FFCP PHASE1:Hg19::chrX:131353467..131353485,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:131353467..131353485,- to FFCP PHASE1:Hg19::chrX:131353467..131353485,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57826 | |EntrezGene=57826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21165 | |HGNC=21165 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000490400,uc004ewq.3,uc010nrk.2_5end | |||
|cluster_id=chrX:131353467..131353485,- | |||
|description=CAGE_peak_3_at_RAP2C_5end | |||
|id=chrX:131353467..131353485,- | |||
|ontology_enrichment_celltype=CL:0000738!1.59e-29!140;CL:0002031!1.74e-25!124;CL:0000766!1.30e-23!76;CL:0002087!9.42e-23!119;CL:0000839!3.64e-22!70;CL:0000557!9.86e-22!71;CL:0002009!2.05e-20!65;CL:0002194!1.66e-19!63;CL:0000576!1.66e-19!63;CL:0000040!1.66e-19!63;CL:0000559!1.66e-19!63;CL:0000037!3.39e-19!172;CL:0000566!3.39e-19!172;CL:0002032!5.67e-18!165;CL:0000837!5.67e-18!165;CL:0002057!1.33e-17!42;CL:0000860!2.41e-17!45;CL:0000988!3.08e-17!182;CL:0000763!1.05e-13!112;CL:0000049!1.05e-13!112;CL:0000134!5.64e-13!358;CL:0002320!3.97e-11!365;CL:0000219!4.61e-08!390;CL:0002393!3.90e-07!9;CL:0002397!3.90e-07!9;CL:0000451!5.24e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.44e-12;33!CL:0002057;6.44e-12;33!CL:0000473;7.04e-12;39!CL:0000234;7.04e-12;39!CL:0000576;3.31e-11;48!CL:0000766;1.28e-10;69!CL:0002087;1.83e-07;104!CL:0000738;2.08e-07;136!CL:0000451;2.83e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.47e-30,136;CL:0002031,9.89e-26,120;CL:0000766,3.50e-24,72;CL:0002087,6.20e-23,115;CL:0000839,9.91e-23,66;CL:0000557,2.90e-22,67;CL:0002009,6.03e-21,61;CL:0002194,5.17e-20,59;CL:0000576,5.17e-20,59;CL:0000040,5.17e-20,59;CL:0000559,5.17e-20,59;CL:0000473,8.53e-20,48;CL:0000234,8.53e-20,48;CL:0000037,1.73e-19,168;CL:0002032,3.95e-18,161;CL:0000837,3.95e-18,161;CL:0000860,6.44e-18,42;CL:0002057,6.44e-18,42;CL:0000988,6.74e-18,177;CL:0000763,6.56e-14,108;CL:0000049,6.56e-14,108;CL:0000134,3.27e-13,354;CL:0002320,2.21e-11,361;CL:0000219,6.24e-08,386;CL:0002393,3.03e-07,9;CL:0002397,3.03e-07,9;CL:0000451,4.09e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;2.54e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.09e-20!80;UBERON:0002390!7.62e-20!102;UBERON:0003061!7.62e-20!102;UBERON:0002193!3.75e-18!112;UBERON:0001474!2.35e-17!86;UBERON:0002405!2.86e-16!115;UBERON:0004765!2.29e-14!101;UBERON:0001434!2.29e-14!101;UBERON:0002384!8.22e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.37e-20,76;UBERON:0002390,4.08e-20,98;UBERON:0003061,4.08e-20,98;UBERON:0002193,3.16e-18,108;UBERON:0002405,2.04e-17,93;UBERON:0001474,2.86e-17,82;UBERON:0004765,5.84e-14,90;UBERON:0001434,1.21e-12,100;UBERON:0002384,5.24e-11,371;UBERON:0003081,4.43e-07,203 | |||
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| ||
|short_description=p3@RAP2C | |||
}} | }} |
Latest revision as of 11:15, 19 September 2015
Short description: | p3@RAP2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAP2C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000490400, uc004ewq.3, uc010nrk.2_5end |
EntrezGene: | RAP2C |
HGNC: | 21165 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.47e-30 | 136 |
hematopoietic lineage restricted progenitor cell | 9.89e-26 | 120 |
myeloid leukocyte | 3.50e-24 | 72 |
nongranular leukocyte | 6.20e-23 | 115 |
myeloid lineage restricted progenitor cell | 9.91e-23 | 66 |
granulocyte monocyte progenitor cell | 2.90e-22 | 67 |
macrophage dendritic cell progenitor | 6.03e-21 | 61 |
monopoietic cell | 5.17e-20 | 59 |
monocyte | 5.17e-20 | 59 |
monoblast | 5.17e-20 | 59 |
promonocyte | 5.17e-20 | 59 |
defensive cell | 8.53e-20 | 48 |
phagocyte | 8.53e-20 | 48 |
hematopoietic stem cell | 1.73e-19 | 168 |
hematopoietic oligopotent progenitor cell | 3.95e-18 | 161 |
hematopoietic multipotent progenitor cell | 3.95e-18 | 161 |
classical monocyte | 6.44e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.44e-18 | 42 |
hematopoietic cell | 6.74e-18 | 177 |
myeloid cell | 6.56e-14 | 108 |
common myeloid progenitor | 6.56e-14 | 108 |
mesenchymal cell | 3.27e-13 | 354 |
connective tissue cell | 2.21e-11 | 361 |
motile cell | 6.24e-08 | 386 |
intermediate monocyte | 3.03e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.03e-07 | 9 |
dendritic cell | 4.09e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.37e-20 | 76 |
hematopoietic system | 4.08e-20 | 98 |
blood island | 4.08e-20 | 98 |
hemolymphoid system | 3.16e-18 | 108 |
immune system | 2.04e-17 | 93 |
bone element | 2.86e-17 | 82 |
skeletal element | 5.84e-14 | 90 |
skeletal system | 1.21e-12 | 100 |
connective tissue | 5.24e-11 | 371 |
lateral plate mesoderm | 4.43e-07 | 203 |