FFCP PHASE1:Mm9::chr10:126703380..126703498,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:126703380..126703498,+ to FFCP PHASE1:Mm9::chr10:126703380..126703498,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=69654 | |EntrezGene=69654 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1875 | |||
|TSSclassifier=NA | |||
|UniProt=Q99KJ8 | |UniProt=Q99KJ8 | ||
|association_with_transcript=0bp_to_ENSMUST00000026479_5end | |||
|cluster_id=chr10:126703380..126703498,+ | |||
|description=CAGE_peak_1_at_Dctn2_5end | |||
|id=chr10:126703380..126703498,+ | |||
|ontology_enrichment_celltype=CL:0002321!6.25e-23!70;CL:0000220!6.25e-23!70;CL:0000055!1.20e-22!50;CL:0000221!1.99e-19!44;CL:0000133!1.99e-19!44;CL:0002319!2.59e-19!43;CL:0000393!3.69e-17!39;CL:0000211!3.69e-17!39;CL:0000540!4.84e-14!33;CL:0000047!4.84e-14!33;CL:0000031!4.84e-14!33;CL:0000404!4.84e-14!33;CL:0000117!2.13e-11!23;CL:0000337!2.13e-11!23;CL:0002371!8.72e-11!118;CL:0000548!3.66e-10!115;CL:0000004!3.66e-10!115;CL:0000255!3.66e-10!115;CL:0000144!1.25e-09!121;CL:0000012!1.25e-09!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.25e-23,70;CL:0000221,1.99e-19,44;CL:0000133,1.99e-19,44;CL:0002319,2.59e-19,43;CL:0000393,3.69e-17,39;CL:0000211,3.69e-17,39;CL:0000540,4.84e-14,33;CL:0000047,4.84e-14,33;CL:0000031,4.84e-14,33;CL:0000404,4.84e-14,33;CL:0000117,2.13e-11,23;CL:0000337,2.13e-11,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.82e-27!75;UBERON:0001016!9.82e-27!75;UBERON:0001017!2.85e-26!73;UBERON:0005743!2.85e-26!73;UBERON:0004121!2.65e-20!102;UBERON:0000924!2.65e-20!102;UBERON:0006601!2.65e-20!102;UBERON:0001049!2.67e-17!52;UBERON:0005068!2.67e-17!52;UBERON:0006241!2.67e-17!52;UBERON:0007135!2.67e-17!52;UBERON:0002616!5.52e-16!49;UBERON:0000955!1.47e-15!50;UBERON:0006238!1.47e-15!50;UBERON:0002346!4.48e-15!71;UBERON:0003075!4.48e-15!71;UBERON:0007284!4.48e-15!71;UBERON:0002020!2.38e-14!34;UBERON:0000033!4.87e-13!63;UBERON:0003080!3.60e-12!40;UBERON:0002780!4.95e-12!39;UBERON:0001890!4.95e-12!39;UBERON:0006240!4.95e-12!39;UBERON:0002791!8.06e-12!29;UBERON:0003528!8.06e-12!29;UBERON:0001893!8.06e-12!29;UBERON:0004111!8.96e-11!122;UBERON:0000025!1.93e-10!114;UBERON:0003056!6.45e-10!49;UBERON:0000956!1.87e-09!21;UBERON:0001869!1.87e-09!21;UBERON:0000203!1.87e-09!21;UBERON:0002619!2.02e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.82e-27,75;UBERON:0001017,2.85e-26,73;UBERON:0004121,7.60e-21,95;UBERON:0000924,7.60e-21,95;UBERON:0006601,7.60e-21,95;UBERON:0000073,1.26e-18,54;UBERON:0001049,2.67e-17,52;UBERON:0005068,2.67e-17,52;UBERON:0006241,2.67e-17,52;UBERON:0007135,2.67e-17,52;UBERON:0002346,7.29e-16,64;UBERON:0003075,7.29e-16,64;UBERON:0007284,7.29e-16,64;UBERON:0010314,3.94e-15,92;UBERON:0002616,2.18e-14,46;UBERON:0002020,2.38e-14,34;UBERON:0000955,5.59e-14,47;UBERON:0006238,5.59e-14,47;UBERON:0010371,1.91e-13,73;UBERON:0003080,3.60e-12,40;UBERON:0002780,4.95e-12,39;UBERON:0001890,4.95e-12,39;UBERON:0006240,4.95e-12,39;UBERON:0003528,8.06e-12,29;UBERON:0002791,8.06e-12,29;UBERON:0001893,8.06e-12,29;UBERON:0004111,8.96e-11,122;UBERON:0000025,1.93e-10,114;UBERON:0003056,6.45e-10,49;UBERON:0000956,1.87e-09,21;UBERON:0001869,1.87e-09,21;UBERON:0000203,1.87e-09,21;UBERON:0002619,2.02e-08,17 | |||
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| ||
|short_description=p1@Dctn2 | |||
}} | }} |
Latest revision as of 17:36, 25 September 2015
Short description: | p1@Dctn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dctn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1875 |
Association with transcript: | 0bp_to_ENSMUST00000026479_5end |
EntrezGene: | Dctn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.25e-23 | 70 |
ectodermal cell | 1.99e-19 | 44 |
neurectodermal cell | 1.99e-19 | 44 |
neural cell | 2.59e-19 | 43 |
electrically responsive cell | 3.69e-17 | 39 |
electrically active cell | 3.69e-17 | 39 |
neuron | 4.84e-14 | 33 |
neuronal stem cell | 4.84e-14 | 33 |
neuroblast | 4.84e-14 | 33 |
electrically signaling cell | 4.84e-14 | 33 |
CNS neuron (sensu Vertebrata) | 2.13e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.13e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.82e-27 | 75 |
central nervous system | 2.85e-26 | 73 |
ectoderm-derived structure | 7.60e-21 | 95 |
ectoderm | 7.60e-21 | 95 |
presumptive ectoderm | 7.60e-21 | 95 |
regional part of nervous system | 1.26e-18 | 54 |
neural tube | 2.67e-17 | 52 |
neural rod | 2.67e-17 | 52 |
future spinal cord | 2.67e-17 | 52 |
neural keel | 2.67e-17 | 52 |
neurectoderm | 7.29e-16 | 64 |
neural plate | 7.29e-16 | 64 |
presumptive neural plate | 7.29e-16 | 64 |
structure with developmental contribution from neural crest | 3.94e-15 | 92 |
regional part of brain | 2.18e-14 | 46 |
gray matter | 2.38e-14 | 34 |
brain | 5.59e-14 | 47 |
future brain | 5.59e-14 | 47 |
ecto-epithelium | 1.91e-13 | 73 |
anterior neural tube | 3.60e-12 | 40 |
regional part of forebrain | 4.95e-12 | 39 |
forebrain | 4.95e-12 | 39 |
future forebrain | 4.95e-12 | 39 |
brain grey matter | 8.06e-12 | 29 |
regional part of telencephalon | 8.06e-12 | 29 |
telencephalon | 8.06e-12 | 29 |
anatomical conduit | 8.96e-11 | 122 |
tube | 1.93e-10 | 114 |
pre-chordal neural plate | 6.45e-10 | 49 |
cerebral cortex | 1.87e-09 | 21 |
cerebral hemisphere | 1.87e-09 | 21 |
pallium | 1.87e-09 | 21 |
regional part of cerebral cortex | 2.02e-08 | 17 |