FFCP PHASE1:Hg19::chr9:90341260..90341289,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:90341260..90341289,+ to FFCP PHASE1:Hg19::chr9:90341260..90341289,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1514 | |EntrezGene=1514 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2537 | |HGNC=2537 | ||
|TSSclassifier=strong | |||
|UniProt=P07711 | |UniProt=P07711 | ||
|association_with_transcript=286bp_to_NM_001912,uc004aph.2_5end | |||
|cluster_id=chr9:90341260..90341289,+ | |||
|description=CAGE_peak_5_at_CTSL1_5end | |||
|id=chr9:90341260..90341289,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.62e-13!42;CL:0000860!1.05e-11!45;CL:0002194!3.55e-11!63;CL:0000576!3.55e-11!63;CL:0000040!3.55e-11!63;CL:0000559!3.55e-11!63;CL:0002009!2.44e-10!65;CL:0000839!1.37e-09!70;CL:0000557!3.12e-09!71;CL:0000766!4.84e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.84e-32;39!CL:0000234;1.84e-32;39!CL:0000860;1.32e-28;33!CL:0002057;1.32e-28;33!CL:0000576;2.33e-14;48!CL:0000766;3.93e-11;69!CL:0000235;6.07e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.55e-33,48;CL:0000234,9.55e-33,48;CL:0000860,4.68e-25,42;CL:0002057,4.68e-25,42;CL:0002194,4.86e-25,59;CL:0000576,4.86e-25,59;CL:0000040,4.86e-25,59;CL:0000559,4.86e-25,59;CL:0002009,4.78e-24,61;CL:0000839,7.96e-22,66;CL:0000557,2.02e-21,67;CL:0000766,1.45e-19,72;CL:0000763,2.74e-11,108;CL:0000049,2.74e-11,108;CL:0002087,2.75e-10,115;CL:0000235,4.79e-10,6;CL:0002031,1.20e-09,120;CL:0000134,6.34e-08,354;CL:0000738,6.35e-08,136;CL:0002320,1.35e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!5.53e-10!448;UBERON:0004120!5.53e-10!448;UBERON:0006603!5.53e-10!448;UBERON:0000467!3.16e-09!625;UBERON:0000062!4.03e-09!511;UBERON:0000480!4.31e-09!626;UBERON:0002371!5.08e-09!80;UBERON:0002204!1.12e-08!167;UBERON:0000468!1.82e-08!659;UBERON:0001474!4.12e-08!86;UBERON:0004765!9.96e-08!101;UBERON:0001434!9.96e-08!101;UBERON:0002405!2.28e-07!115;UBERON:0000923!6.63e-07!604;UBERON:0005291!6.63e-07!604;UBERON:0006598!6.63e-07!604;UBERON:0002532!6.63e-07!604;UBERON:0000922!7.18e-07!612;UBERON:0002050!8.63e-07!605;UBERON:0005423!8.63e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.99e-20,76;UBERON:0001474,2.32e-18,82;UBERON:0004765,6.27e-18,90;UBERON:0001434,3.84e-17,100;UBERON:0002405,1.58e-15,93;UBERON:0002390,1.88e-14,98;UBERON:0003061,1.88e-14,98;UBERON:0002193,1.33e-12,108;UBERON:0002204,1.06e-11,167;UBERON:0000926,1.02e-08,315;UBERON:0004120,1.02e-08,315;UBERON:0006603,1.02e-08,315;UBERON:0003081,1.56e-07,203;UBERON:0002384,3.78e-07,371 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,1.0007329835313,0,0,0,0,1.04474251279935,0.245733936501509,0,0,0,0,0,2.01697543935533,0,0,0.975865597581014,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0,0,0,0.581592955118259,0.755751887377619,0.485168122375632,1.39457422143411,1.6446715520873,1.85823822537062,3.74000110018796,3.07392847834921,4.25668013799453,1.72372840368309,0.645484683583826,0,1.69418105588344,2.18324920046277,0.674170453335254,0.918251677112708,0.962787081228281,1.91801137739712,1.9791078011203,0.997318288108159,1.27867425159808,2.32167390902867,0.56738522469114,1.24564449799115,3.76872997885115,4.69334626578181,3.04064382587163,0.605399502633369,0.368277635987565,1.89877432464531,0.211255286311942,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.722878304769133,1.00267582127178,1.15877215168659,0,0.486634870302636,0.283604451492204,0.443458794925128,0,1.11332214173056,0,0.370784442784429,0.649094787309367,0.348259474598534,0.930705723632056,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0.860509862246441,0.354668382198357,1.68203280042692,0,0.74000264525148,0.311211035399766,0.134710672069688,0.653847612453835,0.151357427644931,0.576175924479999,0,1.5608003841516,0,0.597794722207204,0,0.323745888736263,0,0.816616685019573,0,0.206651562351531,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0.226864366320042,0.358779271377724,0.427114777637135,0.211931901159562,0,0,0,0.37223371266318,0,0.0974370051611986,0.504867548488229,0,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0,0.772057809126758,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0,0,0,0,0.301586917234893,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,1.72351904261178,0.468008530278475,1.63494278517601,1.87467667973554,0.335964256397719,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0.207328115540772,0.288239906833923,0,0.380987365753014,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0.224262168690721,0,0.07333828582095,0.258543431515556,0,0,0.797814349754612,1.04007436911366,0,0,0.532844358032199,0.142977993658148,0,0,0.977208552881205,0.355391948742546,0,0.301439377059586,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0.479249710983165,0,0,0.723906533337896,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0.473107245101804,0.234282829985426,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.581051892299796,0.120859449591622,0.200506470303285,0.0920809889358963,0.459257792658427,0.546273504020151,1.04899531967539,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0.831076008928724,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0.616194468458578,0,0.275673144969061,0.214840489736547,0,0.255679882248303,0.356128142586949,0.165284915360978,0.384380134730212,0.127612712494584,0.30347334256665,0.464845549297286,0.31481234683064,0.6970372701606,0,0.532306030317022,0,0,0.143124886741991,0.744316738719335,0.632758849437452,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0.282810863907425,0,0,0,1.31535265576129,0,0,0,0,0.563391205064483,0.143411352204052,0.0982490410131212,0,0.354761064070598,1.89996871767898,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0.307160702099232,0,0.281338832821026,0.111308705022906,0.329607748453519,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.361789315876224,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,0.359030577639089,0,0.638002319463839,0.183195186803725,1.06606955203727,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.687944129886466,0,0,0.0821154570532092,0.193978032976839,0,0.225980740780532,0.137041924646751,0,0,0,0.0801588202515337,0,0.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| 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| ||
|short_description=p5@CTSL1 | |||
}} | }} |
Latest revision as of 03:39, 18 September 2015
Short description: | p5@CTSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CTSL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 286bp_to_NM_001912, uc004aph.2_5end |
EntrezGene: | CTSL1 |
HGNC: | 2537 |
UniProt: | P07711 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.55e-33 | 48 |
phagocyte | 9.55e-33 | 48 |
classical monocyte | 4.68e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.68e-25 | 42 |
monopoietic cell | 4.86e-25 | 59 |
monocyte | 4.86e-25 | 59 |
monoblast | 4.86e-25 | 59 |
promonocyte | 4.86e-25 | 59 |
macrophage dendritic cell progenitor | 4.78e-24 | 61 |
myeloid lineage restricted progenitor cell | 7.96e-22 | 66 |
granulocyte monocyte progenitor cell | 2.02e-21 | 67 |
myeloid leukocyte | 1.45e-19 | 72 |
myeloid cell | 2.74e-11 | 108 |
common myeloid progenitor | 2.74e-11 | 108 |
nongranular leukocyte | 2.75e-10 | 115 |
macrophage | 4.79e-10 | 6 |
hematopoietic lineage restricted progenitor cell | 1.20e-09 | 120 |
mesenchymal cell | 6.34e-08 | 354 |
leukocyte | 6.35e-08 | 136 |
connective tissue cell | 1.35e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.99e-20 | 76 |
bone element | 2.32e-18 | 82 |
skeletal element | 6.27e-18 | 90 |
skeletal system | 3.84e-17 | 100 |
immune system | 1.58e-15 | 93 |
hematopoietic system | 1.88e-14 | 98 |
blood island | 1.88e-14 | 98 |
hemolymphoid system | 1.33e-12 | 108 |
musculoskeletal system | 1.06e-11 | 167 |
mesoderm | 1.02e-08 | 315 |
mesoderm-derived structure | 1.02e-08 | 315 |
presumptive mesoderm | 1.02e-08 | 315 |
lateral plate mesoderm | 1.56e-07 | 203 |
connective tissue | 3.78e-07 | 371 |