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FFCP PHASE1:Mm9::chr10:32609480..32609533,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr10:32609480..32609533,-
|DHSsupport=NA
|short_description=p2@Nkain2
|DPIdataset=NA
|description=CAGE_peak_2_at_Nkain2_5end
|association_with_transcript=187bp_to_NM_001013411,NM_001025286,uc007etw.2,uc007ety.2_5end
|EntrezGene=432450
|EntrezGene=432450
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q4PNJ2
|UniProt=Q4PNJ2
|association_with_transcript=187bp_to_NM_001013411,NM_001025286,uc007etw.2,uc007ety.2_5end
|cluster_id=chr10:32609480..32609533,-
|description=CAGE_peak_2_at_Nkain2_5end
|id=chr10:32609480..32609533,-
|ontology_enrichment_celltype=CL:0000540!2.40e-16!33;CL:0000047!2.40e-16!33;CL:0000031!2.40e-16!33;CL:0000404!2.40e-16!33;CL:0000393!6.38e-15!39;CL:0000211!6.38e-15!39;CL:0000221!2.57e-14!44;CL:0000133!2.57e-14!44;CL:0002319!1.26e-13!43;CL:0000055!3.18e-12!50;CL:0000117!1.97e-10!23;CL:0000337!1.97e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000540,2.14e-23,33;CL:0000047,2.14e-23,33;CL:0000031,2.14e-23,33;CL:0000404,2.14e-23,33;CL:0000221,1.26e-21,44;CL:0000133,1.26e-21,44;CL:0002319,1.48e-20,43;CL:0000393,2.89e-19,39;CL:0000211,2.89e-19,39;CL:0000117,2.07e-14,23;CL:0000337,2.07e-14,23;CL:0002321,5.48e-10,70;CL:0000107,2.40e-09,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.50e-31!75;UBERON:0001016!3.50e-31!75;UBERON:0001017!4.64e-30!73;UBERON:0005743!4.64e-30!73;UBERON:0004121!1.73e-27!102;UBERON:0000924!1.73e-27!102;UBERON:0006601!1.73e-27!102;UBERON:0001049!2.35e-21!52;UBERON:0005068!2.35e-21!52;UBERON:0006241!2.35e-21!52;UBERON:0007135!2.35e-21!52;UBERON:0002346!5.79e-21!71;UBERON:0003075!5.79e-21!71;UBERON:0007284!5.79e-21!71;UBERON:0000955!1.43e-20!50;UBERON:0006238!1.43e-20!50;UBERON:0000033!5.16e-20!63;UBERON:0002616!8.71e-20!49;UBERON:0002020!6.53e-16!34;UBERON:0003080!1.21e-15!40;UBERON:0002780!5.49e-15!39;UBERON:0001890!5.49e-15!39;UBERON:0006240!5.49e-15!39;UBERON:0003056!3.87e-14!49;UBERON:0002791!3.00e-13!29;UBERON:0003528!3.00e-13!29;UBERON:0001893!3.00e-13!29;UBERON:0000956!3.91e-09!21;UBERON:0001869!3.91e-09!21;UBERON:0000203!3.91e-09!21;UBERON:0007811!9.03e-09!86;UBERON:0000153!2.92e-08!94;UBERON:0002021!7.20e-08!10;UBERON:0000411!7.20e-08!10;UBERON:0001950!7.20e-08!10;UBERON:0000010!1.81e-07!11;UBERON:0002619!3.07e-07!17;UBERON:0000468!3.71e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.00e-42,75;UBERON:0001017,1.90e-40,73;UBERON:0004121,5.17e-34,95;UBERON:0000924,5.17e-34,95;UBERON:0006601,5.17e-34,95;UBERON:0000073,6.07e-28,54;UBERON:0001049,4.60e-26,52;UBERON:0005068,4.60e-26,52;UBERON:0006241,4.60e-26,52;UBERON:0007135,4.60e-26,52;UBERON:0002346,1.31e-24,64;UBERON:0003075,1.31e-24,64;UBERON:0007284,1.31e-24,64;UBERON:0010371,1.97e-22,73;UBERON:0002020,2.88e-22,34;UBERON:0000955,5.98e-22,47;UBERON:0006238,5.98e-22,47;UBERON:0002616,7.25e-21,46;UBERON:0003528,3.14e-18,29;UBERON:0002791,3.14e-18,29;UBERON:0001893,3.14e-18,29;UBERON:0003080,2.45e-17,40;UBERON:0002780,2.04e-16,39;UBERON:0001890,2.04e-16,39;UBERON:0006240,2.04e-16,39;UBERON:0010314,1.48e-14,92;UBERON:0003056,5.29e-14,49;UBERON:0000956,5.07e-12,21;UBERON:0001869,5.07e-12,21;UBERON:0000203,5.07e-12,21;UBERON:0002021,3.32e-11,10;UBERON:0000411,3.32e-11,10;UBERON:0001950,3.32e-11,10;UBERON:0000010,1.35e-10,11;UBERON:0003076,1.66e-09,12;UBERON:0003057,1.66e-09,12;UBERON:0002410,2.40e-09,9;UBERON:0002619,3.49e-09,17;UBERON:0002420,1.45e-07,8;UBERON:0007245,1.45e-07,8;UBERON:0010009,1.45e-07,8;UBERON:0010011,1.45e-07,8;UBERON:0000454,1.45e-07,8;UBERON:0011216,4.34e-07,194
|phase1_expression=5.60520964866779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.709638518536602,0.550640256485045,0,1.52617609466313,0.439372365468944,0,0,0,0,0,0,0.514518872071894,0,0,1.61853168687678,3.70293685490423,1.26766280701236,0,0,0,0,0,0,1.53687322128622,3.94020526772215,2.16009501330705,1.68259969081106,5.14171771926846,4.19650227808066,0.857435594504678,2.39613677545591,0,8.8092704799511,7.15049093277051,10.752457327937,1.18697658957174,3.11057988248193,2.6045668527838,4.18774498502071,7.87867654044352,9.32069311438542,3.24091444021034,6.54909731675874,3.54158947068071,1.96888102666279,3.40072020480535,0.289864488701678,0,0,0,0,0,0,0,0,0,12.2533775205712,0,0,0,0,0,0,0,0,0.148442139064825,0,0.913396434936424,0.461230994512117,0.452167921657868,0.940709657085638,0.125666591329675,0,0,0,0.485300549842228,0,0,0,4.39171195517321,4.60782754989601,0,0,0,0,9.13722900369418,14.1825186873774,4.39790232395025,10.6032835317289,8.95004100656157,10.5971902725376,12.4925772562173,0.509196819251581,0,0.505445516867349,0.420883711772948,0,0,0,1.20563854268572,0.95251098811859,0.2562274405697,0.655912071918102,1.03481348295606,0,0.189106080167819,0.351902248327898,0,1.39023624612799,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0.268273401399619,0,0,0,0.243206428637567,0.146199987425332,0,0,12.1968170167194,1.64647379806855,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0.605050573870028,0.667134131534611,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.210407459670956,0,0,0,0,0.296452627087149,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,16.3761601787548,18.5194464815681,0,0.504941854408746,6.62567260774139,3.12350995437311,8.18608911384636,7.64700153448166,8.68914828921337,11.3230612315533,5.26253912177363,6.72188473196017,5.92931666919785,15.7447445046685,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0,0.188605079755898,0,0.922305443831782,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.540183282093931,0.129358683782755,0.643011105094777,1.24138163549592,0.356737635204141,1.31639216481697,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.807322133479528,0.120625849856312,0.119372344003136,0.328281799490123,0,18.17167959703,0,0.619160603889667,0,0,0,0,0,0,0,0,0.790839983952838,1.21991680276109,1.29606408986162,1.67270636811575,0.436725127492355,0.539457385539283,0.495920734352016,0,0,2.4853572523477,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0,0.2604087696879,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,8.471277639256,10.1271552031579,10.3121192419091,5.15559547031063,8.90607275701835,10.5755145634558,10.1253375034771,9.00642406448441,9.9691329976525,6.73088405277366,0.103787347584177,0.399024873401031,1.70733605754134,1.21553358534147,0.628839487883947,0,1.33348036680969,1.85431551515005,3.20919209591815,1.76888048234658,0.760437899670719,1.69763707247469,2.34103768674706,1.85672941974121,1.66562859971278,3.33405583898152,1.27472758539341,1.54327376370964,3.29668720642645,2.20798380201596,2.05721551431249,1.95223386775271,0.953744759789284,1.59881058295561,1.50575008664529,1.69229215783353,2.0122077016005,0.789209134313529,0.950628796921032,1.12228454331548,1.42362021749009,0.689531376628944,0.409231043169689,0.929621047115796,0.964533054905707,0.749431733813838,0.935726433781634,1.28922632428979,0.956441660344217,0.661774257358546,1.15933917810211
|phase1_expression=5.60520964866779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.709638518536602,0.550640256485045,0,1.52617609466313,0.439372365468944,0,0,0,0,0,0,0.514518872071894,0,0,1.61853168687678,3.70293685490423,1.26766280701236,0,0,0,0,0,0,1.53687322128622,3.94020526772215,2.16009501330705,1.68259969081106,5.14171771926846,4.19650227808066,0.857435594504678,2.39613677545591,0,8.8092704799511,7.15049093277051,10.752457327937,1.18697658957174,3.11057988248193,2.6045668527838,4.18774498502071,7.87867654044352,9.32069311438542,3.24091444021034,6.54909731675874,3.54158947068071,1.96888102666279,3.40072020480535,0.289864488701678,0,0,0,0,0,0,0,0,0,12.2533775205712,0,0,0,0,0,0,0,0,0.148442139064825,0,0.913396434936424,0.461230994512117,0.452167921657868,0.940709657085638,0.125666591329675,0,0,0,0.485300549842228,0,0,0,4.39171195517321,4.60782754989601,0,0,0,0,9.13722900369418,14.1825186873774,4.39790232395025,10.6032835317289,8.95004100656157,10.5971902725376,12.4925772562173,0.509196819251581,0,0.505445516867349,0.420883711772948,0,0,0,1.20563854268572,0.95251098811859,0.2562274405697,0.655912071918102,1.03481348295606,0,0.189106080167819,0.351902248327898,0,1.39023624612799,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0.268273401399619,0,0,0,0.243206428637567,0.146199987425332,0,0,12.1968170167194,1.64647379806855,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0.605050573870028,0.667134131534611,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.210407459670956,0,0,0,0,0.296452627087149,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,16.3761601787548,18.5194464815681,0,0.504941854408746,6.62567260774139,3.12350995437311,8.18608911384636,7.64700153448166,8.68914828921337,11.3230612315533,5.26253912177363,6.72188473196017,5.92931666919785,15.7447445046685,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0,0.188605079755898,0,0.922305443831782,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.540183282093931,0.129358683782755,0.643011105094777,1.24138163549592,0.356737635204141,1.31639216481697,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.807322133479528,0.120625849856312,0.119372344003136,0.328281799490123,0,18.17167959703,0,0.619160603889667,0,0,0,0,0,0,0,0,0.790839983952838,1.21991680276109,1.29606408986162,1.67270636811575,0.436725127492355,0.539457385539283,0.495920734352016,0,0,2.4853572523477,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0,0.2604087696879,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,8.471277639256,10.1271552031579,10.3121192419091,5.15559547031063,8.90607275701835,10.5755145634558,10.1253375034771,9.00642406448441,9.9691329976525,6.73088405277366,0.103787347584177,0.399024873401031,1.70733605754134,1.21553358534147,0.628839487883947,0,1.33348036680969,1.85431551515005,3.20919209591815,1.76888048234658,0.760437899670719,1.69763707247469,2.34103768674706,1.85672941974121,1.66562859971278,3.33405583898152,1.27472758539341,1.54327376370964,3.29668720642645,2.20798380201596,2.05721551431249,1.95223386775271,0.953744759789284,1.59881058295561,1.50575008664529,1.69229215783353,2.0122077016005,0.789209134313529,0.950628796921032,1.12228454331548,1.42362021749009,0.689531376628944,0.409231043169689,0.929621047115796,0.964533054905707,0.749431733813838,0.935726433781634,1.28922632428979,0.956441660344217,0.661774257358546,1.15933917810211
|short_description=p2@Nkain2
}}
}}

Latest revision as of 22:58, 25 September 2015

Short description:p2@Nkain2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nkain2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 187bp_to_NM_001013411, NM_001025286, uc007etw.2, uc007ety.2_5end
EntrezGene:Nkain2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nkain2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D91.97
Mouse Schwann, donor2.CNhs12573.11746-123F93.40
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.14
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D510.60
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B212.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E812.20
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C216.38
medulla oblongata, neonate N30.CNhs11200.1396-42A318.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.65
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.32
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I915.74
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C918.17
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system4.00e-4275
central nervous system1.90e-4073
ectoderm-derived structure5.17e-3495
ectoderm5.17e-3495
presumptive ectoderm5.17e-3495
regional part of nervous system6.07e-2854
neural tube4.60e-2652
neural rod4.60e-2652
future spinal cord4.60e-2652
neural keel4.60e-2652
neurectoderm1.31e-2464
neural plate1.31e-2464
presumptive neural plate1.31e-2464
ecto-epithelium1.97e-2273
gray matter2.88e-2234
brain5.98e-2247
future brain5.98e-2247
regional part of brain7.25e-2146
brain grey matter3.14e-1829
regional part of telencephalon3.14e-1829
telencephalon3.14e-1829
anterior neural tube2.45e-1740
regional part of forebrain2.04e-1639
forebrain2.04e-1639
future forebrain2.04e-1639
structure with developmental contribution from neural crest1.48e-1492
pre-chordal neural plate5.29e-1449
cerebral cortex5.07e-1221
cerebral hemisphere5.07e-1221
pallium5.07e-1221
occipital lobe3.32e-1110
visual cortex3.32e-1110
neocortex3.32e-1110
peripheral nervous system1.35e-1011
posterior neural tube1.66e-0912
chordal neural plate1.66e-0912
autonomic nervous system2.40e-099
regional part of cerebral cortex3.49e-0917
basal ganglion1.45e-078
nuclear complex of neuraxis1.45e-078
aggregate regional part of brain1.45e-078
collection of basal ganglia1.45e-078
cerebral subcortex1.45e-078
organ system subdivision4.34e-07194
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