FFCP PHASE1:Hg19::chr9:35685631..35685657,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:35685631..35685657,+ to FFCP PHASE1:Hg19::chr9:35685631..35685657,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:35685631..35685657,+ | |||
|coexpression_cluster_id=C638 | |||
|description=CAGE_peak_at_chr9:35685631..35685657,+ | |||
|id=chr9:35685631..35685657,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.45e-36!180;CL:0000680!1.61e-25!57;CL:0000056!1.61e-25!57;CL:0000355!1.61e-25!57;CL:0000187!1.12e-24!54;CL:0000183!1.87e-24!59;CL:0000393!3.26e-23!60;CL:0000211!3.26e-23!60;CL:0000192!9.49e-21!42;CL:0000514!9.49e-21!42;CL:0000359!1.17e-17!32;CL:0000222!2.31e-16!119;CL:0000057!1.36e-13!75;CL:0000220!8.68e-10!246;CL:0002321!8.97e-10!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.44e-20;32!CL:0000192;2.96e-19;43!CL:0000187;1.15e-17;55!CL:0000393;1.25e-14;61!CL:0000211;1.25e-14;61!CL:0002539;2.89e-07;10!CL:0000134;6.95e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,5.37e-33,58;CL:0000056,5.37e-33,58;CL:0000355,5.37e-33,58;CL:0000187,7.20e-32,55;CL:0000393,1.07e-27,61;CL:0000211,1.07e-27,61;CL:0000192,1.24e-26,43;CL:0000514,1.24e-26,43;CL:0000359,3.85e-22,32;CL:0000222,2.68e-17,121;CL:0000057,1.44e-09,76;CL:0000048,2.31e-08,427;CL:0000723,1.03e-07,433;CL:0002539,2.94e-07,10;CL:0000034,6.69e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;2.96e-19;43!CL:0000355;2.50e-17;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.74e-32!83;UBERON:0002329!1.74e-32!83;UBERON:0003077!1.74e-32!83;UBERON:0003059!1.74e-32!83;UBERON:0007282!1.74e-32!83;UBERON:0009618!1.74e-32!83;UBERON:0007285!1.74e-32!83;UBERON:0004290!1.13e-31!70;UBERON:0002385!6.31e-29!63;UBERON:0001015!6.31e-29!63;UBERON:0000383!6.31e-29!63;UBERON:0001134!1.84e-28!61;UBERON:0002036!1.84e-28!61;UBERON:0003082!1.84e-28!61;UBERON:0000486!4.60e-28!82;UBERON:0005256!1.08e-22!143;UBERON:0003104!2.00e-19!238;UBERON:0009142!2.00e-19!238;UBERON:0002100!5.99e-18!216;UBERON:0001637!6.24e-16!42;UBERON:0003509!6.24e-16!42;UBERON:0004572!6.24e-16!42;UBERON:0000481!1.21e-14!347;UBERON:0004872!7.43e-14!84;UBERON:0001981!1.61e-13!60;UBERON:0007500!1.61e-13!60;UBERON:0004537!1.61e-13!60;UBERON:0006965!1.61e-13!60;UBERON:0000490!7.95e-13!138;UBERON:0004573!1.62e-12!33;UBERON:0004571!1.62e-12!33;UBERON:0000475!1.63e-11!365;UBERON:0002049!2.27e-11!79;UBERON:0007798!2.27e-11!79;UBERON:0000926!5.40e-11!448;UBERON:0004120!5.40e-11!448;UBERON:0006603!5.40e-11!448;UBERON:0000055!3.12e-10!69;UBERON:0003914!1.11e-09!118;UBERON:0000468!4.58e-09!659;UBERON:0001009!2.67e-08!113;UBERON:0004535!3.53e-08!110;UBERON:0003102!4.26e-08!95;UBERON:0001135!2.55e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;9.22e-17;31!UBERON:0001015;9.22e-17;31!UBERON:0000383;9.22e-17;31!UBERON:0004573;1.10e-13;33!UBERON:0004571;1.10e-13;33!UBERON:0001637;3.42e-12;42!UBERON:0003509;3.42e-12;42!UBERON:0004572;3.42e-12;42!UBERON:0001134;3.43e-10;16!UBERON:0002036;3.43e-10;16!UBERON:0002204;1.35e-08;70!UBERON:0001135;1.98e-08;15!UBERON:0007500;2.47e-07;56!UBERON:0001981;2.47e-07;56!UBERON:0004537;2.47e-07;56!UBERON:0004237;2.89e-07;10!UBERON:0004695;2.89e-07;10!UBERON:0002111;2.89e-07;10!UBERON:0004178;2.89e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,2.88e-39,71;UBERON:0003059,2.88e-39,71;UBERON:0007282,2.88e-39,71;UBERON:0004290,2.88e-39,71;UBERON:0009618,2.88e-39,71;UBERON:0007524,3.42e-39,73;UBERON:0003077,2.48e-38,72;UBERON:0007285,2.48e-38,72;UBERON:0001134,7.01e-37,62;UBERON:0002036,7.01e-37,62;UBERON:0003082,7.01e-37,62;UBERON:0002385,7.76e-37,64;UBERON:0001015,7.76e-37,64;UBERON:0000383,7.76e-37,64;UBERON:0007503,1.05e-36,78;UBERON:0000486,8.40e-33,83;UBERON:0005256,4.57e-28,122;UBERON:0003104,1.56e-24,160;UBERON:0009142,1.56e-24,160;UBERON:0002100,5.87e-20,199;UBERON:0000490,1.38e-18,148;UBERON:0001637,1.54e-18,42;UBERON:0003509,1.54e-18,42;UBERON:0004572,1.54e-18,42;UBERON:0004573,1.57e-15,33;UBERON:0004571,1.57e-15,33;UBERON:0007500,1.50e-13,59;UBERON:0001981,1.50e-13,59;UBERON:0004537,1.50e-13,59;UBERON:0006965,1.50e-13,59;UBERON:0000926,5.44e-13,315;UBERON:0004120,5.44e-13,315;UBERON:0006603,5.44e-13,315;UBERON:0004872,1.33e-11,83;UBERON:0000055,1.16e-10,68;UBERON:0002204,4.15e-10,167;UBERON:0002049,4.43e-10,78;UBERON:0007798,4.43e-10,78;UBERON:0001135,1.45e-08,15;UBERON:0003914,2.41e-08,117;UBERON:0004535,2.76e-07,109;UBERON:0004237,2.94e-07,10;UBERON:0004695,2.94e-07,10;UBERON:0002111,2.94e-07,10;UBERON:0004178,2.94e-07,10;UBERON:0000947,9.96e-07,21;UBERON:0010191,9.96e-07,21 | |||
|phase1_expression=8.3572054464456,3.21150785836475,5.21531295155093,12.0087958023756,10.7270662662549,11.3404008133048,20.2639902534648,1.89515962028049,0.522371256399677,1.22866968250754,2.79120467188971,0,0.791300934685361,1.60896258848061,6.2965501388304,2.01697543935533,3.61616716814386,3.65155045193687,8.78279037822912,0.369363174230364,1.83600622119828,3.76145665773705,0.572471974262113,0.958120975510189,2.25976751270645,0,0,0,0,0,0,0,2.10844143144775,1.10926203050036,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.01210257911091,1.15076305659177,2.53007406669196,6.01605492763067,1.59331170856906,0.795285947051099,4.37971383272372,0.661743720148475,0.221729397462564,1.66886092816939,0.72038491523742,0.364295288292542,1.11235332835329,0,0,0.132957960518865,0.715471872916026,0,0,0.198762407366705,2.58070378531837,0,1.13061588384802,0.838998872419812,0.550236083880135,1.25396979922086,0,0,0,0,0.760272105718513,0,0,1.62028389576352,0.0892997282840798,0.44905874525234,0.337834441449967,0,0,0.366403487860815,0,0,0,7.9515512271251,1.39293562831038,1.72131935057184,0.573673241497627,1.77334191099179,2.80338800071154,5.33744978648525,2.71334303258876,0.311211035399766,0.942974704487816,0.817309515567294,0.302714855289863,0,0.937285727335186,3.1216007683032,3.99330275081114,2.98897361103602,0.704606991862589,1.29498355494505,0.98315564691574,0.816616685019573,1.71968044236475,0.723280468230358,0,4.45080472701402,0.910161361938026,2.87447256726495,0.336672227908132,0.750711119231785,0.277064115484183,2.19488810440419,13.1789752193578,3.45547535485173,1.81491493056034,1.61450672119976,2.98980344345994,2.54318281391474,2.40072876867522,0.412210116953756,2.31876486041066,3.16398655763703,1.5189869901714,0.876933046450788,3.28163906517349,1.56484827691909,0.646584227275248,3.55009592516614,1.30977727695932,2.03472710772585,0.193260853163297,0.272746120590835,0.573609190778008,0.365921118388786,0.132529768321485,0.232387885739037,0.207322110030741,0.504641701751257,1.45990943630332,9.38697193978896,4.5026865673502,6.90674606762403,4.64367928031979,7.21879481669586,1.30137480043828,1.18009283054671,0.723033089650446,1.65440959098591,0.653638332277218,1.66089433377768,0.943819157121151,0.98110732562673,2.30848294167834,0,1.40241773803446,0.4115740113314,10.2906097969879,0,0,0.590789906681404,0,0,0.686271241194102,0,0,0,0.277765335475589,0.325808305310325,1.03993478527958,0,0.579652024875384,1.52631302506568,0,0,0,0,0,0,0,0,0,0.839910640994298,0.425325291727159,0.268675568108545,0.290633938513962,1.53353071666084,0,0,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0.224262168690721,0.43596006883328,0.22001485746285,4.78305348303778,3.57656445851882,5.071816515336,3.72313363218819,10.4007436911366,1.80045161983499,2.83698264046557,3.46348832720929,1.14382394926518,2.71310802695722,0.823240336780769,0.977208552881205,0.355391948742546,3.16780749173372,4.22015127883421,0.871533458600294,3.69900067373611,0,0,0,2.39624855491583,4.59447743336456,2.85273810081437,3.04040744001916,2.87666851570537,1.07436577943937,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.981531933753119,0.500170521059677,4.06897535549603,21.8369404607347,9.27830741745241,11.8276811275451,7.1456263145555,5.11608369537122,2.27407504055985,1.03473071292505,0.664225598535437,16.5932251687533,1.99832313276591,0.391602314925481,2.05886054286514,0,0,0,0,0,0.604780586659361,3.2254015016441,4.45039722535381,6.73584226639377,1.15325234330131,2.55853624533352,4.82561763430822,5.93672265779964,2.46735510084249,3.19611105563629,0.98552587216571,1.03850885836724,3.60252173225874,0,0.802025881213139,0.0920809889358963,3.4444334449382,4.55227920016793,4.58935452357984,0,0.0770153371044148,0,0,0,0,0.170093705276516,1.0795795805107,0,0.541892875087706,2.00675909541941,0.509752546090077,0,1.34324852833307,0,0,1.53870075069834,0.328014645699706,0.650756789328606,0,0.732555718546747,0.330037999682352,0,0,1.6068392984416,1.16004861950546,2.00263202249038,2.91656981979646,3.30807773962873,1.39646318328756,3.0453505721988,2.81247870473133,8.01288320820636,0.165284915360978,0,0.638063562472921,0,4.64845549297286,1.25924938732256,5.5762981612848,2.7723022215848,10.6461206063404,4.34966496037536,21.4976094160547,12.7381149200372,0.372158369359667,1.89827654831236,5.3376454298671,2.04718233049067,2.1396949401696,4.13664222303718,10.20433232259,2.87795932133304,2.74537029736055,2.70968525395079,11.3222189681057,30.1169610228716,11.7952367746915,1.46290121726877,3.41198885483798,16.9040234810809,1.22849920267187,2.68670320712054,6.78048699721457,6.61638412255349,7.29782872765342,25.4301513447182,2.31510213706675,5.24715801637306,20.8997688271585,13.9420574144888,13.8030845240798,1.57752487424457,3.04572027140676,16.0501973166563,3.19284957663538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| ||
|short_description=p@chr9:35685631..35685657,+ | |||
}} | }} |
Latest revision as of 01:48, 1 August 2015
Short description: | p@chr9:35685631..35685657, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:35685631..35685657, + |
Coexpression cluster: | C638_skeletal_tongue_Adipocyte_diaphragm_penis_throat_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 5.37e-33 | 58 |
myoblast | 5.37e-33 | 58 |
multi-potent skeletal muscle stem cell | 5.37e-33 | 58 |
muscle cell | 7.20e-32 | 55 |
electrically responsive cell | 1.07e-27 | 61 |
electrically active cell | 1.07e-27 | 61 |
smooth muscle cell | 1.24e-26 | 43 |
smooth muscle myoblast | 1.24e-26 | 43 |
vascular associated smooth muscle cell | 3.85e-22 | 32 |
mesodermal cell | 2.68e-17 | 121 |
fibroblast | 1.44e-09 | 76 |
multi fate stem cell | 2.31e-08 | 427 |
somatic stem cell | 1.03e-07 | 433 |
aortic smooth muscle cell | 2.94e-07 | 10 |
stem cell | 6.69e-07 | 441 |