FFCP PHASE1:Hg19::chrX:40944690..40944704,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:40944690..40944704,+ to FFCP PHASE1:Hg19::chrX:40944690..40944704,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8239 | |EntrezGene=8239 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12632 | |HGNC=12632 | ||
|TSSclassifier=strong | |||
|UniProt=Q93008,Q6P468,Q86X58 | |UniProt=Q93008,Q6P468,Q86X58 | ||
|association_with_transcript=-183bp_to_ENST00000324545,ENST00000378308,NM_001039590,NM_001039591,uc004dfb.2,uc004dfc.2_5end | |||
|cluster_id=chrX:40944690..40944704,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_1_at_USP9X_5end | |||
|id=chrX:40944690..40944704,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.24e-09!76;CL:0000839!7.12e-09!70;CL:0000860!3.22e-08!45;CL:0002194!3.57e-08!63;CL:0000576!3.57e-08!63;CL:0000040!3.57e-08!63;CL:0000559!3.57e-08!63;CL:0002009!3.72e-08!65;CL:0000557!9.34e-08!71;CL:0002057!1.54e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.90e-07;33!CL:0002057;2.90e-07;33!CL:0000473;6.27e-07;39!CL:0000234;6.27e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.07e-08,72;CL:0000473,4.19e-08,48;CL:0000234,4.19e-08,48;CL:0000839,6.00e-08,66;CL:0000860,1.54e-07,42;CL:0002057,1.54e-07,42;CL:0002194,2.96e-07,59;CL:0000576,2.96e-07,59;CL:0000040,2.96e-07,59;CL:0000559,2.96e-07,59;CL:0002009,3.04e-07,61;CL:0000557,7.03e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@USP9X | |||
}} | }} |
Latest revision as of 01:49, 25 September 2015
Short description: | p1@USP9X |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USP9X_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -183bp_to_ENST00000324545, ENST00000378308, NM_001039590, NM_001039591, uc004dfb.2, uc004dfc.2_5end |
EntrezGene: | USP9X |
HGNC: | 12632 |
UniProt: | Q93008Q6P468Q86X58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.07e-08 | 72 |
defensive cell | 4.19e-08 | 48 |
phagocyte | 4.19e-08 | 48 |
myeloid lineage restricted progenitor cell | 6.00e-08 | 66 |
classical monocyte | 1.54e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.54e-07 | 42 |
monopoietic cell | 2.96e-07 | 59 |
monocyte | 2.96e-07 | 59 |
monoblast | 2.96e-07 | 59 |
promonocyte | 2.96e-07 | 59 |
macrophage dendritic cell progenitor | 3.04e-07 | 61 |
granulocyte monocyte progenitor cell | 7.03e-07 | 67 |