FFCP PHASE1:Hg19::chr9:75766763..75766789,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:75766763..75766789,+ to FFCP PHASE1:Hg19::chr9:75766763..75766789,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=301 | |EntrezGene=301 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=533 | |HGNC=533 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T3N1,P04083,Q5TZZ9 | |UniProt=Q5T3N1,P04083,Q5TZZ9 | ||
|association_with_transcript=0bp_to_ENST00000456643,ENST00000468639,NM_000700,uc004aje.1,uc004ajf.1_5end | |||
|cluster_id=chr9:75766763..75766789,+ | |||
|description=CAGE_peak_1_at_ANXA1_5end | |||
|id=chr9:75766763..75766789,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.21e-21!42;CL:0000860!1.34e-20!45;CL:0000557!3.26e-19!71;CL:0000766!4.94e-19!76;CL:0000839!1.56e-17!70;CL:0002009!8.33e-17!65;CL:0000012!4.22e-16!682;CL:0002194!4.77e-16!63;CL:0000576!4.77e-16!63;CL:0000040!4.77e-16!63;CL:0000559!4.77e-16!63;CL:0000548!1.81e-15!679;CL:0000004!1.81e-15!679;CL:0000255!1.81e-15!679;CL:0002371!1.14e-14!591;CL:0000144!3.27e-14!625;CL:0000063!4.42e-14!578;CL:0000003!1.00e-12!722;CL:0000723!3.18e-12!436;CL:0000048!3.91e-12!430;CL:0000034!1.77e-11!444;CL:0000134!9.53e-10!358;CL:0002320!3.02e-09!365;CL:0000763!7.63e-09!112;CL:0000049!7.63e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.01e-18;33!CL:0002057;1.01e-18;33!CL:0000473;2.54e-14;39!CL:0000234;2.54e-14;39!CL:0000576;5.81e-12;48!CL:0000766;1.09e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.19e-21,42;CL:0002057,5.19e-21,42;CL:0000473,2.02e-19,48;CL:0000234,2.02e-19,48;CL:0000557,2.68e-19,67;CL:0000766,4.52e-19,72;CL:0000839,1.41e-17,66;CL:0002009,7.14e-17,61;CL:0002194,4.15e-16,59;CL:0000576,4.15e-16,59;CL:0000040,4.15e-16,59;CL:0000559,4.15e-16,59;CL:0000723,3.43e-12,433;CL:0000048,4.13e-12,427;CL:0000034,1.92e-11,441;CL:0000134,9.53e-10,354;CL:0002320,3.04e-09,361;CL:0000763,1.23e-08,108;CL:0000049,1.23e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.69e-19!80;UBERON:0004765!1.17e-17!101;UBERON:0001434!1.17e-17!101;UBERON:0001474!4.11e-17!86;UBERON:0002204!6.73e-17!167;UBERON:0002390!1.22e-12!102;UBERON:0003061!1.22e-12!102;UBERON:0002193!1.68e-12!112;UBERON:0000926!3.43e-10!448;UBERON:0004120!3.43e-10!448;UBERON:0006603!3.43e-10!448;UBERON:0003081!1.31e-09!216;UBERON:0002405!4.38e-09!115;UBERON:0002384!4.88e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.58e-19,76;UBERON:0004765,7.32e-18,90;UBERON:0001474,4.65e-17,82;UBERON:0001434,5.70e-17,100;UBERON:0002204,2.87e-16,167;UBERON:0002405,5.44e-15,93;UBERON:0000926,2.38e-13,315;UBERON:0004120,2.38e-13,315;UBERON:0006603,2.38e-13,315;UBERON:0002390,1.81e-12,98;UBERON:0003061,1.81e-12,98;UBERON:0002193,2.60e-12,108;UBERON:0003081,4.17e-11,203;UBERON:0002384,4.96e-09,371 | |||
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| ||
|short_description=p1@ANXA1 | |||
}} | }} |
Latest revision as of 20:30, 17 September 2015
Short description: | p1@ANXA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ANXA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000456643, ENST00000468639, NM_000700, uc004aje.1, uc004ajf.1_5end |
EntrezGene: | ANXA1 |
HGNC: | 533 |
UniProt: | Q5T3N1P04083Q5TZZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.19e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.19e-21 | 42 |
defensive cell | 2.02e-19 | 48 |
phagocyte | 2.02e-19 | 48 |
granulocyte monocyte progenitor cell | 2.68e-19 | 67 |
myeloid leukocyte | 4.52e-19 | 72 |
myeloid lineage restricted progenitor cell | 1.41e-17 | 66 |
macrophage dendritic cell progenitor | 7.14e-17 | 61 |
monopoietic cell | 4.15e-16 | 59 |
monocyte | 4.15e-16 | 59 |
monoblast | 4.15e-16 | 59 |
promonocyte | 4.15e-16 | 59 |
somatic stem cell | 3.43e-12 | 433 |
multi fate stem cell | 4.13e-12 | 427 |
stem cell | 1.92e-11 | 441 |
mesenchymal cell | 9.53e-10 | 354 |
connective tissue cell | 3.04e-09 | 361 |
myeloid cell | 1.23e-08 | 108 |
common myeloid progenitor | 1.23e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.58e-19 | 76 |
skeletal element | 7.32e-18 | 90 |
bone element | 4.65e-17 | 82 |
skeletal system | 5.70e-17 | 100 |
musculoskeletal system | 2.87e-16 | 167 |
immune system | 5.44e-15 | 93 |
mesoderm | 2.38e-13 | 315 |
mesoderm-derived structure | 2.38e-13 | 315 |
presumptive mesoderm | 2.38e-13 | 315 |
hematopoietic system | 1.81e-12 | 98 |
blood island | 1.81e-12 | 98 |
hemolymphoid system | 2.60e-12 | 108 |
lateral plate mesoderm | 4.17e-11 | 203 |
connective tissue | 4.96e-09 | 371 |