FFCP PHASE1:Hg19::chr9:123639433..123639444,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:123639433..123639444,- to FFCP PHASE1:Hg19::chr9:123639433..123639444,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26147 | |EntrezGene=26147 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24566 | |HGNC=24566 | ||
|TSSclassifier=strong | |||
|UniProt=B3KV88 | |UniProt=B3KV88 | ||
|association_with_transcript=21bp_to_ENST00000312189,ENST00000544082_5end | |||
|cluster_id=chr9:123639433..123639444,- | |||
|coexpression_cluster_id=C4795 | |||
|description=CAGE_peak_5_at_PHF19_5end | |||
|id=chr9:123639433..123639444,- | |||
|ontology_enrichment_celltype=CL:0000012!1.01e-15!682;CL:0000548!1.25e-15!679;CL:0000004!1.25e-15!679;CL:0000255!1.25e-15!679;CL:0000003!5.36e-13!722;CL:0002371!6.22e-09!591;CL:0000063!1.02e-08!578;CL:0000066!6.12e-08!254;CL:0000144!7.16e-08!625 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,4.82e-07,9;CL:0002397,4.82e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.67e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.35e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,9.10e-07,10;UBERON:0000358,9.10e-07,10;UBERON:0000307,9.10e-07,10;UBERON:0000091,9.10e-07,10;UBERON:0000087,9.10e-07,10;UBERON:0007010,9.10e-07,10;UBERON:0007806,9.10e-07,10;UBERON:0008780,9.10e-07,10;UBERON:0005728,9.10e-07,10;UBERON:0000487,9.81e-07,22 | |||
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| ||
|short_description=p5@PHF19 | |||
}} | }} |
Latest revision as of 19:50, 24 September 2015
Short description: | p5@PHF19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PHF19_5end |
Coexpression cluster: | C4795_chronic_hairy_Trabecular_Alveolar_Mesenchymal_Renal_CD14CD16 |
Association with transcript: | 21bp_to_ENST00000312189, ENST00000544082_5end |
EntrezGene: | PHF19 |
HGNC: | 24566 |
UniProt: | B3KV88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 4.82e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.82e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 9.10e-07 | 10 |
blastocyst | 9.10e-07 | 10 |
blastula | 9.10e-07 | 10 |
bilaminar disc | 9.10e-07 | 10 |
inner cell mass | 9.10e-07 | 10 |
cleaving embryo | 9.10e-07 | 10 |
connecting stalk | 9.10e-07 | 10 |
inner cell mass derived epiblast | 9.10e-07 | 10 |
extraembryonic mesoderm | 9.10e-07 | 10 |
simple squamous epithelium | 9.81e-07 | 22 |