FFCP PHASE1:Hg19::chr9:72658859..72658870,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:72658859..72658870,+ to FFCP PHASE1:Hg19::chr9:72658859..72658870,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=256691 | |EntrezGene=256691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23673 | |HGNC=23673 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z304 | |UniProt=Q7Z304 | ||
|association_with_transcript=362bp_to_ENST00000377182,NM_153267,uc004ahm.2,uc004ahn.2_5end | |||
|cluster_id=chr9:72658859..72658870,+ | |||
|coexpression_cluster_id=C1551 | |||
|description=CAGE_peak_6_at_MAMDC2_5end | |||
|id=chr9:72658859..72658870,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;8.92e-07;4!CL:0002222;8.92e-07;4!CL:0002224;8.92e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,8.78e-07,4;CL:0002222,8.78e-07,4;CL:0002224,8.78e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!4.23e-11!347;UBERON:0000468!2.52e-10!659;UBERON:0000922!3.11e-09!612;UBERON:0002050!4.42e-09!605;UBERON:0005423!4.42e-09!605;UBERON:0000467!7.87e-09!625;UBERON:0000923!9.66e-09!604;UBERON:0005291!9.66e-09!604;UBERON:0006598!9.66e-09!604;UBERON:0002532!9.66e-09!604;UBERON:0000480!1.08e-08!626;UBERON:0000477!2.89e-08!286;UBERON:0000063!4.47e-08!97;UBERON:0000064!2.58e-07!219;UBERON:0003886!5.71e-07!63;UBERON:0000464!7.69e-07!104;UBERON:0001048!8.70e-07!168;UBERON:0000119!9.06e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;8.92e-07;4!UBERON:0005389;8.92e-07;4!UBERON:0000484;8.92e-07;4!UBERON:0000965;8.92e-07;4!UBERON:0001803;8.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000076,5.70e-09,8;UBERON:0010077,8.78e-07,4;UBERON:0005389,8.78e-07,4;UBERON:0000484,8.78e-07,4;UBERON:0002546,8.78e-07,4;UBERON:0000965,8.78e-07,4;UBERON:0001803,8.78e-07,4;UBERON:0003073,8.78e-07,4;UBERON:0005426,8.78e-07,4 | |||
|phase1_expression=4.54195948176392,0.428201047781966,6.62485699251064,4.00293193412522,7.15137751083661,3.48935409640147,0,0,0.522371256399677,0,0,0.436882744260345,1.31883489114227,0,0,2.6893005858071,0.602694528023977,0.730310090387373,1.95173119516203,0.492484232307152,0.408001382488506,0,1.14494394852423,1.09499540058307,2.13422487311165,0,0,0,0,0.383829398097213,0,0,0.6024118375565,0.369754010166788,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,5.5670016293577,0,1.03988298880475,1.77383517970051,0.966182642624386,1.0478326039817,0.364295288292542,0.741568885568859,0,0,0,0,0,0,1.19257444420023,1.72046919021225,2.08284300964557,1.13061588384802,0.838998872419812,0.550236083880135,1.25396979922086,0,0,0,2.01414658554573,0,0.976248230192678,0.735326160691737,1.62028389576352,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0.436094052142534,0,0,0.397227542439656,1.43418310374407,0,1.12135520028461,0,0,0.311211035399766,0.269421344139376,0.326923806226917,0.302714855289863,0.576175924479999,0.234321431833797,0.936480230490962,0,0.149448680551801,0.117434498643765,0,0,0.61246251376468,0,0.826606249406124,0,0.741800787835671,0.910161361938026,0,0.505008341862199,0,0.831192346452549,0,0.612975591598039,0.150238058906597,0.113432183160021,0.358779271377724,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0,0,0.184099797284599,0.323292113637624,0.355009592516614,0,0,1.93260853163297,1.36373060295417,0.860413786167011,0,0.530119073285941,0.116193942869518,0,0,0,0,0,0,0,0,0.828147600278907,0.505754070234305,0.241011029883482,0.330881918197182,0.435758888184812,0.237270619111097,0.404493924480493,0.588664395376038,0.38474715694639,0.738155454624648,0,2.057870056657,2.94017422771084,0,0,0,0,0,1.02940686179115,0.109750285408626,0,0,0.370353780634118,0.325808305310325,0,2.88662684050547,3.70977295920246,3.28744343860301,0.721832238805369,0,0.190254152234598,0,0,0,0,0,1.87467667973554,2.18376766658517,1.55952606966625,2.32852159027406,1.45316969256981,2.68367875415648,0,0,0.207328115540772,0.576479813667846,1.2624243342638,0,0,0,0,0,0,0,0.224262168690721,1.30788020649984,0.22001485746285,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,1.0656887160644,2.43062589218851,3.25572963234866,0.823240336780769,0,4.97548728239564,0,0,0,0,0,0,0,0,0,1.42636905040718,0.434343920002738,1.2328579353023,1.07436577943937,0,0,0.215627574859517,0,5.08189248444927,2.60279707715243,0,0.502548796003046,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,1.24782516918484,0.535286966391485,0.473107245101804,1.17141414992713,0,0,1.03473071292505,0.664225598535437,0,2.34585759063824,0.391602314925481,0,0,0,0,0,0,0,0,0.153461973288062,0.841980283299221,1.28139149255701,0,0.482561763430822,4.45254199334973,0.154209693802656,0.177561725313127,0.164254312027618,0.519254429183621,0,0,0.40101294060657,0,0,0,0,1.80479845162965,0.385076685522074,0.784349769176855,1.46139224653261,1.37217117560738,0,0,2.37507507712353,0,1.08378575017541,0,2.03901018436031,1.66215201785745,0.895499018888713,0,0,0.256450125116389,0.656029291399411,0.650756789328606,1.44257416306811,0,0,0,0,1.6068392984416,1.25671933779759,0,0.307007349452259,0.275673144969061,0.107420244868274,0,0.340906509664404,2.04773681987496,0.330569830721956,0.768760269460425,0.893288987462089,0.10115778085555,0,0,0,0,0,0.869932992075073,0.55597265731176,0.286249773483982,0.744316738719335,0,0.762520775695299,0.767693373934002,0,0,0.78494864019923,0.359744915166629,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0.430234056612155,0.294747123039363,0,0.354761064070598,0.211107635297664,0,0,0,0.673554789078584,0,2.17781969722645,1.50630081242847,0.43050537267123,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0.284136146806413,0.23874448473769,0,0.307160702099232,0,0,0.779160935160341,0,0,0.597743964753209,0.276283915531148,0,0.511343412510774,0,0.311039587661807,0.629078458031288,0,0,2.56472854656027,0,0,0,0.185536196323703,0,0,0,2.17499872630438,0,1.5255219017566,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,2.46240827212151,0,0.46112780877612,0,0,0.957003479195758,0.274792780205587,0,0,0,0,0,0,0,0,0,1.26598838716816,0,0,0,4.97630965539252,1.85760885457012,1.83309043480088,0,0.123563938946503,0,0,4.01288823649394,0.234264445725339,0,0,0,1.97292201424695,3.62972148145992,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,4.54289337429278,17.8865473770481,0,0,0,2.71569246167574,0,0.225980740780532,0,0,0,0,1.84365286578528,2.77488893161158,12.3881957940921,0,1.83258553865465,1.88754497648161,0,0.124252535565433,0.235694034616795,0.407712618220842,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| 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| ||
|short_description=p6@MAMDC2 | |||
}} | }} |
Latest revision as of 17:36, 17 September 2015
Short description: | p6@MAMDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MAMDC2_5end |
Coexpression cluster: | C1551_epithelioid_gastric_Adipocyte_smooth_pineal_stomach_mesothelioma |
Association with transcript: | 362bp_to_ENST00000377182, NM_153267, uc004ahm.2, uc004ahn.2_5end |
EntrezGene: | MAMDC2 |
HGNC: | 23673 |
UniProt: | Q7Z304 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 8.78e-07 | 4 |
vertebrate lens cell | 8.78e-07 | 4 |
lens epithelial cell | 8.78e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
external ectoderm | 5.70e-09 | 8 |
cuboidal epithelium | 8.78e-07 | 4 |
transparent eye structure | 8.78e-07 | 4 |
simple cuboidal epithelium | 8.78e-07 | 4 |
cranial placode | 8.78e-07 | 4 |
lens of camera-type eye | 8.78e-07 | 4 |
epithelium of lens | 8.78e-07 | 4 |
lens placode | 8.78e-07 | 4 |
lens vesicle | 8.78e-07 | 4 |