FFCP PHASE1:Mm9::chr10:85806683..85806702,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=323 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:85806683..85806702,+ | |||
|description=CAGE_peak_at_chr10:85806683..85806702,+ | |||
|id=chr10:85806683..85806702,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.08e-10,7;CL:0002605,5.51e-10,2;CL:0002604,5.51e-10,2;CL:0000680,1.95e-07,6;CL:0000187,1.95e-07,6;CL:0000056,1.95e-07,6;CL:0000192,3.73e-07,3;CL:0000359,3.73e-07,3;CL:0002539,3.73e-07,3;CL:0000514,3.73e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,6.80e-09,5;UBERON:0007500,6.80e-09,5;UBERON:0001981,6.80e-09,5;UBERON:0002049,6.80e-09,5;UBERON:0007798,6.80e-09,5;UBERON:0004537,6.80e-09,5;UBERON:0006965,6.80e-09,5;UBERON:0002048,1.76e-07,14;UBERON:0000117,1.76e-07,14;UBERON:0000171,1.76e-07,14;UBERON:0000170,1.76e-07,14;UBERON:0005597,1.76e-07,14;UBERON:0000118,1.76e-07,14;UBERON:0001135,3.73e-07,3;UBERON:0004237,3.73e-07,3;UBERON:0004695,3.73e-07,3;UBERON:0002111,3.73e-07,3;UBERON:0004178,3.73e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65818226509636,4.1564541800001,0.734187008646726,0,0.872100625521786,1.5378032791413,4.08302788055995,0.55994568650145,0,0,0,0,0.257259436035947,0.573066879877513,1.54701627683233,0,0,0,0.338844532069132,0,1.3498495759221,0,1.4209602298922,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,1.10115880999389,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.763991238884051,0.294628585473668,0.284743361598206,0,1.21161909333094,0.302286240427142,2.02905142091174,0,0,0,0,0,0.421333260395256,0.511290967734173,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.68510327831436,0.258937883647172,1.33597925158342,0,0.304465478312141,0.230615497256059,0.452167921657868,0.587943535678524,1.13099932196708,1.48316980640624,0.144599356919912,0.884610551949874,0.161766849947409,0,0,0,0,0.41889341362691,0,0,0,0,0.149790639404823,0.457500602818626,0,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0.305518091550949,0,0,0.631325567659422,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0.393528463494808,0.308534225774757,0.697601834251224,0,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0,0,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0.387904974335251,0.140271639780637,0.316182685621286,0.885660887877613,1.09899109488962,0.740382983530803,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0.486405680325106,0,0,0,0,0.252578877947112,0,0,2.40179147216586,0,0,0,0.234690248288502,0.335012514883631,1.19021820443007,1.17080188714679,0.157635144106191,0.664394068946325,0.637819074629948,1.63863314715738,0.863424909329478,1.15719246865209,0,0,0,0.551873492609465,0.160550589987792,0,1.14754461763673,0.252470927204373,0.315508219416257,0,0,0.477937595905104,0.445597348164788,0,0,1.16902343164525,0,0.321321316421807,0.851640511249612,0,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0,0.49465875882444,0.645857706783622,0.180938774784468,0,0.164140899745061,0.291480836629851,0.370850604021019,0,0,0.185194527369712,0,0.546776910884101,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0,0,0.209718688851422,0,0,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0.579568782096571,0.750729901804728,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0.50695859978048,0,0.561849044819294,0.128050304809739,0,0.952587382566147,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0.726732083161643,0.188218760830661,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0.197008964751127,0,0,0,0,0.233931608445408,0,0.57386499620653,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65818226509636,4.1564541800001,0.734187008646726,0,0.872100625521786,1.5378032791413,4.08302788055995,0.55994568650145,0,0,0,0,0.257259436035947,0.573066879877513,1.54701627683233,0,0,0,0.338844532069132,0,1.3498495759221,0,1.4209602298922,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,1.10115880999389,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.763991238884051,0.294628585473668,0.284743361598206,0,1.21161909333094,0.302286240427142,2.02905142091174,0,0,0,0,0,0.421333260395256,0.511290967734173,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.68510327831436,0.258937883647172,1.33597925158342,0,0.304465478312141,0.230615497256059,0.452167921657868,0.587943535678524,1.13099932196708,1.48316980640624,0.144599356919912,0.884610551949874,0.161766849947409,0,0,0,0,0.41889341362691,0,0,0,0,0.149790639404823,0.457500602818626,0,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0.305518091550949,0,0,0.631325567659422,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0.393528463494808,0.308534225774757,0.697601834251224,0,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0,0,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0.387904974335251,0.140271639780637,0.316182685621286,0.885660887877613,1.09899109488962,0.740382983530803,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0.486405680325106,0,0,0,0,0.252578877947112,0,0,2.40179147216586,0,0,0,0.234690248288502,0.335012514883631,1.19021820443007,1.17080188714679,0.157635144106191,0.664394068946325,0.637819074629948,1.63863314715738,0.863424909329478,1.15719246865209,0,0,0,0.551873492609465,0.160550589987792,0,1.14754461763673,0.252470927204373,0.315508219416257,0,0,0.477937595905104,0.445597348164788,0,0,1.16902343164525,0,0.321321316421807,0.851640511249612,0,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0,0.49465875882444,0.645857706783622,0.180938774784468,0,0.164140899745061,0.291480836629851,0.370850604021019,0,0,0.185194527369712,0,0.546776910884101,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0,0,0.209718688851422,0,0,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0.579568782096571,0.750729901804728,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0.50695859978048,0,0.561849044819294,0.128050304809739,0,0.952587382566147,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0.726732083161643,0.188218760830661,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0.197008964751127,0,0,0,0,0.233931608445408,0,0.57386499620653,0,0.231867835620421 | ||
|short_description=p@chr10:85806683..85806702,+ | |||
}} | }} |
Latest revision as of 23:04, 4 August 2015
Short description: | p@chr10:85806683..85806702, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:85806683..85806702, + |
Coexpression cluster: | MCL_coexpression_mm9:323 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.08e-10 | 7 |
astrocyte of the cerebral cortex | 5.51e-10 | 2 |
astrocyte of the hippocampus | 5.51e-10 | 2 |
muscle precursor cell | 1.95e-07 | 6 |
muscle cell | 1.95e-07 | 6 |
myoblast | 1.95e-07 | 6 |
smooth muscle cell | 3.73e-07 | 3 |
vascular associated smooth muscle cell | 3.73e-07 | 3 |
aortic smooth muscle cell | 3.73e-07 | 3 |
smooth muscle myoblast | 3.73e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vessel | 6.80e-09 | 5 |
epithelial tube open at both ends | 6.80e-09 | 5 |
blood vessel | 6.80e-09 | 5 |
vasculature | 6.80e-09 | 5 |
vascular system | 6.80e-09 | 5 |
blood vasculature | 6.80e-09 | 5 |
vascular cord | 6.80e-09 | 5 |
lung | 1.76e-07 | 14 |
respiratory tube | 1.76e-07 | 14 |
respiration organ | 1.76e-07 | 14 |
pair of lungs | 1.76e-07 | 14 |
lung primordium | 1.76e-07 | 14 |
lung bud | 1.76e-07 | 14 |
smooth muscle tissue | 3.73e-07 | 3 |
blood vessel smooth muscle | 3.73e-07 | 3 |
arterial system smooth muscle | 3.73e-07 | 3 |
artery smooth muscle tissue | 3.73e-07 | 3 |
aorta smooth muscle tissue | 3.73e-07 | 3 |