FFCP PHASE1:Mm9::chr10:49508549..49508575,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:49508549..49508575,- to FFCP PHASE1:Mm9::chr10:49508549..49508575,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14806 | |EntrezGene=14806 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=281 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PAQ0,P39087,A3KMF1 | |UniProt=Q6PAQ0,P39087,A3KMF1 | ||
|association_with_transcript=0bp_to_ENSMUST00000105483,ENSMUST00000105487,NM_001111268,NM_010349,uc007fag.2,uc007fah.2,uc007fai.1_5end | |||
|cluster_id=chr10:49508549..49508575,- | |||
|description=CAGE_peak_1_at_Grik2_5end | |||
|id=chr10:49508549..49508575,- | |||
|ontology_enrichment_celltype=CL:0000540!8.59e-19!33;CL:0000047!8.59e-19!33;CL:0000031!8.59e-19!33;CL:0000404!8.59e-19!33;CL:0000221!5.51e-16!44;CL:0000133!5.51e-16!44;CL:0002319!8.68e-16!43;CL:0000393!4.75e-14!39;CL:0000211!4.75e-14!39;CL:0000117!1.55e-12!23;CL:0000337!1.55e-12!23;CL:0000055!1.47e-11!50;CL:0000107!1.37e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.09e-21,33;CL:0000047,7.09e-21,33;CL:0000031,7.09e-21,33;CL:0000404,7.09e-21,33;CL:0000221,5.03e-16,44;CL:0000133,5.03e-16,44;CL:0002319,8.47e-16,43;CL:0000393,6.43e-15,39;CL:0000211,6.43e-15,39;CL:0000117,7.32e-14,23;CL:0000337,7.32e-14,23;CL:0000107,2.54e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.83e-32!75;UBERON:0001016!7.83e-32!75;UBERON:0001017!1.08e-31!73;UBERON:0005743!1.08e-31!73;UBERON:0004121!5.40e-30!102;UBERON:0000924!5.40e-30!102;UBERON:0006601!5.40e-30!102;UBERON:0002346!8.25e-26!71;UBERON:0003075!8.25e-26!71;UBERON:0007284!8.25e-26!71;UBERON:0000033!6.40e-22!63;UBERON:0001049!7.87e-22!52;UBERON:0005068!7.87e-22!52;UBERON:0006241!7.87e-22!52;UBERON:0007135!7.87e-22!52;UBERON:0000955!8.68e-21!50;UBERON:0006238!8.68e-21!50;UBERON:0002616!4.23e-20!49;UBERON:0003056!1.04e-18!49;UBERON:0002020!2.62e-17!34;UBERON:0003080!9.61e-17!40;UBERON:0002780!3.22e-16!39;UBERON:0001890!3.22e-16!39;UBERON:0006240!3.22e-16!39;UBERON:0002791!1.71e-14!29;UBERON:0003528!1.71e-14!29;UBERON:0001893!1.71e-14!29;UBERON:0000956!3.17e-10!21;UBERON:0001869!3.17e-10!21;UBERON:0000203!3.17e-10!21;UBERON:0007811!4.84e-09!86;UBERON:0000153!8.26e-09!94;UBERON:0000468!8.57e-09!333;UBERON:0002619!1.43e-08!17;UBERON:0002410!1.37e-07!9;UBERON:0000010!2.68e-07!11;UBERON:0002021!7.28e-07!10;UBERON:0000411!7.28e-07!10;UBERON:0001950!7.28e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.67e-33,75;UBERON:0001017,2.48e-33,73;UBERON:0004121,1.63e-30,95;UBERON:0000924,1.63e-30,95;UBERON:0006601,1.63e-30,95;UBERON:0002346,1.59e-27,64;UBERON:0003075,1.59e-27,64;UBERON:0007284,1.59e-27,64;UBERON:0000073,5.53e-24,54;UBERON:0010371,5.83e-24,73;UBERON:0001049,1.35e-22,52;UBERON:0005068,1.35e-22,52;UBERON:0006241,1.35e-22,52;UBERON:0007135,1.35e-22,52;UBERON:0003056,3.15e-20,49;UBERON:0000955,1.41e-19,47;UBERON:0006238,1.41e-19,47;UBERON:0002616,7.73e-19,46;UBERON:0002020,1.38e-18,34;UBERON:0003080,5.23e-18,40;UBERON:0002780,2.01e-17,39;UBERON:0001890,2.01e-17,39;UBERON:0006240,2.01e-17,39;UBERON:0010314,4.44e-16,92;UBERON:0003528,1.90e-15,29;UBERON:0002791,1.90e-15,29;UBERON:0001893,1.90e-15,29;UBERON:0000956,1.08e-10,21;UBERON:0001869,1.08e-10,21;UBERON:0000203,1.08e-10,21;UBERON:0002619,7.63e-09,17;UBERON:0002410,2.54e-08,9;UBERON:0000010,5.41e-08,11;UBERON:0002021,1.65e-07,10;UBERON:0000411,1.65e-07,10;UBERON:0001950,1.65e-07,10 | |||
|phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2637879006672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0.782391344348039,0.872100625521786,0.878744730937887,1.94429899074283,0.55994568650145,0,0,0,0,0,0,0.515672092277442,49.5675329106015,61.8919445748278,64.0169717541241,1.0165335962074,0,0.449949858640699,0,0,4.19440154725767,3.07374644257244,34.5286408987231,26.8661817280064,28.3938697824366,44.5615535669934,41.9650227808066,48.8738288867667,34.1209876824921,53.3146896233812,70.4741638396088,52.351808614927,53.3014670399165,55.128468271221,34.9482798561205,63.5514312079247,40.2023518561989,65.8432253737066,74.2599484195297,94.870404522521,69.3350085491631,71.5773871969154,2.57469057332826,5.89458168832927,0,0,2.03991400112325,0.539703191637817,0,0,2.66844398250329,0,0,0,9.85903938436764,0,0,0,0,0,0,0.5709193985953,0,3.56261133755579,2.94925055502431,2.74018930480927,2.30615497256059,2.41156224884196,3.29248379979973,0.502666365318702,0,1.3013942122792,0,2.10296904931632,1.76673214768315,1.93950101254089,1.86391761218122,225.441213698891,212.378960708843,0,0,0,0,55.2727459403796,112.545148293382,59.1831998451591,58.7526202249894,55.7459696980121,50.076918738854,80.4716664816078,1.32391173005411,1.36847667671102,2.0217820674694,7.57590681191306,3.25301107406759,4.36813998423599,7.74267158163002,13.2620239695429,15.1721393107461,19.601399203582,20.052169055782,11.9003550539947,0.215567992932842,3.40390944302075,3.87092473160687,1.97276159184817,2.50242524303038,1.74126083261083,2.46938563689532,0.995171334092466,0,0,0,1.24275463521301,0.703578179943289,0.36012412292203,1.42046841351126,0.393528463494808,0.462801338662135,0.697601834251224,0.804820204198858,0.233530684734339,0.493679549740441,0.32833492815819,0.162137619091711,0.292399974850665,0,0.134206418760372,79.0690206601118,61.2282443656742,0,0,5.54549451391608,7.43157349953403,6.31450560478257,3.22693639397348,2.89091456998331,3.04361001780095,0.474529061544512,2.30578536613615,2.26201687920243,1.39269530428806,1.16978452271472,0.898819408654221,0.432276099749388,0.398282546508734,4.74169752382704,7.99739588268102,4.50830942692322,6.92414514674068,3.68509725618489,3.15611189506434,0.442655759869801,0,0.156998727841375,0,0.296452627087149,0.166845105716094,0.786235980452812,0,0,0.482354319504834,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,1.13694847062291,0.814824882210129,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,1.10344600874334,0.221464689648775,0.318909537314974,0.491589944147214,0.345369963731791,0.578596234326046,0,0,0,0.275936746304732,35.1605792073264,40.9068786206789,9.50822683184717,0.504941854408746,106.957286382111,123.378643197738,167.168556640652,112.554303835652,133.010808427189,147.765949071771,115.371049977345,118.363622454081,168.787881183166,101.216214672869,0.283880170416537,1.78065603667255,1.95464351224291,1.48473110675282,0,0.728341908464944,0.302323556964751,0.754420319023592,0,0.922305443831782,1.03371317267288,1.09060118843252,0.712994756769443,1.26414703174326,0,0,52.0872596803296,6.66226047915848,2.06973894052407,4.92975180572662,9.3990323830405,5.70780216326626,5.92376474167636,1.522324745573,0.469343416127421,0,0.441056796109924,0.65954501176592,1.29171541356724,1.02531972377865,0.716234064018819,1.14898629821543,0.582961673259701,37.6413363081335,0,0.82554747185289,0.370389054739423,0,0,0,0,0,0,0,6.16855187483214,11.3858901591035,9.50446999231851,6.48173717644853,5.67742665740062,4.04593039154462,3.63675205191478,0.785267825952089,0.90730481304255,0,0,1.04661582230785,0.827292452285488,3.11121901350476,2.45403664607689,3.8859908862879,2.46450201156083,0.651021924219751,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0.358053391334963,0,0,0,0.201932899896295,0,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0.906921534460845,0,0,0,2.12508553435409,0.375364950902364,1.28206136987086,0.214368379079066,0,74.5472432254528,73.1917126046411,61.2998199380154,46.228506050452,66.4530044177523,64.9638751755142,62.7770925215579,67.5481804836331,63.4399372577886,59.0246755397075,1.03787347584177,20.3502685434526,16.7318933639051,14.8295097411659,5.24032906569956,3.67687016900028,14.6682840349066,14.2164189494837,17.9714757371417,15.6672271293554,19.5179060915485,16.7877443833608,16.4809053146993,14.8538353579297,13.6122061424803,20.0043350338891,12.6313915279892,12.9249177710682,12.7746629249025,17.6638704161277,15.0862471049583,15.0854435235437,14.7830437767339,16.2787986628208,17.0337978551748,15.6537024599602,16.6464455314223,16.0472523977084,14.3952360676613,18.5176949647054,13.7616621024042,14.0861409797056,16.3692417267876,14.2541893891089,10.4169569929816,20.7342779688495,11.2287172053796,12.8922632428979,5.54736162999646,3.75005412503176,5.33296021926969 | |phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2637879006672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0.782391344348039,0.872100625521786,0.878744730937887,1.94429899074283,0.55994568650145,0,0,0,0,0,0,0.515672092277442,49.5675329106015,61.8919445748278,64.0169717541241,1.0165335962074,0,0.449949858640699,0,0,4.19440154725767,3.07374644257244,34.5286408987231,26.8661817280064,28.3938697824366,44.5615535669934,41.9650227808066,48.8738288867667,34.1209876824921,53.3146896233812,70.4741638396088,52.351808614927,53.3014670399165,55.128468271221,34.9482798561205,63.5514312079247,40.2023518561989,65.8432253737066,74.2599484195297,94.870404522521,69.3350085491631,71.5773871969154,2.57469057332826,5.89458168832927,0,0,2.03991400112325,0.539703191637817,0,0,2.66844398250329,0,0,0,9.85903938436764,0,0,0,0,0,0,0.5709193985953,0,3.56261133755579,2.94925055502431,2.74018930480927,2.30615497256059,2.41156224884196,3.29248379979973,0.502666365318702,0,1.3013942122792,0,2.10296904931632,1.76673214768315,1.93950101254089,1.86391761218122,225.441213698891,212.378960708843,0,0,0,0,55.2727459403796,112.545148293382,59.1831998451591,58.7526202249894,55.7459696980121,50.076918738854,80.4716664816078,1.32391173005411,1.36847667671102,2.0217820674694,7.57590681191306,3.25301107406759,4.36813998423599,7.74267158163002,13.2620239695429,15.1721393107461,19.601399203582,20.052169055782,11.9003550539947,0.215567992932842,3.40390944302075,3.87092473160687,1.97276159184817,2.50242524303038,1.74126083261083,2.46938563689532,0.995171334092466,0,0,0,1.24275463521301,0.703578179943289,0.36012412292203,1.42046841351126,0.393528463494808,0.462801338662135,0.697601834251224,0.804820204198858,0.233530684734339,0.493679549740441,0.32833492815819,0.162137619091711,0.292399974850665,0,0.134206418760372,79.0690206601118,61.2282443656742,0,0,5.54549451391608,7.43157349953403,6.31450560478257,3.22693639397348,2.89091456998331,3.04361001780095,0.474529061544512,2.30578536613615,2.26201687920243,1.39269530428806,1.16978452271472,0.898819408654221,0.432276099749388,0.398282546508734,4.74169752382704,7.99739588268102,4.50830942692322,6.92414514674068,3.68509725618489,3.15611189506434,0.442655759869801,0,0.156998727841375,0,0.296452627087149,0.166845105716094,0.786235980452812,0,0,0.482354319504834,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,1.13694847062291,0.814824882210129,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,1.10344600874334,0.221464689648775,0.318909537314974,0.491589944147214,0.345369963731791,0.578596234326046,0,0,0,0.275936746304732,35.1605792073264,40.9068786206789,9.50822683184717,0.504941854408746,106.957286382111,123.378643197738,167.168556640652,112.554303835652,133.010808427189,147.765949071771,115.371049977345,118.363622454081,168.787881183166,101.216214672869,0.283880170416537,1.78065603667255,1.95464351224291,1.48473110675282,0,0.728341908464944,0.302323556964751,0.754420319023592,0,0.922305443831782,1.03371317267288,1.09060118843252,0.712994756769443,1.26414703174326,0,0,52.0872596803296,6.66226047915848,2.06973894052407,4.92975180572662,9.3990323830405,5.70780216326626,5.92376474167636,1.522324745573,0.469343416127421,0,0.441056796109924,0.65954501176592,1.29171541356724,1.02531972377865,0.716234064018819,1.14898629821543,0.582961673259701,37.6413363081335,0,0.82554747185289,0.370389054739423,0,0,0,0,0,0,0,6.16855187483214,11.3858901591035,9.50446999231851,6.48173717644853,5.67742665740062,4.04593039154462,3.63675205191478,0.785267825952089,0.90730481304255,0,0,1.04661582230785,0.827292452285488,3.11121901350476,2.45403664607689,3.8859908862879,2.46450201156083,0.651021924219751,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0.358053391334963,0,0,0,0.201932899896295,0,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0.906921534460845,0,0,0,2.12508553435409,0.375364950902364,1.28206136987086,0.214368379079066,0,74.5472432254528,73.1917126046411,61.2998199380154,46.228506050452,66.4530044177523,64.9638751755142,62.7770925215579,67.5481804836331,63.4399372577886,59.0246755397075,1.03787347584177,20.3502685434526,16.7318933639051,14.8295097411659,5.24032906569956,3.67687016900028,14.6682840349066,14.2164189494837,17.9714757371417,15.6672271293554,19.5179060915485,16.7877443833608,16.4809053146993,14.8538353579297,13.6122061424803,20.0043350338891,12.6313915279892,12.9249177710682,12.7746629249025,17.6638704161277,15.0862471049583,15.0854435235437,14.7830437767339,16.2787986628208,17.0337978551748,15.6537024599602,16.6464455314223,16.0472523977084,14.3952360676613,18.5176949647054,13.7616621024042,14.0861409797056,16.3692417267876,14.2541893891089,10.4169569929816,20.7342779688495,11.2287172053796,12.8922632428979,5.54736162999646,3.75005412503176,5.33296021926969 | ||
|short_description=p1@Grik2 | |||
}} | }} |
Latest revision as of 01:30, 26 September 2015
Short description: | p1@Grik2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Grik2_5end |
Coexpression cluster: | MCL_coexpression_mm9:281 |
Association with transcript: | 0bp_to_ENSMUST00000105483, ENSMUST00000105487, NM_001111268, NM_010349, uc007fag.2, uc007fah.2, uc007fai.1_5end |
EntrezGene: | Grik2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.09e-21 | 33 |
neuronal stem cell | 7.09e-21 | 33 |
neuroblast | 7.09e-21 | 33 |
electrically signaling cell | 7.09e-21 | 33 |
ectodermal cell | 5.03e-16 | 44 |
neurectodermal cell | 5.03e-16 | 44 |
neural cell | 8.47e-16 | 43 |
electrically responsive cell | 6.43e-15 | 39 |
electrically active cell | 6.43e-15 | 39 |
CNS neuron (sensu Vertebrata) | 7.32e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.32e-14 | 23 |
autonomic neuron | 2.54e-08 | 9 |