FFCP PHASE1:Mm9::chr11:60230806..60230832,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:60230806..60230832,+ to FFCP PHASE1:Mm9::chr11:60230806..60230832,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66771 | |EntrezGene=66771 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9CPY6 | |UniProt=Q9CPY6 | ||
|association_with_transcript=42bp_to_ENSMUST00000070681_5end | |||
|cluster_id=chr11:60230806..60230832,+ | |||
|description=CAGE_peak_3_at_4933439F18Rik_5end | |||
|id=chr11:60230806..60230832,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.24e-07!33;CL:0000047!1.24e-07!33;CL:0000031!1.24e-07!33;CL:0000404!1.24e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.24e-07,33;CL:0000047,1.24e-07,33;CL:0000031,1.24e-07,33;CL:0000404,1.24e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.17e-11!102;UBERON:0000924!8.17e-11!102;UBERON:0006601!8.17e-11!102;UBERON:0000033!4.07e-09!63;UBERON:0007811!2.25e-08!86;UBERON:0000073!2.63e-08!75;UBERON:0001016!2.63e-08!75;UBERON:0000153!3.13e-08!94;UBERON:0002020!6.54e-08!34;UBERON:0001017!7.54e-08!73;UBERON:0005743!7.54e-08!73;UBERON:0002346!8.72e-07!71;UBERON:0003075!8.72e-07!71;UBERON:0007284!8.72e-07!71;UBERON:0000475!9.27e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.22e-12,95;UBERON:0000924,7.22e-12,95;UBERON:0006601,7.22e-12,95;UBERON:0010371,1.06e-09,73;UBERON:0001016,2.58e-08,75;UBERON:0010314,4.67e-08,92;UBERON:0002020,6.52e-08,34;UBERON:0001017,7.40e-08,73;UBERON:0002346,9.17e-08,64;UBERON:0003075,9.17e-08,64;UBERON:0007284,9.17e-08,64;UBERON:0000073,5.89e-07,54 | |||
|phase1_expression=6.88640042550614,0.697950815278722,1.81999695755814,1.20985684522732,1.50268718983904,2.01455126294268,2.10251376535973,3.48632973292256,3.94208422024667,1.17032263160997,10.7867319982068,8.37607669451032,4.10881751834894,3.67165690159789,2.6648780945253,1.41732687172878,1.39912375625629,1.73504190947031,1.91960207048034,1.69755860719212,4.76242424845991,4.17021995043718,1.30599894569468,0.799962113967033,0.91763712426868,0,0.86152399231815,1.07735616342945,0.950117097281869,1.76421090831952,0.443461021310609,1.27006134691926,1.84519436275371,0,8.95440021228951,6.64938581433969,11.8418226632174,0,0,0.523523743973798,0.588231488031014,0,0.971020706062307,2.39203954153597,2.23029248682932,2.38610777810186,0.782391344348039,1.09012578190223,2.19686182734472,1.36100929351998,1.1198913730029,0,3.35565212115473,3.62681071005672,3.02484419228218,1.54355661621568,1.71920063963254,3.09403255366465,4.65327859977075,4.23192783417626,1.90149421051854,1.35537812827653,0.889294796111139,2.6996991518442,1.97773272513395,3.5524005747305,3.59520132622086,4.2264013585371,7.77672092313582,7.2903206699113,7.15104868594699,6.28432165688368,8.1721360152097,6.00204916153275,7.66763768145891,1.83843757322004,5.50579404996943,8.93811366596314,9.06278546211836,4.08847491963601,4.02545631850602,6.77187381723788,5.58365998002762,6.19038871034848,5.19514042441154,5.00868595305235,5.83723891276322,4.65998614563251,6.81535739998656,4.1564358058732,2.6087803983151,3.44169550792555,6.79971333707751,5.93673510801599,1.94932925234301,4.03224198387602,3.23022166303029,1.53387290320252,3.11743205523443,0.35333957451034,8.45060518660083,5.13305909657271,2.54805239706646,0,0.432982082022428,1.26679932737549,0,4.45317130904334,2.84831672011889,3.11728492036132,3.46970653532272,1.52232739156071,3.22861696158482,1.50722640552623,3.52766121407114,6.28332956648377,0.494389935468748,8.96516012903452,2.65383165584962,3.23533699894818,4.19598885074748,2.42437626567611,0,7.61230072230023,9.00620839297857,2.29911349687732,3.47463861067169,1.79970819298022,3.04968544975355,4.19413790333504,3.66000482254901,6.15706325353036,4.17178368461463,6.64860189058859,6.64921742590592,5.84068547043927,4.48093200941392,4.60305791257344,3.28539585963777,7.15502310014011,5.33493816147085,4.36813998423599,4.68161537493908,4.52114453507145,4.83059143974428,6.40568601424249,4.96619140166563,4.9153640440413,3.44908788692548,3.02569728268511,2.81521798662318,3.5071317188412,3.89266148915837,6.268538997399,4.32142486456681,4.77682240364384,4.21327912387941,2.83082697826187,2.27330799516474,3.31401236056803,2.34526059981096,2.70093092191522,3.78791576936336,2.95146347621106,4.01094493507183,5.34828072925938,4.56064782379353,3.26942958628075,5.59503489705834,4.76085645829376,5.99909190639332,7.01759939641595,8.34290438105992,6.71032093801859,6.72927835405207,6.17427674275707,1.32167513193519,2.64450566663544,4.69234151177515,4.18026009348789,3.35055399437443,2.8235693447268,2.2237804384487,2.47293313946327,2.37264530772256,1.31759163779209,3.2673577144035,1.98956472041151,4.28920991662064,3.59527763461689,2.80979464837102,3.38540164532424,4.93136542478012,3.99869794134051,5.63538678365402,4.2766778847516,5.04276466635827,3.08597607517402,2.71917109634306,2.06654207171443,2.66897837330337,2.96153193412321,2.96452627087149,2.8363667971736,2.35870794135844,2.47348323623339,2.63718157805054,1.4470629585145,1.78238096246994,2.30156909960649,2.10775794807546,2.19649130550465,7.18841032636773,2.97712758134803,3.74445207737473,3.28352541331245,3.40855085691633,6.75420929908714,4.0645701836653,2.27389694124582,2.44447464663039,2.8856664581782,4.22442446919304,3.35012514883632,2.14239276797412,1.95133647857799,3.31033802623001,1.99318220683897,3.98636921643718,6.39066927391378,5.00786447411097,5.49666422609744,1.50791283939272,0,5.90117127622843,5.51873492609465,4.65596710964597,6.44664276257117,3.11476396215683,8.07906967053994,2.2085575359138,2.73307121007647,5.17016154558717,5.4962823529087,7.5751549188014,5.09537755419898,3.64329631507405,6.42962887404886,5.13874111330481,6.42642632843614,3.97432238583152,5.52003371368491,6.51547837414304,2.8044920905331,29.2039304347918,3.15614827001476,2.41858845571801,3.77210159511796,5.02013217897314,6.7635732547664,2.58428293168221,5.45300594216258,6.06045543254026,13.5895805912401,12.6502330289999,12.3762651897824,1.70219802876894,3.6012218806262,2.19909762430683,2.14337035031592,1.95074257006501,2.14042581122485,2.79733335023606,3.34911444026059,1.64270195644597,1.27099242518292,3.52845436887939,5.27636009412736,3.22928853391811,4.16159182004275,4.65552141612232,4.76008609260678,4.08073171281791,8.90041449650446,3.07567585436135,3.714963623338,2.96311243791539,3.39063222608444,2.46049609897845,3.43167259809784,4.07948231985253,3.91864066506242,5.2515990045681,0.954670618015114,2.68885594543965,4.67634774391752,4.10420295122845,3.13632444021703,3.9305261474312,3.10187996685088,2.39695021603474,2.35580347785627,3.88844919875379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| |phase1_expression=6.88640042550614,0.697950815278722,1.81999695755814,1.20985684522732,1.50268718983904,2.01455126294268,2.10251376535973,3.48632973292256,3.94208422024667,1.17032263160997,10.7867319982068,8.37607669451032,4.10881751834894,3.67165690159789,2.6648780945253,1.41732687172878,1.39912375625629,1.73504190947031,1.91960207048034,1.69755860719212,4.76242424845991,4.17021995043718,1.30599894569468,0.799962113967033,0.91763712426868,0,0.86152399231815,1.07735616342945,0.950117097281869,1.76421090831952,0.443461021310609,1.27006134691926,1.84519436275371,0,8.95440021228951,6.64938581433969,11.8418226632174,0,0,0.523523743973798,0.588231488031014,0,0.971020706062307,2.39203954153597,2.23029248682932,2.38610777810186,0.782391344348039,1.09012578190223,2.19686182734472,1.36100929351998,1.1198913730029,0,3.35565212115473,3.62681071005672,3.02484419228218,1.54355661621568,1.71920063963254,3.09403255366465,4.65327859977075,4.23192783417626,1.90149421051854,1.35537812827653,0.889294796111139,2.6996991518442,1.97773272513395,3.5524005747305,3.59520132622086,4.2264013585371,7.77672092313582,7.2903206699113,7.15104868594699,6.28432165688368,8.1721360152097,6.00204916153275,7.66763768145891,1.83843757322004,5.50579404996943,8.93811366596314,9.06278546211836,4.08847491963601,4.02545631850602,6.77187381723788,5.58365998002762,6.19038871034848,5.19514042441154,5.00868595305235,5.83723891276322,4.65998614563251,6.81535739998656,4.1564358058732,2.6087803983151,3.44169550792555,6.79971333707751,5.93673510801599,1.94932925234301,4.03224198387602,3.23022166303029,1.53387290320252,3.11743205523443,0.35333957451034,8.45060518660083,5.13305909657271,2.54805239706646,0,0.432982082022428,1.26679932737549,0,4.45317130904334,2.84831672011889,3.11728492036132,3.46970653532272,1.52232739156071,3.22861696158482,1.50722640552623,3.52766121407114,6.28332956648377,0.494389935468748,8.96516012903452,2.65383165584962,3.23533699894818,4.19598885074748,2.42437626567611,0,7.61230072230023,9.00620839297857,2.29911349687732,3.47463861067169,1.79970819298022,3.04968544975355,4.19413790333504,3.66000482254901,6.15706325353036,4.17178368461463,6.64860189058859,6.64921742590592,5.84068547043927,4.48093200941392,4.60305791257344,3.28539585963777,7.15502310014011,5.33493816147085,4.36813998423599,4.68161537493908,4.52114453507145,4.83059143974428,6.40568601424249,4.96619140166563,4.9153640440413,3.44908788692548,3.02569728268511,2.81521798662318,3.5071317188412,3.89266148915837,6.268538997399,4.32142486456681,4.77682240364384,4.21327912387941,2.83082697826187,2.27330799516474,3.31401236056803,2.34526059981096,2.70093092191522,3.78791576936336,2.95146347621106,4.01094493507183,5.34828072925938,4.56064782379353,3.26942958628075,5.59503489705834,4.76085645829376,5.99909190639332,7.01759939641595,8.34290438105992,6.71032093801859,6.72927835405207,6.17427674275707,1.32167513193519,2.64450566663544,4.69234151177515,4.18026009348789,3.35055399437443,2.8235693447268,2.2237804384487,2.47293313946327,2.37264530772256,1.31759163779209,3.2673577144035,1.98956472041151,4.28920991662064,3.59527763461689,2.80979464837102,3.38540164532424,4.93136542478012,3.99869794134051,5.63538678365402,4.2766778847516,5.04276466635827,3.08597607517402,2.71917109634306,2.06654207171443,2.66897837330337,2.96153193412321,2.96452627087149,2.8363667971736,2.35870794135844,2.47348323623339,2.63718157805054,1.4470629585145,1.78238096246994,2.30156909960649,2.10775794807546,2.19649130550465,7.18841032636773,2.97712758134803,3.74445207737473,3.28352541331245,3.40855085691633,6.75420929908714,4.0645701836653,2.27389694124582,2.44447464663039,2.8856664581782,4.22442446919304,3.35012514883632,2.14239276797412,1.95133647857799,3.31033802623001,1.99318220683897,3.98636921643718,6.39066927391378,5.00786447411097,5.49666422609744,1.50791283939272,0,5.90117127622843,5.51873492609465,4.65596710964597,6.44664276257117,3.11476396215683,8.07906967053994,2.2085575359138,2.73307121007647,5.17016154558717,5.4962823529087,7.5751549188014,5.09537755419898,3.64329631507405,6.42962887404886,5.13874111330481,6.42642632843614,3.97432238583152,5.52003371368491,6.51547837414304,2.8044920905331,29.2039304347918,3.15614827001476,2.41858845571801,3.77210159511796,5.02013217897314,6.7635732547664,2.58428293168221,5.45300594216258,6.06045543254026,13.5895805912401,12.6502330289999,12.3762651897824,1.70219802876894,3.6012218806262,2.19909762430683,2.14337035031592,1.95074257006501,2.14042581122485,2.79733335023606,3.34911444026059,1.64270195644597,1.27099242518292,3.52845436887939,5.27636009412736,3.22928853391811,4.16159182004275,4.65552141612232,4.76008609260678,4.08073171281791,8.90041449650446,3.07567585436135,3.714963623338,2.96311243791539,3.39063222608444,2.46049609897845,3.43167259809784,4.07948231985253,3.91864066506242,5.2515990045681,0.954670618015114,2.68885594543965,4.67634774391752,4.10420295122845,3.13632444021703,3.9305261474312,3.10187996685088,2.39695021603474,2.35580347785627,3.88844919875379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| ||
|short_description=p3@4933439F18Rik | |||
}} | }} |
Latest revision as of 19:58, 1 October 2015
Short description: | p3@4933439F18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_4933439F18Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENSMUST00000070681_5end |
EntrezGene: | 4933439F18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.24e-07 | 33 |
neuronal stem cell | 1.24e-07 | 33 |
neuroblast | 1.24e-07 | 33 |
electrically signaling cell | 1.24e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 7.22e-12 | 95 |
ectoderm | 7.22e-12 | 95 |
presumptive ectoderm | 7.22e-12 | 95 |
ecto-epithelium | 1.06e-09 | 73 |
nervous system | 2.58e-08 | 75 |
structure with developmental contribution from neural crest | 4.67e-08 | 92 |
gray matter | 6.52e-08 | 34 |
central nervous system | 7.40e-08 | 73 |
neurectoderm | 9.17e-08 | 64 |
neural plate | 9.17e-08 | 64 |
presumptive neural plate | 9.17e-08 | 64 |
regional part of nervous system | 5.89e-07 | 54 |