FFCP PHASE1:Hg19::chrX:129244840..129244881,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:129244840..129244881,- to FFCP PHASE1:Hg19::chrX:129244840..129244881,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2000 | |EntrezGene=2000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3319 | |HGNC=3319 | ||
|TSSclassifier=strong | |||
|UniProt=Q99607 | |UniProt=Q99607 | ||
|association_with_transcript=-149bp_to_ENST00000335997_5end | |||
|cluster_id=chrX:129244840..129244881,- | |||
|description=CAGE_peak_2_at_ELF4_5end | |||
|id=chrX:129244840..129244881,- | |||
|ontology_enrichment_celltype=CL:0000037!2.82e-47!172;CL:0000566!2.82e-47!172;CL:0002032!6.72e-45!165;CL:0000837!6.72e-45!165;CL:0000988!1.16e-44!182;CL:0000738!7.42e-39!140;CL:0000763!1.70e-35!112;CL:0000049!1.70e-35!112;CL:0002087!4.21e-33!119;CL:0002031!3.36e-30!124;CL:0000766!4.06e-28!76;CL:0002057!3.88e-24!42;CL:0002194!5.79e-24!63;CL:0000576!5.79e-24!63;CL:0000040!5.79e-24!63;CL:0000559!5.79e-24!63;CL:0002009!8.98e-24!65;CL:0000860!4.78e-23!45;CL:0000557!2.37e-22!71;CL:0000134!3.26e-22!358;CL:0002320!4.40e-22!365;CL:0000839!6.29e-22!70;CL:0000219!1.94e-18!390;CL:0000048!2.05e-13!430;CL:0000723!1.04e-12!436;CL:0000034!2.12e-12!444;CL:0000063!1.81e-09!578;CL:0000838!6.71e-09!52;CL:0000542!8.32e-09!53;CL:0000051!8.32e-09!53;CL:0002371!1.15e-08!591;CL:0000791!9.99e-08!18;CL:0000789!9.99e-08!18;CL:0002420!9.99e-08!18;CL:0002419!9.99e-08!18;CL:0000790!9.99e-08!18;CL:0000144!1.01e-07!625;CL:0000003!2.98e-07!722;CL:0000084!5.35e-07!25;CL:0000827!5.35e-07!25;CL:0002393!5.57e-07!9;CL:0002397!5.57e-07!9;CL:0000115!8.15e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.12e-17;33!CL:0002057;3.12e-17;33!CL:0000576;1.10e-16;48!CL:0000473;2.10e-15;39!CL:0000234;2.10e-15;39!CL:0000766;1.34e-13;69!CL:0000763;9.55e-13;100!CL:0002087;1.40e-10;104!CL:0000738;2.37e-09;136!CL:0000988;1.68e-08;177!CL:0000791;9.72e-08;18!CL:0000789;9.72e-08;18!CL:0002419;9.72e-08;18!CL:0000084;3.36e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.83e-49,168;CL:0002032,1.19e-46,161;CL:0000837,1.19e-46,161;CL:0000988,6.66e-46,177;CL:0000738,2.08e-40,136;CL:0000763,3.27e-37,108;CL:0000049,3.27e-37,108;CL:0002087,1.19e-34,115;CL:0002031,1.09e-31,120;CL:0000766,7.95e-30,72;CL:0002194,1.04e-25,59;CL:0000576,1.04e-25,59;CL:0000040,1.04e-25,59;CL:0000559,1.04e-25,59;CL:0002009,1.87e-25,61;CL:0000473,8.59e-25,48;CL:0000234,8.59e-25,48;CL:0000860,2.94e-24,42;CL:0002057,2.94e-24,42;CL:0000557,6.27e-24,67;CL:0000839,1.70e-23,66;CL:0000134,3.57e-22,354;CL:0002320,5.97e-22,361;CL:0000219,2.43e-18,386;CL:0000048,1.28e-13,427;CL:0000723,6.31e-13,433;CL:0000034,1.34e-12,441;CL:0000838,4.20e-09,52;CL:0000542,5.24e-09,53;CL:0000051,5.24e-09,53;CL:0000791,9.26e-08,18;CL:0000789,9.26e-08,18;CL:0002420,9.26e-08,18;CL:0002419,9.26e-08,18;CL:0000790,9.26e-08,18;CL:0000084,3.97e-07,25;CL:0000827,3.97e-07,25;CL:0000115,5.19e-07,36;CL:0002393,5.21e-07,9;CL:0002397,5.21e-07,9;CL:0002078,8.38e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002057;7.81e-18;42!CL:0000049;9.68e-12;108!CL:0000790;9.72e-08;18 | |||
|ontology_enrichment_disease=DOID:8692!3.34e-11!31;DOID:1240!3.96e-11!39;DOID:2531!2.88e-08!51;DOID:0060083!2.88e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.12e-11;31!DOID:1240;7.92e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.12e-11,31;DOID:1240,3.68e-11,39;DOID:2531,2.15e-08,51;DOID:0060083,2.15e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.22e-29!112;UBERON:0002390!5.80e-27!102;UBERON:0003061!5.80e-27!102;UBERON:0002384!9.49e-23!375;UBERON:0001474!7.69e-21!86;UBERON:0002371!3.24e-20!80;UBERON:0002405!4.79e-18!115;UBERON:0004765!7.87e-17!101;UBERON:0001434!7.87e-17!101;UBERON:0003081!1.45e-14!216;UBERON:0002204!9.25e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.10e-30,108;UBERON:0002390,2.78e-28,98;UBERON:0003061,2.78e-28,98;UBERON:0002405,1.80e-25,93;UBERON:0002384,1.31e-22,371;UBERON:0001474,4.42e-22,82;UBERON:0002371,1.68e-21,76;UBERON:0004765,2.41e-18,90;UBERON:0001434,8.52e-17,100;UBERON:0003081,4.88e-15,203;UBERON:0002204,9.32e-07,167 | |||
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| ||
|short_description=p2@ELF4 | |||
}} | }} |
Latest revision as of 09:36, 19 September 2015
Short description: | p2@ELF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ELF4_5end |
Coexpression cluster: | NA |
Association with transcript: | -149bp_to_ENST00000335997_5end |
EntrezGene: | ELF4 |
HGNC: | 3319 |
UniProt: | Q99607 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.10e-30 | 108 |
hematopoietic system | 2.78e-28 | 98 |
blood island | 2.78e-28 | 98 |
immune system | 1.80e-25 | 93 |
connective tissue | 1.31e-22 | 371 |
bone element | 4.42e-22 | 82 |
bone marrow | 1.68e-21 | 76 |
skeletal element | 2.41e-18 | 90 |
skeletal system | 8.52e-17 | 100 |
lateral plate mesoderm | 4.88e-15 | 203 |
musculoskeletal system | 9.32e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.12e-11 | 31 |
leukemia | 3.68e-11 | 39 |
hematologic cancer | 2.15e-08 | 51 |
immune system cancer | 2.15e-08 | 51 |