FFCP PHASE1:Hg19::chr9:88969287..88969297,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:88969287..88969297,- to FFCP PHASE1:Hg19::chr9:88969287..88969297,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79670 | |EntrezGene=79670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25817 | |HGNC=25817 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_ENST00000277141_5end | |||
|cluster_id=chr9:88969287..88969297,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_ZCCHC6_5end | |||
|id=chr9:88969287..88969297,- | |||
|ontology_enrichment_celltype=CL:0002057!1.80e-27!42;CL:0000860!1.95e-24!45;CL:0000738!1.26e-22!140;CL:0000766!4.31e-22!76;CL:0002087!1.44e-19!119;CL:0002031!2.91e-19!124;CL:0002009!5.03e-19!65;CL:0000839!3.19e-18!70;CL:0002194!3.81e-18!63;CL:0000576!3.81e-18!63;CL:0000040!3.81e-18!63;CL:0000559!3.81e-18!63;CL:0000557!1.39e-17!71;CL:0000037!2.33e-15!172;CL:0000566!2.33e-15!172;CL:0002032!1.05e-14!165;CL:0000837!1.05e-14!165;CL:0000988!6.28e-13!182;CL:0000134!9.23e-13!358;CL:0000763!3.56e-12!112;CL:0000049!3.56e-12!112;CL:0002320!4.26e-12!365;CL:0000219!2.57e-10!390;CL:0000048!3.68e-10!430;CL:0000723!9.98e-10!436;CL:0000034!2.00e-09!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.91e-40;33!CL:0002057;9.91e-40;33!CL:0000576;6.64e-34;48!CL:0000473;2.07e-28;39!CL:0000234;2.07e-28;39!CL:0000766;2.60e-23;69!CL:0002087;1.03e-12;104!CL:0000094;1.23e-11;8!CL:0000763;6.44e-10;100!CL:0000738;6.55e-09;136!CL:0002393;6.29e-08;6!CL:0002397;6.29e-08;6!CL:0000081;7.31e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.10e-53,42;CL:0002057,1.10e-53,42;CL:0000766,5.34e-48,72;CL:0000473,3.61e-47,48;CL:0000234,3.61e-47,48;CL:0002009,1.62e-42,61;CL:0002194,1.12e-40,59;CL:0000576,1.12e-40,59;CL:0000040,1.12e-40,59;CL:0000559,1.12e-40,59;CL:0000839,8.81e-40,66;CL:0000557,3.19e-39,67;CL:0000738,3.40e-38,136;CL:0002031,2.44e-32,120;CL:0002087,2.51e-32,115;CL:0000763,6.67e-30,108;CL:0000049,6.67e-30,108;CL:0000037,6.89e-28,168;CL:0002032,5.52e-27,161;CL:0000837,5.52e-27,161;CL:0000988,3.42e-25,177;CL:0000134,1.50e-15,354;CL:0002320,1.15e-14,361;CL:0000048,1.02e-11,427;CL:0000219,1.31e-11,386;CL:0000094,1.34e-11,8;CL:0002393,2.55e-11,9;CL:0002397,2.55e-11,9;CL:0000723,3.94e-11,433;CL:0000034,7.70e-11,441;CL:0000081,7.76e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.94e-38;42!CL:0000049;3.24e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.69e-22!102;UBERON:0003061!4.69e-22!102;UBERON:0002193!6.28e-19!112;UBERON:0002371!7.52e-16!80;UBERON:0001474!2.85e-14!86;UBERON:0004765!1.64e-12!101;UBERON:0001434!1.64e-12!101;UBERON:0002384!6.12e-12!375;UBERON:0002405!1.37e-11!115;UBERON:0002204!8.61e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.04e-10;15!UBERON:0000179;4.04e-10;15!UBERON:0000463;4.04e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.21e-43,98;UBERON:0003061,3.21e-43,98;UBERON:0002193,4.25e-37,108;UBERON:0002371,9.37e-37,76;UBERON:0001474,3.28e-34,82;UBERON:0004765,1.66e-29,90;UBERON:0002405,6.57e-28,93;UBERON:0001434,1.00e-24,100;UBERON:0003081,1.95e-17,203;UBERON:0002384,6.06e-14,371;UBERON:0002204,3.50e-13,167;UBERON:0000926,4.34e-11,315;UBERON:0004120,4.34e-11,315;UBERON:0006603,4.34e-11,315;UBERON:0000178,1.77e-10,15;UBERON:0000179,1.77e-10,15;UBERON:0000463,1.77e-10,15 | |||
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| ||
|short_description=p3@ZCCHC6 | |||
}} | }} |
Latest revision as of 02:39, 18 September 2015
Short description: | p3@ZCCHC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZCCHC6_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 27bp_to_ENST00000277141_5end |
EntrezGene: | ZCCHC6 |
HGNC: | 25817 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.21e-43 | 98 |
blood island | 3.21e-43 | 98 |
hemolymphoid system | 4.25e-37 | 108 |
bone marrow | 9.37e-37 | 76 |
bone element | 3.28e-34 | 82 |
skeletal element | 1.66e-29 | 90 |
immune system | 6.57e-28 | 93 |
skeletal system | 1.00e-24 | 100 |
lateral plate mesoderm | 1.95e-17 | 203 |
connective tissue | 6.06e-14 | 371 |
musculoskeletal system | 3.50e-13 | 167 |
mesoderm | 4.34e-11 | 315 |
mesoderm-derived structure | 4.34e-11 | 315 |
presumptive mesoderm | 4.34e-11 | 315 |
blood | 1.77e-10 | 15 |
haemolymphatic fluid | 1.77e-10 | 15 |
organism substance | 1.77e-10 | 15 |