FFCP PHASE1:Hg19::chrX:108976449..108976501,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:108976449..108976501,- to FFCP PHASE1:Hg19::chrX:108976449..108976501,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2182 | |EntrezGene=2182 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3571 | |HGNC=3571 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000469857_5end | |||
|cluster_id=chrX:108976449..108976501,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_1_at_ACSL4_5end | |||
|id=chrX:108976449..108976501,- | |||
|ontology_enrichment_celltype=CL:0000766!3.15e-22!76;CL:0000557!7.23e-20!71;CL:0000839!3.50e-19!70;CL:0000763!1.09e-18!112;CL:0000049!1.09e-18!112;CL:0002009!7.72e-18!65;CL:0002057!1.31e-17!42;CL:0002194!2.13e-17!63;CL:0000576!2.13e-17!63;CL:0000040!2.13e-17!63;CL:0000559!2.13e-17!63;CL:0000860!6.83e-16!45;CL:0000048!4.07e-10!430;CL:0000723!4.82e-10!436;CL:0000034!4.91e-09!444;CL:0002320!9.07e-09!365;CL:0000134!2.45e-08!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.65e-17;33!CL:0002057;1.65e-17;33!CL:0000473;3.25e-16;39!CL:0000234;3.25e-16;39!CL:0000576;9.73e-12;48!CL:0000766;3.24e-11;69!CL:0000763;7.73e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.24e-23,72;CL:0000557,8.20e-21,67;CL:0000839,4.16e-20,66;CL:0000473,2.28e-19,48;CL:0000234,2.28e-19,48;CL:0000763,3.34e-19,108;CL:0000049,3.34e-19,108;CL:0002009,9.09e-19,61;CL:0002194,2.47e-18,59;CL:0000576,2.47e-18,59;CL:0000040,2.47e-18,59;CL:0000559,2.47e-18,59;CL:0000860,1.31e-17,42;CL:0002057,1.31e-17,42;CL:0000048,1.24e-10,427;CL:0000723,1.48e-10,433;CL:0000034,1.62e-09,441;CL:0002320,4.08e-09,361;CL:0000134,1.12e-08,354 | |||
|ontology_enrichment_development_v019=CL:0002057;4.71e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.13e-20!167;UBERON:0002390!8.72e-19!102;UBERON:0003061!8.72e-19!102;UBERON:0002371!8.79e-18!80;UBERON:0004765!9.01e-18!101;UBERON:0001434!9.01e-18!101;UBERON:0002193!1.39e-15!112;UBERON:0001474!9.52e-15!86;UBERON:0002405!4.11e-11!115;UBERON:0003081!1.65e-10!216;UBERON:0002384!1.60e-08!375;UBERON:0000914!2.89e-07!83;UBERON:0002329!2.89e-07!83;UBERON:0003077!2.89e-07!83;UBERON:0003059!2.89e-07!83;UBERON:0007282!2.89e-07!83;UBERON:0009618!2.89e-07!83;UBERON:0007285!2.89e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.42e-22,167;UBERON:0002390,2.30e-19,98;UBERON:0003061,2.30e-19,98;UBERON:0001434,4.70e-19,100;UBERON:0002371,1.65e-18,76;UBERON:0004765,1.13e-17,90;UBERON:0002193,5.33e-16,108;UBERON:0001474,2.74e-15,82;UBERON:0002405,7.68e-13,93;UBERON:0000926,2.61e-12,315;UBERON:0004120,2.61e-12,315;UBERON:0006603,2.61e-12,315;UBERON:0003081,9.76e-12,203;UBERON:0002384,7.38e-09,371 | |||
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| ||
|short_description=p1@ACSL4 | |||
}} | }} |
Latest revision as of 00:37, 19 September 2015
Short description: | p1@ACSL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACSL4_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000469857_5end |
EntrezGene: | ACSL4 |
HGNC: | 3571 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.24e-23 | 72 |
granulocyte monocyte progenitor cell | 8.20e-21 | 67 |
myeloid lineage restricted progenitor cell | 4.16e-20 | 66 |
defensive cell | 2.28e-19 | 48 |
phagocyte | 2.28e-19 | 48 |
myeloid cell | 3.34e-19 | 108 |
common myeloid progenitor | 3.34e-19 | 108 |
macrophage dendritic cell progenitor | 9.09e-19 | 61 |
monopoietic cell | 2.47e-18 | 59 |
monocyte | 2.47e-18 | 59 |
monoblast | 2.47e-18 | 59 |
promonocyte | 2.47e-18 | 59 |
classical monocyte | 1.31e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.31e-17 | 42 |
multi fate stem cell | 1.24e-10 | 427 |
somatic stem cell | 1.48e-10 | 433 |
stem cell | 1.62e-09 | 441 |
connective tissue cell | 4.08e-09 | 361 |
mesenchymal cell | 1.12e-08 | 354 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.42e-22 | 167 |
hematopoietic system | 2.30e-19 | 98 |
blood island | 2.30e-19 | 98 |
skeletal system | 4.70e-19 | 100 |
bone marrow | 1.65e-18 | 76 |
skeletal element | 1.13e-17 | 90 |
hemolymphoid system | 5.33e-16 | 108 |
bone element | 2.74e-15 | 82 |
immune system | 7.68e-13 | 93 |
mesoderm | 2.61e-12 | 315 |
mesoderm-derived structure | 2.61e-12 | 315 |
presumptive mesoderm | 2.61e-12 | 315 |
lateral plate mesoderm | 9.76e-12 | 203 |
connective tissue | 7.38e-09 | 371 |