FFCP PHASE1:Hg19::chr9:35650561..35650570,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27240 | |EntrezGene=27240 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17710 | |HGNC=17710 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-94bp_to_ENST00000486859_5end | |||
|cluster_id=chr9:35650561..35650570,- | |||
|coexpression_cluster_id=C419 | |||
|description=CAGE_peak_3_at_SIT1_5end | |||
|id=chr9:35650561..35650570,- | |||
|ontology_enrichment_celltype=CL:0000542!2.91e-35!53;CL:0000051!2.91e-35!53;CL:0000838!7.40e-32!52;CL:0000945!4.22e-30!24;CL:0000826!4.22e-30!24;CL:0002087!1.70e-13!119;CL:0000738!2.03e-12!140;CL:0002031!3.29e-11!124;CL:0000037!2.10e-09!172;CL:0000566!2.10e-09!172;CL:0002032!9.70e-09!165;CL:0000837!9.70e-09!165;CL:0000988!1.11e-08!182;CL:0000084!1.13e-08!25;CL:0000827!1.13e-08!25;CL:0000946!2.80e-07!1;CL:0000786!2.80e-07!1;CL:0000980!2.80e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000542;9.83e-11;53!CL:0000945;2.67e-09;24!CL:0000084;5.27e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.67e-16,52;CL:0000542,9.01e-16,53;CL:0000051,9.01e-16,53;CL:0000945,2.67e-09,24;CL:0000826,2.67e-09,24;CL:0000084,5.27e-09,25;CL:0000827,5.27e-09,25;CL:0002087,1.17e-07,115;CL:0002031,2.26e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;9.83e-11;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.63e-10!10;DOID:2531!9.60e-09!51;DOID:0060083!9.60e-09!51;DOID:630!4.57e-08!1;DOID:0050177!4.57e-08!1;DOID:0050427!4.57e-08!1;DOID:12603!5.58e-08!1;DOID:2355!2.04e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;2.42e-50;1!DOID:0050177;2.42e-50;1!DOID:0050427;2.42e-50;1!DOID:1036;1.49e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.42e-50,1;DOID:0050177,2.42e-50,1;DOID:0050427,2.42e-50,1;DOID:1036,1.49e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.08e-14!7;UBERON:0002106!4.93e-09!3;UBERON:0004854!4.93e-09!3;UBERON:0009034!4.93e-09!3;UBERON:0002095!4.93e-09!3;UBERON:0004782!4.93e-09!3;UBERON:0003281!4.93e-09!3;UBERON:0009664!4.93e-09!3;UBERON:0002296!4.93e-09!3;UBERON:0005602!4.93e-09!3;UBERON:0001179!4.93e-09!3;UBERON:0006293!4.93e-09!3;UBERON:0001154!1.48e-07!1;UBERON:0001153!1.48e-07!1;UBERON:0002370!6.08e-07!4;UBERON:0005058!6.08e-07!4;UBERON:0009113!6.08e-07!4;UBERON:0003295!6.08e-07!4;UBERON:0005562!6.08e-07!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p3@SIT1 | |||
}} | }} |
Latest revision as of 07:56, 17 September 2015
Short description: | p3@SIT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SIT1_5end |
Coexpression cluster: | C419_acute_chronic_thymus_xeroderma_Burkitt_Hodgkin_CD4 |
Association with transcript: | -94bp_to_ENST00000486859_5end |
EntrezGene: | SIT1 |
HGNC: | 17710 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.67e-16 | 52 |
lymphocyte | 9.01e-16 | 53 |
common lymphoid progenitor | 9.01e-16 | 53 |
lymphocyte of B lineage | 2.67e-09 | 24 |
pro-B cell | 2.67e-09 | 24 |
T cell | 5.27e-09 | 25 |
pro-T cell | 5.27e-09 | 25 |
nongranular leukocyte | 1.17e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.42e-50 | 1 |
monogenic disease | 2.42e-50 | 1 |
xeroderma pigmentosum | 2.42e-50 | 1 |
chronic leukemia | 1.49e-07 | 8 |