52;UBERON:0000955!7.69e-12!50;UBERON:0006238!7.69e-12!50;UBERON:0003056!8.01e-12!49;UBERON:0001017!1.08e-11!73;UBERON:0005743!1.08e-11!73;UBERON:0000033!1.19e-11!63;UBERON:0002616!2.00e-11!49;UBERON:0002780!2.00e-11!39;UBERON:0001890!2.00e-11!39;UBERON:0006240!2.00e-11!39;UBERON:0003080!2.29e-11!40;UBERON:0000956!1.16e-10!21;UBERON:0001869!1.16e-10!21;UBERON:0000203!1.16e-10!21;UBERON:0004121!1.43e-10!102;UBERON:0000924!1.43e-10!102;UBERON:0006601!1.43e-10!102;UBERON:0000073!1.66e-10!75;UBERON:0001016!1.66e-10!75;UBERON:0002619!3.54e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.87e-23,34;UBERON:0003528,4.10e-18,29;UBERON:0002791,4.10e-18,29;UBERON:0001893,4.10e-18,29;UBERON:0000073,7.36e-17,54;UBERON:0010314,3.39e-16,92;UBERON:0001049,2.15e-15,52;UBERON:0005068,2.15e-15,52;UBERON:0006241,2.15e-15,52;UBERON:0007135,2.15e-15,52;UBERON:0002346,1.36e-14,64;UBERON:0003075,1.36e-14,64;UBERON:0007284,1.36e-14,64;UBERON:0000956,3.50e-14,21;UBERON:0001869,3.50e-14,21;UBERON:0000203,3.50e-14,21;UBERON:0002780,4.31e-14,39;UBERON:0001890,4.31e-14,39;UBERON:0006240,4.31e-14,39;UBERON:0001017,6.52e-14,73;UBERON:0003080,1.83e-13,40;UBERON:0001016,4.00e-13,75;UBERON:0003056,4.04e-13,49;UBERON:0010371,1.31e-12,73;UBERON:0000955,1.35e-12,47;UBERON:0006238,1.35e-12,47;UBERON:0002616,4.85e-12,46;UBERON:0004121,2.01e-11,95;UBERON:0000924,2.01e-11,95;UBERON:0006601,2.01e-11,95;UBERON:0002619,1.33e-10,17;UBERON:0002021,9.86e-09,10;UBERON:0000411,9.86e-09,10;UBERON:0001950,9.86e-09,10
|phase1_expression=0.80074423552397,0,0,0.30246421130683,0.500895729946347,0.16787927191189,0.700837921786577,0,0.140788722151667,0,0,0.0797721589953364,0,0,0.333109761815663,0.809901069559304,0,0,0,0,0.765389611359628,0.794327609607082,0.522399578277871,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0.950117097281869,0.252030129759931,0,1.90509202037889,3.07532393792285,0,2.02196133825892,0.997407872150954,1.22501613757421,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0.436050312760893,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,0,6.06949382578793,5.28990979272033,3.1691570175309,0.338844532069132,0,0,0,0,0.898800331555214,1.15265491596466,6.32506635081714,8.10035629990144,6.52007380189284,6.85562362569129,5.52171352379034,4.28717797252339,4.2172007248024,3.67687514644008,1.10115880999389,1.53224805702225,1.0752457327937,8.70449499019279,9.69769022185542,8.85552729946492,1.11673199600552,1.12552522006336,0.916789486660861,8.2496003932627,5.69486723196412,4.84638559145781,0,0,0.579728977403356,0,0.679971333707751,0,0,0,0.140444420131752,0.511290967734173,0.779358013808606,1.41335829804136,0.563373679106722,2.56652954828636,0,0,0,0,0,0.11418387971906,0,0.148442139064825,1.56136794089522,0.913396434936424,0.922461989024234,1.20578112442098,0.587943535678524,0.125666591329675,0.247194967734374,0,0.884610551949874,0.323533699894818,0.220841518460394,0.969750506270444,0,1.46390398505774,1.46612694769419,0.255457055208591,0.11981512450592,0.599902730993408,0.381210681219194,0.748953197024114,2.74500361691176,11.4345460422707,3.47648640384553,3.3243009452943,0.62336413367868,2.59586020908412,0.611036183101898,0.622034853050465,0,0.210441855886474,0.390361328888111,1.14951052216736,0.720248519221397,1.35634336052144,1.08858398642125,1.5373646434182,2.71735001223214,0.776110112217047,0.431135985865684,0.189106080167819,0,0.43839146485515,0,0.348252166522167,0.61734640922383,0.398068533636986,0,0,0,0.414251545071004,1.40715635988658,1.2604344302271,2.3674473558521,3.54175617145327,1.54267112887378,2.79040733700489,4.02410102099429,2.33530684734339,2.63295759861569,1.31333971263276,0.405344047729279,1.31579988682799,1.3173006917463,1.07365135008297,1.89260953707715,17.0821656549612,0.330418782983798,0,0.853153002140936,1.16118335930219,1.15980715189884,1.00841762311671,0.667134131534611,0.760902504450237,0.949058123089023,0.823494773620054,1.25667604400135,2.18852119245266,0.19496408711912,1.79763881730844,0.864552199498777,0.796565093017469,0.189667900953082,0.571242563048644,1.1270773567308,0,0.387904974335251,0.49095073923223,0.505892296994058,0.295220295959204,0.470996183524124,0.740382983530803,0.296452627087149,0.333690211432188,0.786235980452812,0.674586337154561,0.405720242777006,0.482354319504834,0.50925170356284,0.575392274901621,0.810676133875177,0.549122826376163,0,0.744281895337007,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0.37898282354097,0.977789858652155,0.169745085775188,0,0.335012514883631,0,0.195133647857799,0.630540576424764,0.664394068946325,0.478364305972461,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0,0.642202359951168,0.937693492737625,0.491804836130026,0,0.94652465824877,1.17131623288992,0.430846795465598,0,0,0,0.404810701674894,0.584511715822624,0,2.24924921495265,0,0.178065603667255,0.81443479676788,0.164970122972535,0,1.21390318077491,1.209294227859,0.943025398779491,0.885905678642318,0.307435147943927,0.258428293168221,0.363533729477506,1.42598951353889,0.632073515871632,0,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0.532020700926821,0.356737635204141,2.13913726782757,1.2178597964584,0,0,0,0.8244312647074,0.322928853391811,0.784068024066026,1.55184047204077,2.1338316966858,1.1659233465194,0.18542530201051,1.02522528478712,0.412773735926445,0.740778109478847,0.565105371014073,0.27338845544205,0.686334519619568,0,0.279902904647316,0.138199973804424,0,0.316335993581135,0.813277868507395,0.972048067396211,0.627264888043406,0.655087691238533,0.809186078308924,0.743881101528023,1.04702376793612,0.648074866458964,0,0,0.448549638131936,0.330916980914195,1.16670713006429,0.645799117388655,0.844780627453891,0.352071715937262,0.651021924219751,0.524296722128554,0.241584120826006,0,0,0.405450430580328,0.205421914329655,0.389762468933385,0.537080087002444,0.198681354781265,0,0,0.100966449948148,0.228620419965,0.201652370273681,0.194915761479505,0.384847366561318,0.350630706544707,0.680191150845634,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,2.82375921308533,5.06357760157895,2.29158205375759,3.60891682921744,2.05524755931193,6.0431511791176,3.37511250115903,2.70192721934532,2.26571204492102,3.10656187051092,0.31136204275253,0.798049746802062,1.19513524027894,1.70174701947806,1.04806581313991,1.65459157605013,1.77797382241292,1.44224540067226,0.962757628775446,1.26348605881899,1.2673964994512,1.50901073108861,2.1537546718073,1.85672941974121,1.83793500657962,3.81034953026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|phase1_expression=0.80074423552397,0,0,0.30246421130683,0.500895729946347,0.16787927191189,0.700837921786577,0,0.140788722151667,0,0,0.0797721589953364,0,0,0.333109761815663,0.809901069559304,0,0,0,0,0.765389611359628,0.794327609607082,0.522399578277871,0.47997726838022,0.22940928106717,0,0,0.215471232685889,0.950117097281869,0.252030129759931,0,1.90509202037889,3.07532393792285,0,2.02196133825892,0.997407872150954,1.22501613757421,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0.436050312760893,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,0,6.06949382578793,5.28990979272033,3.1691570175309,0.338844532069132,0,0,0,0,0.898800331555214,1.15265491596466,6.32506635081714,8.10035629990144,6.52007380189284,6.85562362569129,5.52171352379034,4.28717797252339,4.2172007248024,3.67687514644008,1.10115880999389,1.53224805702225,1.0752457327937,8.70449499019279,9.69769022185542,8.85552729946492,1.11673199600552,1.12552522006336,0.916789486660861,8.2496003932627,5.69486723196412,4.84638559145781,0,0,0.579728977403356,0,0.679971333707751,0,0,0,0.140444420131752,0.511290967734173,0.779358013808606,1.41335829804136,0.563373679106722,2.56652954828636,0,0,0,0,0,0.11418387971906,0,0.148442139064825,1.56136794089522,0.913396434936424,0.922461989024234,1.20578112442098,0.587943535678524,0.125666591329675,0.247194967734374,0,0.884610551949874,0.323533699894818,0.220841518460394,0.969750506270444,0,1.46390398505774,1.46612694769419,0.255457055208591,0.11981512450592,0.599902730993408,0.381210681219194,0.748953197024114,2.74500361691176,11.4345460422707,3.47648640384553,3.3243009452943,0.62336413367868,2.59586020908412,0.611036183101898,0.622034853050465,0,0.210441855886474,0.390361328888111,1.14951052216736,0.720248519221397,1.35634336052144,1.08858398642125,1.5373646434182,2.71735001223214,0.776110112217047,0.431135985865684,0.189106080167819,0,0.43839146485515,0,0.348252166522167,0.61734640922383,0.398068533636986,0,0,0,0.414251545071004,1.40715635988658,1.2604344302271,2.3674473558521,3.54175617145327,1.54267112887378,2.79040733700489,4.02410102099429,2.33530684734339,2.63295759861569,1.31333971263276,0.405344047729279,1.31579988682799,1.3173006917463,1.07365135008297,1.89260953707715,17.0821656549612,0.330418782983798,0,0.853153002140936,1.16118335930219,1.15980715189884,1.00841762311671,0.667134131534611,0.760902504450237,0.949058123089023,0.823494773620054,1.25667604400135,2.18852119245266,0.19496408711912,1.79763881730844,0.864552199498777,0.796565093017469,0.189667900953082,0.571242563048644,1.1270773567308,0,0.387904974335251,0.49095073923223,0.505892296994058,0.295220295959204,0.470996183524124,0.740382983530803,0.296452627087149,0.333690211432188,0.786235980452812,0.674586337154561,0.405720242777006,0.482354319504834,0.50925170356284,0.575392274901621,0.810676133875177,0.549122826376163,0,0.744281895337007,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0.37898282354097,0.977789858652155,0.169745085775188,0,0.335012514883631,0,0.195133647857799,0.630540576424764,0.664394068946325,0.478364305972461,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0,0.642202359951168,0.937693492737625,0.491804836130026,0,0.94652465824877,1.17131623288992,0.430846795465598,0,0,0,0.404810701674894,0.584511715822624,0,2.24924921495265,0,0.178065603667255,0.81443479676788,0.164970122972535,0,1.21390318077491,1.209294227859,0.943025398779491,0.885905678642318,0.307435147943927,0.258428293168221,0.363533729477506,1.42598951353889,0.632073515871632,0,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0.532020700926821,0.356737635204141,2.13913726782757,1.2178597964584,0,0,0,0.8244312647074,0.322928853391811,0.784068024066026,1.55184047204077,2.1338316966858,1.1659233465194,0.18542530201051,1.02522528478712,0.412773735926445,0.740778109478847,0.565105371014073,0.27338845544205,0.686334519619568,0,0.279902904647316,0.138199973804424,0,0.316335993581135,0.813277868507395,0.972048067396211,0.627264888043406,0.655087691238533,0.809186078308924,0.743881101528023,1.04702376793612,0.648074866458964,0,0,0.448549638131936,0.330916980914195,1.16670713006429,0.645799117388655,0.844780627453891,0.352071715937262,0.651021924219751,0.524296722128554,0.241584120826006,0,0,0.405450430580328,0.205421914329655,0.389762468933385,0.537080087002444,0.198681354781265,0,0,0.100966449948148,0.228620419965,0.201652370273681,0.194915761479505,0.384847366561318,0.350630706544707,0.680191150845634,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,2.82375921308533,5.06357760157895,2.29158205375759,3.60891682921744,2.05524755931193,6.0431511791176,3.37511250115903,2.70192721934532,2.26571204492102,3.10656187051092,0.31136204275253,0.798049746802062,1.19513524027894,1.70174701947806,1.04806581313991,1.65459157605013,1.77797382241292,1.44224540067226,0.962757628775446,1.26348605881899,1.2673964994512,1.50901073108861,2.1537546718073,1.85672941974121,1.83793500657962,3.81034953026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|short_description=p4@Thra
}}
}}

Latest revision as of 03:19, 26 September 2015

Short description:p4@Thra
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Thra_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_ENSMUST00000124130_5end
EntrezGene:Thra
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Thra

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.07
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.10
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.70
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.70
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F111.43
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C83.54
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E32.34
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G117.08
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter6.87e-2334
brain grey matter4.10e-1829
regional part of telencephalon4.10e-1829
telencephalon4.10e-1829
regional part of nervous system7.36e-1754
structure with developmental contribution from neural crest3.39e-1692
neural tube2.15e-1552
neural rod2.15e-1552
future spinal cord2.15e-1552
neural keel2.15e-1552
neurectoderm1.36e-1464
neural plate1.36e-1464
presumptive neural plate1.36e-1464
cerebral cortex3.50e-1421
cerebral hemisphere3.50e-1421
pallium3.50e-1421
regional part of forebrain4.31e-1439
forebrain4.31e-1439
future forebrain4.31e-1439
central nervous system6.52e-1473
anterior neural tube1.83e-1340
nervous system4.00e-1375
pre-chordal neural plate4.04e-1349
ecto-epithelium1.31e-1273
brain1.35e-1247
future brain1.35e-1247
regional part of brain4.85e-1246
ectoderm-derived structure2.01e-1195
ectoderm2.01e-1195
presumptive ectoderm2.01e-1195
regional part of cerebral cortex1.33e-1017
occipital lobe9.86e-0910
visual cortex9.86e-0910
neocortex9.86e-0910
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