FFCP PHASE1:Hg19::chrX:70586082..70586093,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:70586082..70586093,+ to FFCP PHASE1:Hg19::chrX:70586082..70586093,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6872 | |EntrezGene=6872 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11535 | |HGNC=11535 | ||
|TSSclassifier=strong | |||
|UniProt=P21675,A8MWR5,B1Q2X3,F5GWC6 | |UniProt=P21675,A8MWR5,B1Q2X3,F5GWC6 | ||
|association_with_transcript=-20bp_to_ENST00000373790,ENST00000395779,ENST00000423759,ENST00000449580,ENST00000538124,NM_004606,NM_138923,uc004dzt.3,uc004dzu.3_5end | |||
|cluster_id=chrX:70586082..70586093,+ | |||
|description=CAGE_peak_2_at_TAF1_5end | |||
|id=chrX:70586082..70586093,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.74e-10!112;CL:0000049!3.74e-10!112;CL:0000037!1.65e-08!172;CL:0000566!1.65e-08!172;CL:0002032!3.42e-08!165;CL:0000837!3.42e-08!165;CL:0000988!3.66e-07!182 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.92e-11,108;CL:0000049,2.92e-11,108;CL:0000037,8.18e-09,168;CL:0002032,2.39e-08,161;CL:0000837,2.39e-08,161;CL:0000766,7.67e-08,72;CL:0000988,2.72e-07,177;CL:0000839,9.92e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.19e-15!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.63e-14,114;UBERON:0002390,4.26e-08,98;UBERON:0003061,4.26e-08,98;UBERON:0002193,2.39e-07,108 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0.522371256399677,0.491467873003018,0,0,0.263766978228454,0.37129905888014,0,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0.246242116153576,0.204000691244253,0,0.85870796139317,0.136874425072884,0.502170558379211,1.60468152070698,1.72411237844886,1.81034797021462,0,1.15148819429164,0.77408061658038,0.919421224478927,0,0.369754010166788,0.697204805222715,1.13735385989937,0,1.10799081706375,0.802177789880567,1.51907609501096,2.46307021663917,0.32389366601898,1.28787783817093,0.581592955118259,1.51150377475524,0.242584061187816,0,0.411167888021826,0.309706370895104,0.863077176966451,1.2808035326455,1.41889337933151,1.37898272294647,1.93645405075148,0,0.376484679085209,0.818718450173537,0.674170453335254,0.306083892370903,0.962787081228281,2.55734850319616,0.329851300186716,1.59570926097305,0.852449501065388,1.16083695451434,0,0.622822248995575,1.25624332628372,3.12889751052121,1.52032191293582,1.21079900526674,1.47311054395026,1.89877432464531,1.05627643155971,1.4882300997553,0.838634582033504,1.46027220490444,1.20141514273205,1.76798145366788,1.99508920618874,0.99458338599545,1.0959849225878,0,1.09227722252426,2.66852776159066,0.853460445133014,3.2031678962881,0.574752439954483,0.661044872784862,0.954053754535364,1.1384259382189,4.11066032559657,1.52909291250092,0,0.560508562981536,1.05353633910031,0.196709770113833,0.393010762749165,0.822405995998037,1.33749196312542,0,0.473447805734733,0,0.668462741311041,0.294605907474837,0.664601683750863,0.541607727530031,0.640456598628376,0.260118695119756,0.328875809207352,0,0.579606171470105,0.741432815810302,0.802622484269139,1.04535523804977,0.566546713487831,0,0.34362744548263,0.506039384039006,0.637130828648193,0,0,1.20460095262218,1.79181255616186,2.49861453104692,0.710331756132051,0,0.403213486449465,0.534880391567015,0.579297615531196,0,0,0.895037932904712,0.722878304769133,0,0.579386075843295,0.795285947051099,0.486634870302636,0.661743720148475,0.886917589850256,0.614843499851882,1.89919659471683,0,0,1.62273696827342,1.74129737299267,1.72845348674525,1.66943437013739,0.571994910780128,1.48583000531826,1.19257444420023,0,1.04142150482278,0,0.419499436209906,0.550236083880135,0.417989933073621,0.258416759169329,1.06729878806013,2.67776490211736,2.41697590265488,0.760272105718513,0.488124115096339,0.735326160691737,0.81014194788176,1.25019619597712,0.898117490504679,1.12611480483322,0,1.89853131913626,0.183201743930407,11.8602375692457,15.511210565933,0,0.993943903390637,0.759783069987479,2.38336525463794,2.29469296599051,1.41867352879343,0,0,0.24666754841716,0.622422070799533,0.942974704487816,0.653847612453835,0.454072282934794,0.576175924479999,0.937285727335186,0.936480230490962,1.1409436430889,0.448346041655403,0.939475989150119,0.323745888736263,0.98315564691574,1.63323337003915,0.122834317311768,0.619954687054593,0,0.247266929278557,0.910161361938026,0,1.5150250255866,1.25118519871964,1.38532057742091,0.438977620880838,0.612975591598039,0.150238058906597,0.453728732640084,2.15267562826634,0.640672166455702,0.423863802319124,2.10063767259082,1.03052529238439,1.03056216018252,0.744467425326359,1.68776332241266,0.584622030967192,1.00973509697646,0.184099797284599,0.646584227275248,1.77504796258307,1.10827308050404,0.169560592310488,0.966304265816484,0.545492241181669,0.573609190778008,0.609868530647977,0.662648841607426,0.813357600086629,0.932949495138334,1.00928340350251,2.55484151353081,0,0,0,0,0.721879481669586,0,0.168584690078102,0.964044119533928,0.441175890929576,0.217879444092406,0.949082476444386,0.539325232640658,0.588664395376038,0.38474715694639,0,0,0.8231480226628,0,1.26755034821831,0.982827216677626,0.590789906681404,1.7658523976586,0.614942192715568,0.514703430895577,0.548751427043128,0,0.603173834469785,1.11106134190236,0.651616610620649,1.03993478527958,1.44331342025273,0,0.469634776943287,0.577465791044295,0.462985512576611,0.380508304469197,0,0,0.492434012174795,0.468008530278475,1.18904929830983,0,0.335964256397719,0.992425680696705,0.985143749731331,0.581267877027924,0.383382679165211,0.492663237895943,1.84901711427775,3.31724984865235,4.03535869567492,2.27236380167484,1.07946420296687,0.381988425558278,1.17217447210047,0,0.308482478109971,0.300343057843917,0.571652865261156,0.560655421726804,0.43596006883328,0.4400297149257,0.517086863031111,3.57656445851882,0.845302752556,0.26593811658487,1.04007436911366,0.771622122786426,0,0.266422179016099,0.57191197463259,0,0.823240336780769,0,0.355391948742546,0,0,0,0.199945982364114,1.2162378064119,0,0,0.718874566474748,0,1.42636905040718,0.868687840005475,0.410952645100767,0.716243852959582,0.448340575974109,0.788123040807709,0.431255149719035,0.77005821767849,0.508189248444927,0,0.773288812777695,0.335032530668698,0,5.24304916763028,2.99161459204025,5.38740167466846,0.858840442033979,0,0.271265023699736,0.207970861530807,0.713715955188647,0.315404830067869,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| ||
|short_description=p2@TAF1 | |||
}} | }} |
Latest revision as of 07:11, 16 September 2015
Short description: | p2@TAF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TAF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000373790, ENST00000395779, ENST00000423759, ENST00000449580, ENST00000538124, NM_004606, NM_138923, uc004dzt.3, uc004dzu.3_5end |
EntrezGene: | TAF1 |
HGNC: | 11535 |
UniProt: | P21675A8MWR5B1Q2X3F5GWC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.92e-11 | 108 |
common myeloid progenitor | 2.92e-11 | 108 |
hematopoietic stem cell | 8.18e-09 | 168 |
hematopoietic oligopotent progenitor cell | 2.39e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.39e-08 | 161 |
myeloid leukocyte | 7.67e-08 | 72 |
hematopoietic cell | 2.72e-07 | 177 |
myeloid lineage restricted progenitor cell | 9.92e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.63e-14 | 114 |
hematopoietic system | 4.26e-08 | 98 |
blood island | 4.26e-08 | 98 |
hemolymphoid system | 2.39e-07 | 108 |