FFCP PHASE1:Hg19::chrX:73834345..73834364,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:73834345..73834364,- to FFCP PHASE1:Hg19::chrX:73834345..73834364,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51132 | |EntrezGene=51132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13429 | |HGNC=13429 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NVW2 | |UniProt=Q9NVW2 | ||
|association_with_transcript=87bp_to_ENST00000332687,ENST00000349225_5end | |||
|cluster_id=chrX:73834345..73834364,- | |||
|coexpression_cluster_id=C723 | |||
|description=CAGE_peak_4_at_RLIM_5end | |||
|id=chrX:73834345..73834364,- | |||
|ontology_enrichment_celltype=CL:0000037!4.85e-20!172;CL:0000566!4.85e-20!172;CL:0002057!6.96e-20!42;CL:0000763!1.95e-19!112;CL:0000049!1.95e-19!112;CL:0002032!7.68e-19!165;CL:0000837!7.68e-19!165;CL:0000860!9.64e-19!45;CL:0000766!1.60e-17!76;CL:0000988!1.94e-17!182;CL:0000738!3.11e-17!140;CL:0000557!1.10e-16!71;CL:0000839!3.49e-15!70;CL:0002031!1.01e-14!124;CL:0002009!1.65e-13!65;CL:0002194!1.34e-12!63;CL:0000576!1.34e-12!63;CL:0000040!1.34e-12!63;CL:0000559!1.34e-12!63;CL:0002087!1.68e-12!119;CL:0000134!6.46e-10!358;CL:0002320!3.40e-09!365;CL:0000219!2.62e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.48e-33;33!CL:0002057;7.48e-33;33!CL:0000473;4.80e-22;39!CL:0000234;4.80e-22;39!CL:0000576;2.71e-18;48!CL:0000766;2.69e-15;69!CL:0000763;1.64e-11;100!CL:0002087;3.27e-08;104!CL:0000097;1.30e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.77e-33,42;CL:0002057,9.77e-33,42;CL:0000763,1.19e-31,108;CL:0000049,1.19e-31,108;CL:0000037,5.69e-30,168;CL:0000766,1.79e-29,72;CL:0002032,2.05e-28,161;CL:0000837,2.05e-28,161;CL:0000988,7.31e-28,177;CL:0000557,1.80e-27,67;CL:0000473,6.65e-27,48;CL:0000234,6.65e-27,48;CL:0000738,4.34e-25,136;CL:0000839,1.32e-24,66;CL:0002031,8.18e-22,120;CL:0002009,1.43e-21,61;CL:0002194,6.89e-20,59;CL:0000576,6.89e-20,59;CL:0000040,6.89e-20,59;CL:0000559,6.89e-20,59;CL:0002087,8.36e-18,115;CL:0000134,2.47e-12,354;CL:0002320,1.57e-11,361;CL:0000219,6.44e-10,386;CL:0000048,7.04e-08,427;CL:0000723,1.04e-07,433;CL:0000034,1.64e-07,441;CL:0000097,1.75e-07,5;CL:0002028,1.75e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.37e-25;42!CL:0000049;6.24e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.33e-17!102;UBERON:0003061!8.33e-17!102;UBERON:0002371!1.74e-15!80;UBERON:0002193!3.89e-15!112;UBERON:0001474!5.58e-14!86;UBERON:0002780!2.78e-12!41;UBERON:0001890!2.78e-12!41;UBERON:0006240!2.78e-12!41;UBERON:0004765!3.36e-12!101;UBERON:0001434!3.36e-12!101;UBERON:0001049!8.83e-12!57;UBERON:0005068!8.83e-12!57;UBERON:0006241!8.83e-12!57;UBERON:0007135!8.83e-12!57;UBERON:0003080!1.79e-11!42;UBERON:0002020!5.81e-11!34;UBERON:0003528!5.81e-11!34;UBERON:0002405!7.61e-11!115;UBERON:0001893!1.76e-10!34;UBERON:0001869!2.45e-10!32;UBERON:0002791!3.90e-10!33;UBERON:0002384!1.28e-09!375;UBERON:0007023!1.76e-09!115;UBERON:0002616!7.34e-09!59;UBERON:0002619!1.78e-08!22;UBERON:0001950!1.73e-07!20;UBERON:0000955!2.24e-07!69;UBERON:0006238!2.24e-07!69;UBERON:0000956!2.45e-07!25;UBERON:0000203!2.45e-07!25;UBERON:0001017!3.01e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.06e-09;32!UBERON:0003528;4.90e-09;34!UBERON:0002020;4.90e-09;34!UBERON:0002791;1.11e-08;32!UBERON:0002780;1.56e-08;41!UBERON:0001890;1.56e-08;41!UBERON:0001893;3.25e-08;34!UBERON:0002420;1.18e-07;9!UBERON:0000125;1.18e-07;9!UBERON:0007245;1.18e-07;9!UBERON:0002308;1.18e-07;9!UBERON:0010009;1.18e-07;9!UBERON:0010011;1.18e-07;9!UBERON:0000454;1.18e-07;9!UBERON:0002619;7.51e-07;22 | |||
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| ||
|short_description=p4@RLIM | |||
}} | }} |
Latest revision as of 10:52, 16 September 2015
Short description: | p4@RLIM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RLIM_5end |
Coexpression cluster: | C723_CD14_CD4_Eosinophils_CD8_Natural_Neutrophils_CD19 |
Association with transcript: | 87bp_to_ENST00000332687, ENST00000349225_5end |
EntrezGene: | RLIM |
HGNC: | 13429 |
UniProt: | Q9NVW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.77e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.77e-33 | 42 |
myeloid cell | 1.19e-31 | 108 |
common myeloid progenitor | 1.19e-31 | 108 |
hematopoietic stem cell | 5.69e-30 | 168 |
myeloid leukocyte | 1.79e-29 | 72 |
hematopoietic oligopotent progenitor cell | 2.05e-28 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-28 | 161 |
hematopoietic cell | 7.31e-28 | 177 |
granulocyte monocyte progenitor cell | 1.80e-27 | 67 |
defensive cell | 6.65e-27 | 48 |
phagocyte | 6.65e-27 | 48 |
leukocyte | 4.34e-25 | 136 |
myeloid lineage restricted progenitor cell | 1.32e-24 | 66 |
hematopoietic lineage restricted progenitor cell | 8.18e-22 | 120 |
macrophage dendritic cell progenitor | 1.43e-21 | 61 |
monopoietic cell | 6.89e-20 | 59 |
monocyte | 6.89e-20 | 59 |
monoblast | 6.89e-20 | 59 |
promonocyte | 6.89e-20 | 59 |
nongranular leukocyte | 8.36e-18 | 115 |
mesenchymal cell | 2.47e-12 | 354 |
connective tissue cell | 1.57e-11 | 361 |
motile cell | 6.44e-10 | 386 |
multi fate stem cell | 7.04e-08 | 427 |
somatic stem cell | 1.04e-07 | 433 |
stem cell | 1.64e-07 | 441 |
mast cell | 1.75e-07 | 5 |
basophil mast progenitor cell | 1.75e-07 | 5 |