FFCP PHASE1:Hg19::chr9:21031615..21031651,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:21031615..21031651,- to FFCP PHASE1:Hg19::chr9:21031615..21031651,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=401494 | |EntrezGene=401494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20920 | |HGNC=20920 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VWC8 | |UniProt=Q5VWC8 | ||
|association_with_transcript=0bp_to_ENST00000495827,NM_001010915,uc010miq.1,uc010mir.1_5end | |||
|cluster_id=chr9:21031615..21031651,- | |||
|coexpression_cluster_id=C1627 | |||
|description=CAGE_peak_1_at_PTPLAD2_5end | |||
|id=chr9:21031615..21031651,- | |||
|ontology_enrichment_celltype=CL:0000037!6.75e-29!172;CL:0000566!6.75e-29!172;CL:0000738!1.19e-28!140;CL:0002087!8.49e-28!119;CL:0002032!8.66e-28!165;CL:0000837!8.66e-28!165;CL:0002320!5.05e-26!365;CL:0000988!2.01e-25!182;CL:0000134!1.35e-24!358;CL:0002031!3.36e-23!124;CL:0002057!1.20e-22!42;CL:0000766!6.27e-22!76;CL:0002009!1.60e-21!65;CL:0002194!3.76e-21!63;CL:0000576!3.76e-21!63;CL:0000040!3.76e-21!63;CL:0000559!3.76e-21!63;CL:0000763!7.16e-21!112;CL:0000049!7.16e-21!112;CL:0000860!1.46e-18!45;CL:0000557!4.33e-18!71;CL:0000048!2.75e-17!430;CL:0000723!3.57e-17!436;CL:0000034!6.11e-17!444;CL:0000839!7.37e-17!70;CL:0000219!9.17e-16!390;CL:0002371!4.84e-09!591;CL:0000791!7.36e-09!18;CL:0000789!7.36e-09!18;CL:0002420!7.36e-09!18;CL:0002419!7.36e-09!18;CL:0000790!7.36e-09!18;CL:0002393!3.41e-07!9;CL:0002397!3.41e-07!9;CL:0000625!6.48e-07!11;CL:0000838!7.71e-07!52;CL:0000542!8.02e-07!53;CL:0000051!8.02e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000576;7.48e-16;48!CL:0000860;1.41e-15;33!CL:0002057;1.41e-15;33!CL:0000473;8.40e-15;39!CL:0000234;8.40e-15;39!CL:0000766;1.10e-11;69!CL:0002087;2.17e-09;104!CL:0000791;7.15e-09;18!CL:0000789;7.15e-09;18!CL:0002419;7.15e-09;18!CL:0000763;3.94e-08;100!CL:0000738;4.73e-07;136!CL:0000625;6.35e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.37e-31,168;CL:0000738,4.19e-31,136;CL:0002087,1.46e-30,115;CL:0002032,4.56e-30,161;CL:0000837,4.56e-30,161;CL:0002320,6.53e-28,361;CL:0000988,6.78e-28,177;CL:0000134,1.95e-26,354;CL:0002031,1.76e-25,120;CL:0002009,4.41e-25,61;CL:0000766,5.00e-25,72;CL:0002194,9.55e-25,59;CL:0000576,9.55e-25,59;CL:0000040,9.55e-25,59;CL:0000559,9.55e-25,59;CL:0000473,1.66e-24,48;CL:0000234,1.66e-24,48;CL:0000763,2.62e-23,108;CL:0000049,2.62e-23,108;CL:0000860,1.10e-22,42;CL:0002057,1.10e-22,42;CL:0000557,6.32e-21,67;CL:0000839,1.39e-19,66;CL:0000048,8.10e-19,427;CL:0000723,1.04e-18,433;CL:0000034,1.85e-18,441;CL:0000219,3.82e-17,386;CL:0000791,7.14e-09,18;CL:0000789,7.14e-09,18;CL:0002420,7.14e-09,18;CL:0002419,7.14e-09,18;CL:0000790,7.14e-09,18;CL:0002393,3.33e-07,9;CL:0002397,3.33e-07,9;CL:0000625,6.34e-07,11;CL:0000838,7.89e-07,52;CL:0000542,8.20e-07,53;CL:0000051,8.20e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-16;42!CL:0000790;7.15e-09;18!CL:0000049;3.79e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.07e-24!102;UBERON:0003061!3.07e-24!102;UBERON:0002384!5.83e-24!375;UBERON:0002193!3.34e-22!112;UBERON:0002371!3.54e-19!80;UBERON:0004765!1.34e-16!101;UBERON:0001434!1.34e-16!101;UBERON:0001474!5.31e-15!86;UBERON:0002405!8.87e-12!115;UBERON:0002204!2.11e-09!167;UBERON:0003081!4.70e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.01e-27,98;UBERON:0003061,5.01e-27,98;UBERON:0002384,1.28e-25,371;UBERON:0002193,1.14e-24,108;UBERON:0002371,6.76e-22,76;UBERON:0002405,2.17e-20,93;UBERON:0004765,6.40e-20,90;UBERON:0001434,1.11e-19,100;UBERON:0001474,3.71e-17,82;UBERON:0002204,2.94e-11,167;UBERON:0003081,1.14e-08,203;UBERON:0000926,4.02e-08,315;UBERON:0004120,4.02e-08,315;UBERON:0006603,4.02e-08,315 | |||
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| ||
|short_description=p1@PTPLAD2 | |||
}} | }} |
Latest revision as of 22:18, 16 September 2015
Short description: | p1@PTPLAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTPLAD2_5end |
Coexpression cluster: | C1627_Whole_Neutrophils_CD14CD16_CD14_blood_CD8_Eosinophils |
Association with transcript: | 0bp_to_ENST00000495827, NM_001010915, uc010miq.1, uc010mir.1_5end |
EntrezGene: | PTPLAD2 |
HGNC: | 20920 |
UniProt: | Q5VWC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.01e-27 | 98 |
blood island | 5.01e-27 | 98 |
connective tissue | 1.28e-25 | 371 |
hemolymphoid system | 1.14e-24 | 108 |
bone marrow | 6.76e-22 | 76 |
immune system | 2.17e-20 | 93 |
skeletal element | 6.40e-20 | 90 |
skeletal system | 1.11e-19 | 100 |
bone element | 3.71e-17 | 82 |
musculoskeletal system | 2.94e-11 | 167 |
lateral plate mesoderm | 1.14e-08 | 203 |
mesoderm | 4.02e-08 | 315 |
mesoderm-derived structure | 4.02e-08 | 315 |
presumptive mesoderm | 4.02e-08 | 315 |