FFCP PHASE1:Hg19::chr9:23821842..23821848,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1993 | |EntrezGene=1993 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3313 | |HGNC=3313 | ||
|TSSclassifier=strong | |||
|UniProt=Q12926 | |UniProt=Q12926 | ||
|association_with_transcript=0bp_to_ENST00000544538,NM_001171195,uc003zpt.2_5end | |||
|cluster_id=chr9:23821842..23821848,- | |||
|coexpression_cluster_id=C4815 | |||
|description=CAGE_peak_8_at_ELAVL2_5end | |||
|id=chr9:23821842..23821848,- | |||
|ontology_enrichment_celltype=CL:0000540!9.18e-08!6;CL:0000031!9.18e-08!6;CL:0000404!9.18e-08!6;CL:0000221!9.23e-08!71;CL:0000047!1.55e-07!8;CL:0002322!4.34e-07!5;CL:0002319!6.60e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.58e-27;6!CL:0000404;4.58e-27;6!CL:0002319;2.00e-14;25!CL:0000123;3.10e-14;2!CL:0000242;3.10e-14;2!CL:1001319;1.07e-07;1!CL:1000600;1.07e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.21e-27,6;CL:0000031,2.21e-27,6;CL:0000404,2.21e-27,6;CL:0000047,1.65e-20,8;CL:0002319,1.39e-14,25;CL:0000242,2.02e-14,2;CL:1001319,7.97e-08,1;CL:1000600,7.97e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000031;4.58e-27;6 | |||
|ontology_enrichment_disease=DOID:1749!1.55e-07!14;DOID:305!3.98e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.78e-07;4!DOID:3905;5.10e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.20e-07,4;DOID:3905,5.55e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.62e-25!82;UBERON:0000073!3.89e-25!94;UBERON:0001016!3.89e-25!94;UBERON:0004121!5.15e-25!169;UBERON:0000924!5.63e-25!173;UBERON:0006601!5.63e-25!173;UBERON:0005743!5.75e-25!86;UBERON:0000955!5.76e-20!69;UBERON:0006238!5.76e-20!69;UBERON:0000033!6.34e-20!123;UBERON:0001049!1.56e-19!57;UBERON:0005068!1.56e-19!57;UBERON:0006241!1.56e-19!57;UBERON:0007135!1.56e-19!57;UBERON:0002619!1.12e-18!22;UBERON:0001950!1.38e-18!20;UBERON:0000153!2.79e-18!129;UBERON:0007811!2.79e-18!129;UBERON:0003075!5.13e-18!86;UBERON:0007284!5.13e-18!86;UBERON:0002346!8.93e-18!90;UBERON:0002020!1.63e-17!34;UBERON:0003528!1.63e-17!34;UBERON:0002616!2.58e-17!59;UBERON:0001869!3.55e-17!32;UBERON:0002780!1.71e-16!41;UBERON:0001890!1.71e-16!41;UBERON:0006240!1.71e-16!41;UBERON:0003080!6.29e-16!42;UBERON:0000956!7.38e-16!25;UBERON:0000203!7.38e-16!25;UBERON:0001893!8.42e-16!34;UBERON:0002791!8.85e-15!33;UBERON:0003056!1.60e-14!61;UBERON:0000064!1.34e-08!219;UBERON:0002021!2.86e-08!5;UBERON:0003729!1.45e-07!5;UBERON:0001871!3.61e-07!7;UBERON:0007023!4.89e-07!115;UBERON:0000473!8.12e-07!8;UBERON:0000200!9.50e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.66e-10;20!UBERON:0002619;1.51e-09;22!UBERON:0000956;2.20e-08;25!UBERON:0000203;2.20e-08;25!UBERON:0004645;1.07e-07;1!UBERON:0001256;1.07e-07;1!UBERON:0001259;1.07e-07;1!UBERON:0002791;8.79e-07;32!UBERON:0001869;8.79e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.26e-10,81;UBERON:0001950,2.00e-10,20;UBERON:0002619,1.79e-09,22;UBERON:0001016,2.39e-09,89;UBERON:0000956,2.55e-08,25;UBERON:0000203,2.55e-08,25;UBERON:0004645,7.97e-08,1;UBERON:0001256,7.97e-08,1;UBERON:0001259,7.97e-08,1 | |||
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| ||
|short_description=p8@ELAVL2 | |||
}} | }} |
Latest revision as of 00:08, 17 September 2015
Short description: | p8@ELAVL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ELAVL2_5end |
Coexpression cluster: | C4815_merkel_large_carcinoid_medulloblastoma_small_osteosarcoma_Neurons |
Association with transcript: | 0bp_to_ENST00000544538, NM_001171195, uc003zpt.2_5end |
EntrezGene: | ELAVL2 |
HGNC: | 3313 |
UniProt: | Q12926 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.21e-27 | 6 |
neuroblast | 2.21e-27 | 6 |
electrically signaling cell | 2.21e-27 | 6 |
neuronal stem cell | 1.65e-20 | 8 |
neural cell | 1.39e-14 | 25 |
Merkel cell | 2.02e-14 | 2 |
bladder cell | 7.97e-08 | 1 |
lower urinary tract cell | 7.97e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.26e-10 | 81 |
neocortex | 2.00e-10 | 20 |
regional part of cerebral cortex | 1.79e-09 | 22 |
nervous system | 2.39e-09 | 89 |
cerebral cortex | 2.55e-08 | 25 |
pallium | 2.55e-08 | 25 |
urinary bladder urothelium | 7.97e-08 | 1 |
wall of urinary bladder | 7.97e-08 | 1 |
mucosa of urinary bladder | 7.97e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.20e-07 | 4 |
lung carcinoma | 5.55e-07 | 9 |