FFCP PHASE1:Mm9::chr11:97660941..97660961,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:97660941..97660961,+ to FFCP PHASE1:Mm9::chr11:97660941..97660961,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16796 | |EntrezGene=16796 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q543N3,Q61792 | |UniProt=Q543N3,Q61792 | ||
|association_with_transcript=-24bp_to_ENSMUST00000107569,NM_010688,uc007lew.1_5end | |||
|cluster_id=chr11:97660941..97660961,+ | |||
|description=CAGE_peak_2_at_Lasp1_5end | |||
|id=chr11:97660941..97660961,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.80e-14!23;CL:0000337!4.80e-14!23;CL:0000221!6.64e-13!44;CL:0000133!6.64e-13!44;CL:0002319!1.04e-12!43;CL:0000055!2.55e-11!50;CL:0000540!6.12e-09!33;CL:0000047!6.12e-09!33;CL:0000031!6.12e-09!33;CL:0000404!6.12e-09!33;CL:0000393!1.50e-08!39;CL:0000211!1.50e-08!39;CL:0002321!5.72e-08!70;CL:0000220!5.72e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.49e-15,23;CL:0000337,4.49e-15,23;CL:0000221,1.17e-13,44;CL:0000133,1.17e-13,44;CL:0002319,1.90e-13,43;CL:0000540,2.21e-09,33;CL:0000047,2.21e-09,33;CL:0000031,2.21e-09,33;CL:0000404,2.21e-09,33;CL:0002321,3.40e-09,70;CL:0000393,5.52e-09,39;CL:0000211,5.52e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.32e-21!75;UBERON:0001016!4.32e-21!75;UBERON:0001017!1.79e-20!73;UBERON:0005743!1.79e-20!73;UBERON:0001049!4.86e-19!52;UBERON:0005068!4.86e-19!52;UBERON:0006241!4.86e-19!52;UBERON:0007135!4.86e-19!52;UBERON:0000955!2.35e-17!50;UBERON:0006238!2.35e-17!50;UBERON:0002020!3.41e-17!34;UBERON:0002616!3.50e-17!49;UBERON:0004121!1.49e-16!102;UBERON:0000924!1.49e-16!102;UBERON:0006601!1.49e-16!102;UBERON:0002346!3.10e-16!71;UBERON:0003075!3.10e-16!71;UBERON:0007284!3.10e-16!71;UBERON:0007811!4.49e-16!86;UBERON:0000033!9.77e-15!63;UBERON:0003080!1.95e-14!40;UBERON:0002780!3.56e-14!39;UBERON:0001890!3.56e-14!39;UBERON:0006240!3.56e-14!39;UBERON:0002791!4.53e-14!29;UBERON:0003528!4.53e-14!29;UBERON:0001893!4.53e-14!29;UBERON:0000153!5.41e-14!94;UBERON:0003056!1.01e-12!49;UBERON:0000956!9.28e-11!21;UBERON:0001869!9.28e-11!21;UBERON:0000203!9.28e-11!21;UBERON:0002619!4.58e-09!17;UBERON:0000064!8.43e-08!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.08e-22,75;UBERON:0001017,2.34e-21,73;UBERON:0000073,2.41e-21,54;UBERON:0001049,6.11e-20,52;UBERON:0005068,6.11e-20,52;UBERON:0006241,6.11e-20,52;UBERON:0007135,6.11e-20,52;UBERON:0002346,3.90e-18,64;UBERON:0003075,3.90e-18,64;UBERON:0007284,3.90e-18,64;UBERON:0002020,4.73e-18,34;UBERON:0004121,3.75e-17,95;UBERON:0000924,3.75e-17,95;UBERON:0006601,3.75e-17,95;UBERON:0000955,1.19e-16,47;UBERON:0006238,1.19e-16,47;UBERON:0002616,1.83e-16,46;UBERON:0003080,5.63e-15,40;UBERON:0002780,1.08e-14,39;UBERON:0001890,1.08e-14,39;UBERON:0006240,1.08e-14,39;UBERON:0003528,1.10e-14,29;UBERON:0002791,1.10e-14,29;UBERON:0001893,1.10e-14,29;UBERON:0010371,1.12e-14,73;UBERON:0003056,2.90e-13,49;UBERON:0000956,1.62e-11,21;UBERON:0001869,1.62e-11,21;UBERON:0000203,1.62e-11,21;UBERON:0010314,5.02e-10,92;UBERON:0002619,1.10e-09,17 | |||
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| ||
|short_description=p2@Lasp1 | |||
}} | }} |
Latest revision as of 02:34, 26 September 2015
Short description: | p2@Lasp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lasp1_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENSMUST00000107569, NM_010688, uc007lew.1_5end |
EntrezGene: | Lasp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.49e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.49e-15 | 23 |
ectodermal cell | 1.17e-13 | 44 |
neurectodermal cell | 1.17e-13 | 44 |
neural cell | 1.90e-13 | 43 |
neuron | 2.21e-09 | 33 |
neuronal stem cell | 2.21e-09 | 33 |
neuroblast | 2.21e-09 | 33 |
electrically signaling cell | 2.21e-09 | 33 |
embryonic cell | 3.40e-09 | 70 |
electrically responsive cell | 5.52e-09 | 39 |
electrically active cell | 5.52e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.08e-22 | 75 |
central nervous system | 2.34e-21 | 73 |
regional part of nervous system | 2.41e-21 | 54 |
neural tube | 6.11e-20 | 52 |
neural rod | 6.11e-20 | 52 |
future spinal cord | 6.11e-20 | 52 |
neural keel | 6.11e-20 | 52 |
neurectoderm | 3.90e-18 | 64 |
neural plate | 3.90e-18 | 64 |
presumptive neural plate | 3.90e-18 | 64 |
gray matter | 4.73e-18 | 34 |
ectoderm-derived structure | 3.75e-17 | 95 |
ectoderm | 3.75e-17 | 95 |
presumptive ectoderm | 3.75e-17 | 95 |
brain | 1.19e-16 | 47 |
future brain | 1.19e-16 | 47 |
regional part of brain | 1.83e-16 | 46 |
anterior neural tube | 5.63e-15 | 40 |
regional part of forebrain | 1.08e-14 | 39 |
forebrain | 1.08e-14 | 39 |
future forebrain | 1.08e-14 | 39 |
brain grey matter | 1.10e-14 | 29 |
regional part of telencephalon | 1.10e-14 | 29 |
telencephalon | 1.10e-14 | 29 |
ecto-epithelium | 1.12e-14 | 73 |
pre-chordal neural plate | 2.90e-13 | 49 |
cerebral cortex | 1.62e-11 | 21 |
cerebral hemisphere | 1.62e-11 | 21 |
pallium | 1.62e-11 | 21 |
structure with developmental contribution from neural crest | 5.02e-10 | 92 |
regional part of cerebral cortex | 1.10e-09 | 17 |