FFCP PHASE1:Hg19::chrX:135863364..135863379,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:135863364..135863379,- to FFCP PHASE1:Hg19::chrX:135863364..135863379,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9459 | |EntrezGene=9459 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=685 | |HGNC=685 | ||
|TSSclassifier=strong | |||
|UniProt=F5H8B2,Q15052,Q8N4Q3 | |UniProt=F5H8B2,Q15052,Q8N4Q3 | ||
|association_with_transcript=123bp_to_ENST00000535736,NM_004840,uc004fab.2_5end | |||
|cluster_id=chrX:135863364..135863379,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_7_at_ARHGEF6_5end | |||
|id=chrX:135863364..135863379,- | |||
|ontology_enrichment_celltype=CL:0000037!9.46e-60!172;CL:0000566!9.46e-60!172;CL:0002032!2.46e-54!165;CL:0000837!2.46e-54!165;CL:0000988!2.46e-53!182;CL:0000738!1.49e-46!140;CL:0002087!1.94e-39!119;CL:0000763!3.92e-38!112;CL:0000049!3.92e-38!112;CL:0002031!6.89e-38!124;CL:0000766!3.96e-29!76;CL:0000557!4.81e-25!71;CL:0002009!1.27e-23!65;CL:0000839!2.04e-23!70;CL:0002057!2.87e-23!42;CL:0002194!3.42e-23!63;CL:0000576!3.42e-23!63;CL:0000040!3.42e-23!63;CL:0000559!3.42e-23!63;CL:0000860!1.45e-20!45;CL:0000542!7.59e-14!53;CL:0000051!7.59e-14!53;CL:0000838!1.71e-13!52;CL:0000134!5.04e-11!358;CL:0002320!5.12e-10!365;CL:0000084!1.33e-08!25;CL:0000827!1.33e-08!25;CL:0002393!6.98e-08!9;CL:0002397!6.98e-08!9;CL:0000219!8.06e-08!390;CL:0000094!8.64e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.43e-17;48!CL:0000860;1.19e-16;33!CL:0002057;1.19e-16;33!CL:0000766;1.93e-14;69!CL:0000763;4.71e-13;100!CL:0000473;6.77e-12;39!CL:0000234;6.77e-12;39!CL:0002087;8.29e-11;104!CL:0000988;3.17e-10;177!CL:0000094;4.22e-10;8!CL:0000738;7.28e-10;136!CL:0002393;2.18e-08;6!CL:0002397;2.18e-08;6!CL:0000081;7.41e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.16e-55,168;CL:0000988,3.01e-51,177;CL:0002032,1.37e-48,161;CL:0000837,1.37e-48,161;CL:0000738,1.07e-40,136;CL:0000763,4.92e-40,108;CL:0000049,4.92e-40,108;CL:0002087,2.12e-34,115;CL:0000766,1.42e-30,72;CL:0002031,2.83e-29,120;CL:0000860,7.52e-28,42;CL:0002057,7.52e-28,42;CL:0002194,7.19e-25,59;CL:0000576,7.19e-25,59;CL:0000040,7.19e-25,59;CL:0000559,7.19e-25,59;CL:0000473,2.33e-24,48;CL:0000234,2.33e-24,48;CL:0002009,1.22e-23,61;CL:0000557,4.74e-23,67;CL:0000839,3.70e-22,66;CL:0000134,6.50e-15,354;CL:0002320,4.43e-14,361;CL:0000219,8.63e-12,386;CL:0002393,1.39e-11,9;CL:0002397,1.39e-11,9;CL:0000094,7.35e-10,8;CL:0000838,8.07e-09,52;CL:0000542,1.58e-08,53;CL:0000051,1.58e-08,53;CL:0000034,2.98e-08,441;CL:0000048,3.51e-08,427;CL:0000723,1.00e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;7.91e-20;42!CL:0000049;1.45e-11;108 | |||
|ontology_enrichment_disease=DOID:1240!2.49e-15!39;DOID:2531!5.27e-15!51;DOID:0060083!5.27e-15!51;DOID:8692!6.96e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.79e-14;31!DOID:1240;6.21e-14;39!DOID:2531;1.19e-10;51!DOID:0060083;1.19e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,7.60e-18,39;DOID:2531,1.12e-16,51;DOID:0060083,1.12e-16,51;DOID:8692,9.89e-15,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.08e-29!102;UBERON:0003061!2.08e-29!102;UBERON:0002193!1.93e-25!112;UBERON:0002371!7.86e-21!80;UBERON:0001474!5.81e-19!86;UBERON:0007023!1.41e-17!115;UBERON:0004765!7.44e-14!101;UBERON:0001434!7.44e-14!101;UBERON:0002405!4.77e-13!115;UBERON:0002384!4.62e-10!375;UBERON:0001049!1.86e-07!57;UBERON:0005068!1.86e-07!57;UBERON:0006241!1.86e-07!57;UBERON:0007135!1.86e-07!57;UBERON:0000178!9.01e-07!15;UBERON:0000179!9.01e-07!15;UBERON:0000463!9.01e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.67e-09;15!UBERON:0000179;1.67e-09;15!UBERON:0000463;1.67e-09;15!UBERON:0002390;5.42e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.12e-31,98;UBERON:0003061,2.12e-31,98;UBERON:0002193,9.47e-27,108;UBERON:0002371,4.14e-20,76;UBERON:0002405,3.16e-19,93;UBERON:0001474,1.11e-17,82;UBERON:0004765,5.63e-15,90;UBERON:0002384,1.38e-13,371;UBERON:0001434,2.97e-12,100;UBERON:0000178,2.00e-09,15;UBERON:0000179,2.00e-09,15;UBERON:0000463,2.00e-09,15;UBERON:0003081,7.89e-08,203 | |||
|phase1_expression=0.181678379270557,0.428201047781966,1.40954404095971,0,1.34088328328186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.236132343941038,1.18009283054671,3.0706351847777,2.16742572642506,0,0,0,0.0774672005803016,1.42169232487422,3.81680571135301,2.76997704265939,2.60707781711184,1.73608696572681,0.895661896959697,0.647787332037959,1.54545340580512,1.89017710413434,1.88937971844405,0.485168122375632,1.16214518452842,1.23350366406548,2.78735733805593,1.7261543539329,1.7931249457037,2.12834006899727,1.37898272294647,1.93645405075148,0,1.12945403725563,0.272906150057846,0.674170453335254,0.918251677112708,2.56743221660875,1.91801137739712,1.64925650093358,1.39624560335142,1.27867425159808,0.580418477257168,1.70215567407342,1.86846674698672,2.00998932205395,1.0429658368404,2.38907729175628,0.605399502633369,1.10483290796269,2.84816148696796,5.0701268714866,4.889898899196,3.35453832813401,5.16711703273877,7.35866774923381,9.48280961512773,1.71007646244749,3.18266683518544,2.19196984517561,1.75996244461323,1.09227722252426,3.55803701545422,2.98711155796555,1.60158394814405,2.29900975981793,1.32208974556972,0.954053754535364,0,0,0.764546456250458,2.64342657158052,1.12101712596307,1.31692042387539,1.7703879310245,0.786021525498329,0.411202997999018,0.83593247695339,0.977766799900771,1.4203434172042,1.94826728407911,1.78256731016278,0,0,0.541607727530031,1.28091319725675,0.780356085359269,2.63100647365882,3.03985019564433,4.92665245749589,3.55887751588945,4.0131124213457,0,2.03956816855619,1.14966148080576,1.03088233644789,0.759059076058509,2.54852331459277,0,0.950452044448374,2.40920190524436,2.43174561193395,2.49861453104692,1.89421801635213,1.64225599384209,1.00803371612366,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0.324547393654683,1.56716763569341,0.930705723632056,2.14641561874808,1.71598473234038,3.71457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309157587715317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.984868024349589,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,1.67292024625129,0.829312462163088,0.576479813667846,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,3.02629888782524,1.97030760201927,0.862510299438069,0.513372145118994,0,0,0,0.335032530668698,0,1.49801404789436,8.97484377612075,4.14415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.60818530127658,0,0,4.54889657470352,3.01999881146064,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.515205058238611,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0.322260734604821,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0.899362287916574,0.274537029736055,0,0,0,0,0,0,1.05650146756755,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,2.02979043692868,0.764637207142375,2.27858874869665,3.81170840732462,2.05681136543097,5.18778648954174,4.32025149790492,2.37937552888281,0,0,0,0.929015875628594,2.74111504655245,2.06311345710401,8.29016618189876,2.99369057149225,3.06408592211787,2.96343015813436,2.921597462471,3.93116049358842,3.42352018549788,5.01375666473674,0,0.846458889008016,5.62058262862948,6.25579092292247,6.81353980304522,4.12206413706918,1.53620382154229,1.11838053946208,1.33479313369527,3.32159762183469,0.278406173895242,1.23087398947712,0.811367035427949,4.32993558397166,0,0,5.12778627451629,0,0.780103689942349,0,0,0,0,0,0.984685914873589,0,0.988823245360557,0,0.796991953004279,1.10513566212459,0,0.20453736500431,0,0,0,0,4.09257896181497,0.887790650732402,2.3948309234694,0,0.969332746095218,0.0927680981618513,0,0,0.0874599999961957,1.44999915086959,0,0,0,0,0.874813840149763,0,0,0.964771509003264,0,0.552896299656123,0.295547618953547,0.219385397153973,0,0,0.923403102045565,0,0,0,0,0,0.183195186803725,0,9.19739683761629,1.8837630767403,0.997270091400938,0,0,0,0,1.90723894776454,0,0,0,0,0,0.530745387020035,0,0,0,0,1.68502832451693,1.60515529459758,0.702793337176017,3.28418620588199,0,0,0,1.20990716048664,0,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0.50648636764703,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.684526894459965,2.55493176133945,0,0,0.837847203816763,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0,1.59045937961861,1.36203406111576,0,0,0,0.2249738915515,0.77380195455795,0.303747783290123,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0.326587360109409,0,3.69416343372025,0.170388021785422,0,0,0,1.809961389061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| ||
|short_description=p7@ARHGEF6 | |||
}} | }} |
Latest revision as of 15:25, 19 September 2015
Short description: | p7@ARHGEF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ARHGEF6_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 123bp_to_ENST00000535736, NM_004840, uc004fab.2_5end |
EntrezGene: | ARHGEF6 |
HGNC: | 685 |
UniProt: | F5H8B2Q15052Q8N4Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.12e-31 | 98 |
blood island | 2.12e-31 | 98 |
hemolymphoid system | 9.47e-27 | 108 |
bone marrow | 4.14e-20 | 76 |
immune system | 3.16e-19 | 93 |
bone element | 1.11e-17 | 82 |
skeletal element | 5.63e-15 | 90 |
connective tissue | 1.38e-13 | 371 |
skeletal system | 2.97e-12 | 100 |
blood | 2.00e-09 | 15 |
haemolymphatic fluid | 2.00e-09 | 15 |
organism substance | 2.00e-09 | 15 |
lateral plate mesoderm | 7.89e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
leukemia | 7.60e-18 | 39 |
hematologic cancer | 1.12e-16 | 51 |
immune system cancer | 1.12e-16 | 51 |
myeloid leukemia | 9.89e-15 | 31 |