FFCP PHASE1:Hg19::chrX:48910981..48911000,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:48910981..48911000,+ to FFCP PHASE1:Hg19::chrX:48910981..48911000,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90060 | |EntrezGene=90060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=28910 | |HGNC=28910 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-100bp_to_uc010nik.2_5end | |||
|cluster_id=chrX:48910981..48911000,+ | |||
|description=CAGE_peak_3_at_CCDC120_5end | |||
|id=chrX:48910981..48911000,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.75e-27!115;UBERON:0001049!4.47e-17!57;UBERON:0005068!4.47e-17!57;UBERON:0006241!4.47e-17!57;UBERON:0007135!4.47e-17!57;UBERON:0003075!3.58e-15!86;UBERON:0007284!3.58e-15!86;UBERON:0002616!3.92e-15!59;UBERON:0003080!5.14e-14!42;UBERON:0002346!6.05e-14!90;UBERON:0002780!1.53e-13!41;UBERON:0001890!1.53e-13!41;UBERON:0006240!1.53e-13!41;UBERON:0000955!1.53e-11!69;UBERON:0006238!1.53e-11!69;UBERON:0001893!1.13e-10!34;UBERON:0003056!1.55e-10!61;UBERON:0002020!1.74e-10!34;UBERON:0003528!1.74e-10!34;UBERON:0002791!3.36e-10!33;UBERON:0001869!6.68e-10!32;UBERON:0001017!1.61e-09!82;UBERON:0005743!2.10e-09!86;UBERON:0002619!1.88e-08!22;UBERON:0000025!3.43e-08!194;UBERON:0000033!2.32e-07!123;UBERON:0004111!2.41e-07!241;UBERON:0001950!2.43e-07!20;UBERON:0000477!2.69e-07!286;UBERON:0000956!2.73e-07!25;UBERON:0000203!2.73e-07!25;UBERON:0000153!4.56e-07!129;UBERON:0007811!4.56e-07!129;UBERON:0000073!6.11e-07!94;UBERON:0001016!6.11e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.24e-12;41!UBERON:0001890;4.24e-12;41!UBERON:0001893;1.92e-11;34!UBERON:0002619;3.49e-11;22!UBERON:0003528;4.04e-11;34!UBERON:0002020;4.04e-11;34!UBERON:0000073;4.12e-11;53!UBERON:0002616;4.12e-11;53!UBERON:0001869;7.89e-11;32!UBERON:0002791;8.84e-11;32!UBERON:0001950;1.41e-09;20!UBERON:0000956;4.93e-09;25!UBERON:0000203;4.93e-09;25!UBERON:0007023;1.37e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.49e-33,114;UBERON:0001049,5.40e-20,56;UBERON:0005068,5.40e-20,56;UBERON:0006241,5.40e-20,56;UBERON:0007135,5.40e-20,56;UBERON:0000073,6.89e-20,53;UBERON:0002616,6.89e-20,53;UBERON:0002780,9.95e-17,41;UBERON:0001890,9.95e-17,41;UBERON:0003080,9.95e-17,41;UBERON:0006240,9.95e-17,41;UBERON:0003075,6.91e-16,82;UBERON:0007284,6.91e-16,82;UBERON:0002346,4.63e-15,86;UBERON:0000955,2.78e-14,68;UBERON:0006238,2.78e-14,68;UBERON:0010371,3.23e-14,104;UBERON:0001893,2.03e-13,34;UBERON:0003528,3.66e-13,34;UBERON:0002020,3.66e-13,34;UBERON:0003056,2.21e-12,61;UBERON:0002791,2.32e-12,32;UBERON:0001869,2.38e-12,32;UBERON:0001017,3.74e-12,81;UBERON:0002619,2.87e-11,22;UBERON:0010314,3.95e-10,132;UBERON:0001950,1.04e-09,20;UBERON:0001016,2.25e-09,89;UBERON:0000956,4.11e-09,25;UBERON:0000203,4.11e-09,25;UBERON:0000025,1.30e-07,192;UBERON:0004121,1.42e-07,171;UBERON:0000924,1.42e-07,171;UBERON:0006601,1.42e-07,171 | |||
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| ||
|short_description=p3@CCDC120 | |||
}} | }} |
Latest revision as of 20:54, 15 September 2015
Short description: | p3@CCDC120 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC120_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_uc010nik.2_5end |
EntrezGene: | CCDC120 |
HGNC: | 28910 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.49e-33 | 114 |
neural tube | 5.40e-20 | 56 |
neural rod | 5.40e-20 | 56 |
future spinal cord | 5.40e-20 | 56 |
neural keel | 5.40e-20 | 56 |
regional part of nervous system | 6.89e-20 | 53 |
regional part of brain | 6.89e-20 | 53 |
regional part of forebrain | 9.95e-17 | 41 |
forebrain | 9.95e-17 | 41 |
anterior neural tube | 9.95e-17 | 41 |
future forebrain | 9.95e-17 | 41 |
neural plate | 6.91e-16 | 82 |
presumptive neural plate | 6.91e-16 | 82 |
neurectoderm | 4.63e-15 | 86 |
brain | 2.78e-14 | 68 |
future brain | 2.78e-14 | 68 |
ecto-epithelium | 3.23e-14 | 104 |
telencephalon | 2.03e-13 | 34 |
brain grey matter | 3.66e-13 | 34 |
gray matter | 3.66e-13 | 34 |
pre-chordal neural plate | 2.21e-12 | 61 |
regional part of telencephalon | 2.32e-12 | 32 |
cerebral hemisphere | 2.38e-12 | 32 |
central nervous system | 3.74e-12 | 81 |
regional part of cerebral cortex | 2.87e-11 | 22 |
structure with developmental contribution from neural crest | 3.95e-10 | 132 |
neocortex | 1.04e-09 | 20 |
nervous system | 2.25e-09 | 89 |
cerebral cortex | 4.11e-09 | 25 |
pallium | 4.11e-09 | 25 |
tube | 1.30e-07 | 192 |
ectoderm-derived structure | 1.42e-07 | 171 |
ectoderm | 1.42e-07 | 171 |
presumptive ectoderm | 1.42e-07 | 171 |