FFCP PHASE1:Hg19::chr9:35685445..35685517,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:35685445..35685517,+ to FFCP PHASE1:Hg19::chr9:35685445..35685517,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:35685445..35685517,+ | |||
|coexpression_cluster_id=C638 | |||
|description=CAGE_peak_at_chr9:35685445..35685517,+ | |||
|id=chr9:35685445..35685517,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.78e-34!180;CL:0000680!1.52e-24!57;CL:0000056!1.52e-24!57;CL:0000355!1.52e-24!57;CL:0000187!7.25e-24!54;CL:0000183!9.10e-24!59;CL:0000393!3.55e-23!60;CL:0000211!3.55e-23!60;CL:0000192!6.73e-20!42;CL:0000514!6.73e-20!42;CL:0000359!1.13e-16!32;CL:0000222!1.26e-14!119;CL:0000057!1.14e-12!75;CL:0000220!9.90e-08!246;CL:0002321!1.10e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.49e-17;32!CL:0000192;5.16e-16;43!CL:0000187;3.40e-15;55!CL:0000393;2.61e-13;61!CL:0000211;2.61e-13;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.62e-28,58;CL:0000056,2.62e-28,58;CL:0000355,2.62e-28,58;CL:0000187,1.61e-27,55;CL:0000393,1.63e-26,61;CL:0000211,1.63e-26,61;CL:0000192,6.39e-23,43;CL:0000514,6.39e-23,43;CL:0000359,5.45e-19,32;CL:0000222,5.16e-16,121;CL:0000057,1.07e-14,76;CL:0000048,1.32e-08,427;CL:0000723,9.09e-08,433;CL:0000034,5.96e-07,441;CL:0002321,7.48e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;5.16e-16;43!CL:0000355;1.11e-14;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!4.28e-30!70;UBERON:0000914!8.40e-30!83;UBERON:0002329!8.40e-30!83;UBERON:0003077!8.40e-30!83;UBERON:0003059!8.40e-30!83;UBERON:0007282!8.40e-30!83;UBERON:0009618!8.40e-30!83;UBERON:0007285!8.40e-30!83;UBERON:0002385!1.46e-27!63;UBERON:0001015!1.46e-27!63;UBERON:0000383!1.46e-27!63;UBERON:0001134!2.39e-27!61;UBERON:0002036!2.39e-27!61;UBERON:0003082!2.39e-27!61;UBERON:0000486!2.05e-24!82;UBERON:0005256!2.82e-20!143;UBERON:0003104!1.65e-15!238;UBERON:0009142!1.65e-15!238;UBERON:0002100!3.18e-14!216;UBERON:0000926!1.88e-13!448;UBERON:0004120!1.88e-13!448;UBERON:0006603!1.88e-13!448;UBERON:0001637!1.98e-13!42;UBERON:0003509!1.98e-13!42;UBERON:0004572!1.98e-13!42;UBERON:0004872!2.86e-12!84;UBERON:0000481!4.55e-12!347;UBERON:0000468!4.43e-11!659;UBERON:0000490!5.49e-11!138;UBERON:0002204!7.76e-11!167;UBERON:0001981!9.09e-11!60;UBERON:0007500!9.09e-11!60;UBERON:0004537!9.09e-11!60;UBERON:0006965!9.09e-11!60;UBERON:0004573!1.25e-10!33;UBERON:0004571!1.25e-10!33;UBERON:0002049!4.89e-10!79;UBERON:0007798!4.89e-10!79;UBERON:0003914!2.30e-08!118;UBERON:0000475!3.37e-08!365;UBERON:0000055!3.64e-08!69;UBERON:0001009!1.64e-07!113;UBERON:0004535!3.42e-07!110;UBERON:0000922!4.03e-07!612;UBERON:0000467!7.53e-07!625;UBERON:0001135!7.53e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.17e-14;31!UBERON:0001015;2.17e-14;31!UBERON:0000383;2.17e-14;31!UBERON:0004573;2.94e-10;33!UBERON:0004571;2.94e-10;33!UBERON:0001637;4.50e-10;42!UBERON:0003509;4.50e-10;42!UBERON:0004572;4.50e-10;42!UBERON:0001134;4.72e-09;16!UBERON:0002036;4.72e-09;16!UBERON:0002204;2.88e-08;70!UBERON:0001135;3.68e-07;15 | |||
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| ||
|short_description=p@chr9:35685445..35685517,+ | |||
}} | }} |
Latest revision as of 01:47, 1 August 2015
Short description: | p@chr9:35685445..35685517, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:35685445..35685517, + |
Coexpression cluster: | C638_skeletal_tongue_Adipocyte_diaphragm_penis_throat_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.62e-28 | 58 |
myoblast | 2.62e-28 | 58 |
multi-potent skeletal muscle stem cell | 2.62e-28 | 58 |
muscle cell | 1.61e-27 | 55 |
electrically responsive cell | 1.63e-26 | 61 |
electrically active cell | 1.63e-26 | 61 |
smooth muscle cell | 6.39e-23 | 43 |
smooth muscle myoblast | 6.39e-23 | 43 |
vascular associated smooth muscle cell | 5.45e-19 | 32 |
mesodermal cell | 5.16e-16 | 121 |
fibroblast | 1.07e-14 | 76 |
multi fate stem cell | 1.32e-08 | 427 |
somatic stem cell | 9.09e-08 | 433 |
stem cell | 5.96e-07 | 441 |
embryonic cell | 7.48e-07 | 250 |