FFCP PHASE1:Hg19::chr9:2017343..2017350,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr9:2017343..2017350,+ to FFCP PHASE1:Hg19::chr9:2017343..2017350,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6595 | |EntrezGene=6595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11098 | |HGNC=11098 | ||
|TSSclassifier=strong | |||
|UniProt=F6QYQ1 | |UniProt=F6QYQ1 | ||
|association_with_transcript=-88bp_to_ENST00000439732_5end | |||
|cluster_id=chr9:2017343..2017350,+ | |||
|description=CAGE_peak_28_at_SMARCA2_5end | |||
|id=chr9:2017343..2017350,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;3.28e-23;1!CL:0002372;3.28e-23;1!CL:0002615;1.21e-08;3!CL:0000056;8.61e-07;4!CL:0000737;8.61e-07;4!CL:0000306;8.61e-07;4!CL:0002222;8.61e-07;4!CL:0002224;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,3.28e-23,1;CL:0002372,3.28e-23,1;CL:0002615,1.51e-08,3;CL:0000306,8.14e-07,4;CL:0002222,8.14e-07,4;CL:0002224,8.14e-07,4;CL:0000737,8.61e-07,4;CL:0000515,8.61e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;8.61e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-33!115;UBERON:0001049!1.16e-20!57;UBERON:0005068!1.16e-20!57;UBERON:0006241!1.16e-20!57;UBERON:0007135!1.16e-20!57;UBERON:0000955!1.49e-20!69;UBERON:0006238!1.49e-20!69;UBERON:0001017!4.52e-20!82;UBERON:0002616!1.26e-19!59;UBERON:0005743!4.15e-19!86;UBERON:0000153!2.66e-18!129;UBERON:0007811!2.66e-18!129;UBERON:0002020!4.26e-18!34;UBERON:0003528!4.26e-18!34;UBERON:0000073!4.55e-18!94;UBERON:0001016!4.55e-18!94;UBERON:0001893!8.32e-18!34;UBERON:0003080!9.46e-18!42;UBERON:0001869!9.54e-18!32;UBERON:0003075!3.01e-17!86;UBERON:0007284!3.01e-17!86;UBERON:0002791!3.12e-17!33;UBERON:0000033!3.79e-17!123;UBERON:0002780!7.46e-17!41;UBERON:0001890!7.46e-17!41;UBERON:0006240!7.46e-17!41;UBERON:0002346!1.30e-16!90;UBERON:0004121!3.11e-15!169;UBERON:0000924!5.58e-15!173;UBERON:0006601!5.58e-15!173;UBERON:0000956!1.55e-13!25;UBERON:0000203!1.55e-13!25;UBERON:0003056!7.62e-13!61;UBERON:0002619!9.42e-12!22;UBERON:0000475!6.07e-11!365;UBERON:0001950!6.42e-10!20;UBERON:0000477!7.43e-10!286;UBERON:0004111!7.15e-08!241;UBERON:0000025!2.04e-07!194;UBERON:0000483!5.03e-07!309;UBERON:0000119!5.20e-07!312;UBERON:0000481!7.70e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;3.28e-23;1!UBERON:0000014;8.61e-07;4!UBERON:0010077;8.61e-07;4!UBERON:0005389;8.61e-07;4!UBERON:0000484;8.61e-07;4!UBERON:0000965;8.61e-07;4!UBERON:0001803;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.10e-23,1;UBERON:0000014,7.70e-07,4;UBERON:0010077,8.14e-07,4;UBERON:0005389,8.14e-07,4;UBERON:0000484,8.14e-07,4;UBERON:0002546,8.14e-07,4;UBERON:0000965,8.14e-07,4;UBERON:0001803,8.14e-07,4;UBERON:0003073,8.14e-07,4;UBERON:0005426,8.14e-07,4 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0.397227542439656,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0,0,0.113432183160021,0,0.427114777637135,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0.337552664482532,0,0,0,0.323292113637624,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0.871533458600294,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0.384417447767103,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0,0,0.650060246036521,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0.178064071293475,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0.632758849437452,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0,0,0,2.50634477090067,0.169291777801603,0,0,0,0,0,0,0,0,0,2.46174797895425,0.270455678475983,0.66614393599564,0,0,0.73254089635947,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0.597743964753209,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.591860433821602,0,0,0.969332746095218,0.556608588971108,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0.995213339381022,0,0.438770794307945,0.10893846351899,0.278847488557207,0.307801034015188,0.113942055847001,0.23056390438806,0.179515288819544,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0.317873157960757,0,0,0,0.216388639742091,0,0.0884575645033392,1.22206028986725,0,0,0.104421949505455,0.539209063845416,0.802577647298789,0.234264445725339,0,0,0,0.789168805698781,0,0.61214552326098,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0.253243183823515,0,0.160317640503067,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.410716136675979,0,0,0,0.558564802544508,0.916641696046735,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0.795229689809303,0.681017030557878,0,0,0,0.2249738915515,0,0.364497339948148,0,0.157611414598396,0.209818352539992,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0.52893040697076,0.171086837884329,0,0.427149650270779,0.314408610199332,0,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0.612691153526923,0.983617892129413,0,0.886068179966986,0.122026264901963,0.500763722825999,0,0.332787154610557,0.434674820589684,0.138348634936231,0.124980407962107,0,0,0,0.468334905806882,0,0.298509605773748,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0.212574920101683,0,0,0.318004350653419,0,0.80057074828547,0,0,0.770750701157514,0,1.75597244962866,0,0.252071696221718,0.414943514785307,0.322951291263702,0,0,0,0,0,0,0,0,0.902523940191087,0,0.781514011233092,0,0,0,0.202612753855184,0,0.206686796501184,0.951237152908602,0.546974809018219,0.548257766857182,0.496211178389294,0,0,0,0.336283722218824,0,0,0.177404740325278,0,0.171488009437418,0.339848664884159,0.263091094251396,0,0,0.313972371402056,0.471346769748006,0,0.913158720509496,0,0,0.0714765441766563,0,0,0.347716544605159,0,0,0,0,0.430227358820278,0,0.0852134047591577,0.846774100381858,0,0,0,0,0.196300467230486,0.121917924982269,0,0.205325613712494,1.1598144313382,1.45713297917742,0,0,0,0.11294608203896,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.891139200981258,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0.275684698604535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| 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| ||
|short_description=p28@SMARCA2 | |||
}} | }} |
Latest revision as of 21:41, 16 September 2015
Short description: | p28@SMARCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_SMARCA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -88bp_to_ENST00000439732_5end |
EntrezGene: | SMARCA2 |
HGNC: | 11098 |
UniProt: | F6QYQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 3.28e-23 | 1 |
myotube | 3.28e-23 | 1 |
adipocyte of omentum tissue | 1.51e-08 | 3 |
crystallin accumulating cell | 8.14e-07 | 4 |
vertebrate lens cell | 8.14e-07 | 4 |
lens epithelial cell | 8.14e-07 | 4 |
striated muscle cell | 8.61e-07 | 4 |
skeletal muscle myoblast | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
surface | 2.10e-23 | 1 |
zone of skin | 7.70e-07 | 4 |
cuboidal epithelium | 8.14e-07 | 4 |
transparent eye structure | 8.14e-07 | 4 |
simple cuboidal epithelium | 8.14e-07 | 4 |
cranial placode | 8.14e-07 | 4 |
lens of camera-type eye | 8.14e-07 | 4 |
epithelium of lens | 8.14e-07 | 4 |
lens placode | 8.14e-07 | 4 |
lens vesicle | 8.14e-07 | 4 |