FFCP PHASE1:Hg19::chr9:4300050..4300118,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:4300050..4300118,- to FFCP PHASE1:Hg19::chr9:4300050..4300118,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=169792 | |EntrezGene=169792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28510 | |HGNC=28510 | ||
|TSSclassifier=strong | |||
|UniProt=Q1PHJ8,Q8NEA6 | |UniProt=Q1PHJ8,Q8NEA6 | ||
|association_with_transcript=-15bp_to_NM_001042413,uc003zhx.1,uc003zif.1,uc003zig.1,uc003zih.1,uc003zii.1_5end | |||
|cluster_id=chr9:4300050..4300118,- | |||
|coexpression_cluster_id=C2945 | |||
|description=CAGE_peak_1_at_GLIS3_5end | |||
|id=chr9:4300050..4300118,- | |||
|ontology_enrichment_celltype=CL:0000055!2.07e-14!180;CL:0000183!3.27e-08!59;CL:0000187!5.50e-08!54;CL:0000680!6.08e-08!57;CL:0000056!6.08e-08!57;CL:0000355!6.08e-08!57;CL:0000393!1.58e-07!60;CL:0000211!1.58e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.27e-07;33!CL:0002057;4.27e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.49e-08,55;CL:0000680,1.68e-08,58;CL:0000056,1.68e-08,58;CL:0000355,1.68e-08,58;CL:0000393,1.00e-07,61;CL:0000211,1.00e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.73e-22!659;UBERON:0000467!1.10e-20!625;UBERON:0000475!1.84e-20!365;UBERON:0000480!2.45e-20!626;UBERON:0000062!3.15e-19!511;UBERON:0002050!7.16e-19!605;UBERON:0005423!7.16e-19!605;UBERON:0000922!1.05e-18!612;UBERON:0000025!1.26e-18!194;UBERON:0000923!1.64e-18!604;UBERON:0005291!1.64e-18!604;UBERON:0006598!1.64e-18!604;UBERON:0002532!1.64e-18!604;UBERON:0000481!3.59e-18!347;UBERON:0004111!2.87e-17!241;UBERON:0000477!5.44e-17!286;UBERON:0001017!1.65e-16!82;UBERON:0005743!2.38e-16!86;UBERON:0000119!3.49e-16!312;UBERON:0000483!6.14e-16!309;UBERON:0000955!1.99e-15!69;UBERON:0006238!1.99e-15!69;UBERON:0001049!4.00e-15!57;UBERON:0005068!4.00e-15!57;UBERON:0006241!4.00e-15!57;UBERON:0007135!4.00e-15!57;UBERON:0002616!1.11e-14!59;UBERON:0003075!2.75e-14!86;UBERON:0007284!2.75e-14!86;UBERON:0000073!2.36e-13!94;UBERON:0001016!2.36e-13!94;UBERON:0002346!2.14e-12!90;UBERON:0005256!3.12e-12!143;UBERON:0002100!1.54e-10!216;UBERON:0002780!4.16e-10!41;UBERON:0001890!4.16e-10!41;UBERON:0006240!4.16e-10!41;UBERON:0003080!5.77e-10!42;UBERON:0003056!8.46e-10!61;UBERON:0000033!1.24e-09!123;UBERON:0002020!2.65e-09!34;UBERON:0003528!2.65e-09!34;UBERON:0002791!7.46e-09!33;UBERON:0001893!1.19e-08!34;UBERON:0000153!1.20e-08!129;UBERON:0007811!1.20e-08!129;UBERON:0000058!1.33e-08!26;UBERON:0003914!3.32e-08!118;UBERON:0007023!3.96e-08!115;UBERON:0001869!8.77e-08!32;UBERON:0000489!9.68e-08!32;UBERON:0004121!2.01e-07!169;UBERON:0003103!3.19e-07!69;UBERON:0000926!3.52e-07!448;UBERON:0004120!3.52e-07!448;UBERON:0006603!3.52e-07!448;UBERON:0000064!4.79e-07!219;UBERON:0001134!6.01e-07!61;UBERON:0002036!6.01e-07!61;UBERON:0003082!6.01e-07!61;UBERON:0004290!6.52e-07!70;UBERON:0002385!7.93e-07!63;UBERON:0001015!7.93e-07!63;UBERON:0000383!7.93e-07!63;UBERON:0003076!9.98e-07!15;UBERON:0003057!9.98e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.26e-08;53!UBERON:0002616;1.26e-08;53!UBERON:0003528;2.08e-08;34!UBERON:0002020;2.08e-08;34!UBERON:0002780;3.86e-08;41!UBERON:0001890;3.86e-08;41!UBERON:0002791;4.66e-08;32!UBERON:0001893;1.32e-07;34!UBERON:0001869;1.44e-07;32!UBERON:0001017;1.58e-07;75!UBERON:0000955;2.63e-07;68!UBERON:0000489;6.23e-07;29 | |||
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| ||
|short_description=p1@GLIS3 | |||
}} | }} |
Latest revision as of 12:23, 17 September 2015
Short description: | p1@GLIS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLIS3_5end |
Coexpression cluster: | C2945_seminal_extraskeletal_leiomyoblastoma_thyroid_spinal_serous_ductus |
Association with transcript: | -15bp_to_NM_001042413, uc003zhx.1, uc003zif.1, uc003zig.1, uc003zih.1, uc003zii.1_5end |
EntrezGene: | GLIS3 |
HGNC: | 28510 |
UniProt: | Q1PHJ8Q8NEA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.49e-08 | 55 |
muscle precursor cell | 1.68e-08 | 58 |
myoblast | 1.68e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.68e-08 | 58 |
electrically responsive cell | 1.00e-07 | 61 |
electrically active cell | 1.00e-07 | 61 |