FFCP PHASE1:Hg19::chrX:134167069..134167118,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:134167069..134167118,+ to FFCP PHASE1:Hg19::chrX:134167069..134167118,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8933 | |EntrezGene=8933 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=2569 | |HGNC=2569 | ||
|TSSclassifier=strong | |||
|UniProt=O15255 | |UniProt=O15255 | ||
|association_with_transcript=338bp_to_CR456853,D88756,DQ891384,EU176632_5end | |||
|cluster_id=chrX:134167069..134167118,+ | |||
|coexpression_cluster_id=C4851 | |||
|description=CAGE_peak_3_at_FAM127A_5end | |||
|id=chrX:134167069..134167118,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.74e-17!180;CL:0000183!1.08e-11!59;CL:0000393!3.86e-11!60;CL:0000211!3.86e-11!60;CL:0000192!2.06e-10!42;CL:0000514!2.06e-10!42;CL:0000680!2.46e-10!57;CL:0000056!2.46e-10!57;CL:0000355!2.46e-10!57;CL:0000222!3.01e-10!119;CL:0000187!3.90e-10!54;CL:0002321!1.98e-08!248;CL:0000220!3.16e-08!246;CL:0000359!1.11e-07!32;CL:0000057!4.74e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.53e-08;43!CL:0000359;1.36e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,7.88e-12,61;CL:0000211,7.88e-12,61;CL:0000192,4.48e-11,43;CL:0000514,4.48e-11,43;CL:0000680,5.62e-11,58;CL:0000056,5.62e-11,58;CL:0000355,5.62e-11,58;CL:0000187,9.23e-11,55;CL:0000222,6.42e-09,121;CL:0000359,7.11e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000514;1.53e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.53e-18!365;UBERON:0000468!7.92e-18!659;UBERON:0000119!4.97e-16!312;UBERON:0000483!8.22e-16!309;UBERON:0000477!4.10e-14!286;UBERON:0000486!2.75e-13!82;UBERON:0004111!2.76e-13!241;UBERON:0000914!3.67e-13!83;UBERON:0002329!3.67e-13!83;UBERON:0003077!3.67e-13!83;UBERON:0003059!3.67e-13!83;UBERON:0007282!3.67e-13!83;UBERON:0009618!3.67e-13!83;UBERON:0007285!3.67e-13!83;UBERON:0005256!9.97e-13!143;UBERON:0004290!1.30e-12!70;UBERON:0000467!6.30e-12!625;UBERON:0002385!7.84e-12!63;UBERON:0001015!7.84e-12!63;UBERON:0000383!7.84e-12!63;UBERON:0001134!9.64e-12!61;UBERON:0002036!9.64e-12!61;UBERON:0003082!9.64e-12!61;UBERON:0000480!1.27e-11!626;UBERON:0000481!1.33e-11!347;UBERON:0000922!5.17e-11!612;UBERON:0000025!1.01e-10!194;UBERON:0002100!2.55e-10!216;UBERON:0002049!4.07e-10!79;UBERON:0007798!4.07e-10!79;UBERON:0004872!4.81e-10!84;UBERON:0000923!9.46e-10!604;UBERON:0005291!9.46e-10!604;UBERON:0006598!9.46e-10!604;UBERON:0002532!9.46e-10!604;UBERON:0002050!9.90e-10!605;UBERON:0005423!9.90e-10!605;UBERON:0001981!6.24e-09!60;UBERON:0007500!6.24e-09!60;UBERON:0004537!6.24e-09!60;UBERON:0006965!6.24e-09!60;UBERON:0000055!9.65e-09!69;UBERON:0003914!3.11e-08!118;UBERON:0001637!3.45e-08!42;UBERON:0003509!3.45e-08!42;UBERON:0004572!3.45e-08!42;UBERON:0000490!5.35e-08!138;UBERON:0007023!1.14e-07!115;UBERON:0001017!7.11e-07!82;UBERON:0004573!7.42e-07!33;UBERON:0004571!7.42e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.41e-15,309;UBERON:0000483,2.36e-15,306;UBERON:0007503,1.63e-14,78;UBERON:0007524,5.71e-14,73;UBERON:0000486,9.62e-14,83;UBERON:0003077,1.19e-13,72;UBERON:0007285,1.19e-13,72;UBERON:0002329,2.22e-13,71;UBERON:0003059,2.22e-13,71;UBERON:0007282,2.22e-13,71;UBERON:0004290,2.22e-13,71;UBERON:0009618,2.22e-13,71;UBERON:0002385,1.45e-12,64;UBERON:0001015,1.45e-12,64;UBERON:0000383,1.45e-12,64;UBERON:0003104,1.55e-12,160;UBERON:0009142,1.55e-12,160;UBERON:0001134,1.81e-12,62;UBERON:0002036,1.81e-12,62;UBERON:0003082,1.81e-12,62;UBERON:0005256,3.86e-12,122;UBERON:0004111,6.76e-12,240;UBERON:0002049,1.54e-09,78;UBERON:0007798,1.54e-09,78;UBERON:0004872,1.61e-09,83;UBERON:0000025,3.42e-09,192;UBERON:0000490,1.10e-08,148;UBERON:0007500,2.22e-08,59;UBERON:0001981,2.22e-08,59;UBERON:0004537,2.22e-08,59;UBERON:0006965,2.22e-08,59;UBERON:0001637,2.58e-08,42;UBERON:0003509,2.58e-08,42;UBERON:0004572,2.58e-08,42;UBERON:0000055,3.00e-08,68;UBERON:0000922,4.61e-08,592;UBERON:0007023,6.19e-08,114;UBERON:0000923,8.27e-08,560;UBERON:0010316,8.27e-08,560;UBERON:0005291,8.27e-08,560;UBERON:0006598,8.27e-08,560;UBERON:0010317,8.27e-08,560;UBERON:0002532,8.27e-08,560;UBERON:0002050,8.36e-08,564;UBERON:0002100,8.80e-08,199;UBERON:0003914,1.13e-07,117;UBERON:0005423,1.55e-07,581;UBERON:0010314,5.45e-07,132;UBERON:0004573,6.71e-07,33;UBERON:0004571,6.71e-07,33 | |||
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| ||
|short_description=p3@FAM127A | |||
}} | }} |
Latest revision as of 13:25, 19 September 2015
Short description: | p3@FAM127A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM127A_5end |
Coexpression cluster: | C4851_Osteoblast_occipital_skeletal_Adipocyte_Mesenchymal_leiomyoma_Smooth |
Association with transcript: | 338bp_to_CR456853, D88756, DQ891384, EU176632_5end |
EntrezGene: | FAM127A |
HGNC: | 2569 |
UniProt: | O15255 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 7.88e-12 | 61 |
electrically active cell | 7.88e-12 | 61 |
smooth muscle cell | 4.48e-11 | 43 |
smooth muscle myoblast | 4.48e-11 | 43 |
muscle precursor cell | 5.62e-11 | 58 |
myoblast | 5.62e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.62e-11 | 58 |
muscle cell | 9.23e-11 | 55 |
mesodermal cell | 6.42e-09 | 121 |
vascular associated smooth muscle cell | 7.11e-08 | 32 |