FFCP PHASE1:Hg19::chr9:119163686..119163705,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:119163686..119163705,+ to FFCP PHASE1:Hg19::chr9:119163686..119163705,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5069 | |EntrezGene=5069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8602 | |HGNC=8602 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z613 | |UniProt=Q7Z613 | ||
|association_with_transcript=107bp_to_AY302185_5end | |||
|cluster_id=chr9:119163686..119163705,+ | |||
|coexpression_cluster_id=C776 | |||
|description=CAGE_peak_10_at_PAPPA_5end | |||
|id=chr9:119163686..119163705,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.96e-32!180;CL:0000680!5.39e-21!57;CL:0000056!5.39e-21!57;CL:0000355!5.39e-21!57;CL:0000057!1.81e-20!75;CL:0000187!4.14e-20!54;CL:0000192!7.52e-20!42;CL:0000514!7.52e-20!42;CL:0000359!1.07e-19!32;CL:0000393!2.88e-17!60;CL:0000211!2.88e-17!60;CL:0000183!5.05e-17!59;CL:0000048!4.98e-11!430;CL:0000723!1.21e-10!436;CL:0000034!5.64e-10!444;CL:0002539!1.25e-09!10;CL:0000144!1.82e-09!625;CL:0000222!4.05e-09!119;CL:0002334!1.74e-08!12;CL:0002494!2.78e-08!16;CL:0000548!2.87e-08!679;CL:0000004!2.87e-08!679;CL:0000255!2.87e-08!679;CL:0002371!5.14e-08!591;CL:0000012!5.82e-08!682;CL:0002620!4.91e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.46e-22;32!CL:0000192;5.78e-17;43!CL:0002539;6.46e-13;10!CL:0002494;3.78e-12;16!CL:0002334;1.03e-11;12!CL:0002548;2.55e-09;6!CL:0000187;2.75e-09;55!CL:0000134;1.42e-08;55!CL:0002595;1.30e-07;5!CL:0000393;2.11e-07;61!CL:0000211;2.11e-07;61!CL:0000569;3.60e-07;4!CL:1000306;6.33e-07;4!CL:0002547;6.33e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.38e-24,32;CL:0000192,6.49e-24,43;CL:0000514,6.49e-24,43;CL:0000187,4.92e-18,55;CL:0000680,1.26e-16,58;CL:0000056,1.26e-16,58;CL:0000355,1.26e-16,58;CL:0000393,2.32e-15,61;CL:0000211,2.32e-15,61;CL:0000057,1.06e-13,76;CL:0002539,6.72e-13,10;CL:0000048,2.61e-12,427;CL:0002494,3.29e-12,16;CL:0000723,8.69e-12,433;CL:0002334,9.92e-12,12;CL:0000034,4.07e-11,441;CL:0002548,1.87e-09,6;CL:0002595,2.89e-07,5;CL:0000222,5.27e-07,121;CL:0000569,5.36e-07,4;CL:0000011,5.36e-07,4;CL:1000306,8.18e-07,4;CL:0002547,8.18e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;5.78e-17;43!CL:0000355;2.65e-08;58!CL:0000011;3.60e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!2.41e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.62e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.78e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.74e-18!61;UBERON:0002036!1.74e-18!61;UBERON:0003082!1.74e-18!61;UBERON:0002385!2.31e-17!63;UBERON:0001015!2.31e-17!63;UBERON:0000383!2.31e-17!63;UBERON:0000914!9.31e-16!83;UBERON:0002329!9.31e-16!83;UBERON:0003077!9.31e-16!83;UBERON:0003059!9.31e-16!83;UBERON:0007282!9.31e-16!83;UBERON:0009618!9.31e-16!83;UBERON:0007285!9.31e-16!83;UBERON:0004290!1.35e-15!70;UBERON:0004872!9.80e-14!84;UBERON:0001637!2.67e-13!42;UBERON:0003509!2.67e-13!42;UBERON:0004572!2.67e-13!42;UBERON:0000486!6.92e-13!82;UBERON:0004573!1.03e-12!33;UBERON:0004571!1.03e-12!33;UBERON:0005256!4.91e-10!143;UBERON:0004237!1.25e-09!10;UBERON:0004695!1.25e-09!10;UBERON:0002111!1.25e-09!10;UBERON:0004178!1.25e-09!10;UBERON:0001135!2.16e-09!15;UBERON:0004535!4.06e-09!110;UBERON:0000490!5.84e-09!138;UBERON:0001981!6.24e-09!60;UBERON:0007500!6.24e-09!60;UBERON:0004537!6.24e-09!60;UBERON:0006965!6.24e-09!60;UBERON:0002049!6.25e-09!79;UBERON:0007798!6.25e-09!79;UBERON:0003914!6.95e-09!118;UBERON:0001009!1.86e-08!113;UBERON:0002100!1.71e-07!216;UBERON:0000992!3.79e-07!13;UBERON:0000947!9.74e-07!21;UBERON:0010191!9.74e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.15e-18;33!UBERON:0004571;2.15e-18;33!UBERON:0001637;1.06e-13;42!UBERON:0003509;1.06e-13;42!UBERON:0004572;1.06e-13;42!UBERON:0001135;1.98e-13;15!UBERON:0004237;6.46e-13;10!UBERON:0004695;6.46e-13;10!UBERON:0002111;6.46e-13;10!UBERON:0004178;6.46e-13;10!UBERON:0000947;7.33e-11;21!UBERON:0010191;7.33e-11;21!UBERON:0007500;6.82e-09;56!UBERON:0001981;6.82e-09;56!UBERON:0004537;6.82e-09;56!UBERON:0000992;9.03e-09;13!UBERON:0000948;5.45e-08;22!UBERON:0002118;6.39e-08;5!UBERON:0003834;1.30e-07;5!UBERON:0001533;1.30e-07;5!UBERON:0004797;6.33e-07;4!UBERON:0000415;6.33e-07;4!UBERON:0007240;6.33e-07;4!UBERON:0005742;6.33e-07;4!UBERON:0005734;6.33e-07;4!UBERON:0004664;6.33e-07;4!UBERON:0004663;6.33e-07;4!UBERON:0002049;8.45e-07;75!UBERON:0007798;8.45e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.86e-20,83;UBERON:0001637,2.14e-20,42;UBERON:0003509,2.14e-20,42;UBERON:0004572,2.14e-20,42;UBERON:0004573,1.22e-19,33;UBERON:0004571,1.22e-19,33;UBERON:0004535,2.78e-16,109;UBERON:0001009,1.68e-15,112;UBERON:0001134,5.74e-15,62;UBERON:0002036,5.74e-15,62;UBERON:0003082,5.74e-15,62;UBERON:0002049,1.72e-14,78;UBERON:0007798,1.72e-14,78;UBERON:0007500,2.90e-14,59;UBERON:0001981,2.90e-14,59;UBERON:0004537,2.90e-14,59;UBERON:0006965,2.90e-14,59;UBERON:0002385,3.20e-14,64;UBERON:0001015,3.20e-14,64;UBERON:0000383,3.20e-14,64;UBERON:0001135,1.29e-13,15;UBERON:0004237,6.72e-13,10;UBERON:0004695,6.72e-13,10;UBERON:0002111,6.72e-13,10;UBERON:0004178,6.72e-13,10;UBERON:0007524,1.99e-12,73;UBERON:0002329,5.82e-12,71;UBERON:0003059,5.82e-12,71;UBERON:0007282,5.82e-12,71;UBERON:0004290,5.82e-12,71;UBERON:0009618,5.82e-12,71;UBERON:0003077,1.12e-11,72;UBERON:0007285,1.12e-11,72;UBERON:0000055,2.77e-11,68;UBERON:0003914,5.13e-11,117;UBERON:0000947,8.68e-11,21;UBERON:0010191,8.68e-11,21;UBERON:0007503,3.88e-10,78;UBERON:0000486,8.47e-10,83;UBERON:0000992,1.08e-08,13;UBERON:0000948,1.67e-08,24;UBERON:0005498,1.67e-08,24;UBERON:0004140,1.67e-08,24;UBERON:0009881,1.67e-08,24;UBERON:0004141,1.67e-08,24;UBERON:0003084,1.67e-08,24;UBERON:0007005,1.67e-08,24;UBERON:0004139,1.67e-08,24;UBERON:0004291,1.67e-08,24;UBERON:0000926,5.37e-08,315;UBERON:0004120,5.37e-08,315;UBERON:0006603,5.37e-08,315;UBERON:0002118,5.90e-08,5;UBERON:0003834,2.89e-07,5;UBERON:0001533,2.89e-07,5;UBERON:0007100,3.38e-07,27;UBERON:0000415,8.18e-07,4;UBERON:0007240,8.18e-07,4;UBERON:0005742,8.18e-07,4;UBERON:0005734,8.18e-07,4;UBERON:0004664,8.18e-07,4;UBERON:0004663,8.18e-07,4 | |||
|phase1_expression=1.63510541343501,1.2846031433459,0.986680828671798,2.00146596706261,1.34088328328186,0,0,0,0,0,0,1.74753097704138,0.791300934685361,0.495065411840187,0.331397375727916,21.5144046864568,22.2996975368871,11.684961446198,15.6138495612962,0,0,0,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.722878304769133,6.01605492763067,2.75208386025565,0,0.973269740605272,1.41802225746102,1.77383517970051,1.84453049955565,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.2663051166458,9.00382429529888,7.45775213946916,1.41867352879343,1.68203280042692,4.2699598291882,2.4666754841716,1.55605517699883,3.3677668017422,2.45192854670188,0,2.30470369792,0,0.624320153660641,0,0.298897361103602,0,0,0,0.204154171254893,0,0.103325781175765,1.18800285728205,3.95627086845691,0,0,0,0,0.277064115484183,0,0,0.751190294532984,2.49550802952046,1.07633781413317,1.70845911054854,1.05965950579781,0.300091096084402,0.412210116953756,1.03056216018252,0.558350568994769,0.843881661206331,0.292311015483596,1.00973509697646,2.02509777013059,0.323292113637624,0.355009592516614,0.10075209822764,0.67824236924195,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,2.78620756819187,1.44375896333917,0,0.505754070234305,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0,2.40194934417936,0,0,0,0,1.62904152655162,0,2.88662684050547,0.115930404975077,1.6437217193015,0,0,0,0,0,0,0,0,0,0.671928512795438,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,1.68053230485111,0,1.690605505112,1.32969058292435,0,0.257207374262142,0,0,1.85871391755592,0,0,0.325736184293735,0.355391948742546,1.58390374586686,2.1100756394171,0,1.59956785891291,0,0,0,1.19812427745791,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.858840442033979,1.00034104211935,0.271265023699736,4.99130067673937,3.92543775353756,4.41566762095017,1.52283839490527,0.601892199455438,0,0,0.664225598535437,0,0.260650843404249,0,0,0,0,0,0.303127571446259,0,0.30239029332968,2.97729369382532,3.06923946576125,3.08726103876381,4.22859192543813,2.04682899626681,2.89537058058494,0,0.462629081407967,1.77561725313127,1.14978018419333,3.63478100428535,1.51073491997947,0,0,0,0.68888668898764,1.27463817604702,1.44236856455367,0,0.0770153371044148,0,0,0.844413031143006,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0,6.90374778039739,0,0,0,0,1.6068392984416,1.54673149267395,0.308097234229289,0.307007349452259,0.275673144969061,0.859361958946189,0.290033387828457,0.596586391912706,0,0,0,0,0,1.39453664789186,19.8331778503303,1.3940745403212,1.54016790088044,0.532306030317022,4.34966496037536,2.96518750566272,1.14499909393593,0.372158369359667,0.316379424718726,1.5250415513906,0,0.42793898803392,0.636406495851874,1.56989728039846,1.79872457583315,1.09814811894422,1.88499843753098,0,3.17020642346017,1.68503382495592,0,2.92456187557541,1.05650146756755,1.09199929126389,1.97967604735198,0,1.10273068709225,5.30751180192976,1.31535265576129,0,0.655894752046633,2.63783490051515,1.8589409885985,0.563391205064483,1.00387946542836,1.3754865741837,1.78335525740625,0,0.211107635297664,1.31717957183961,0,0,0,0,0,7.71979166369589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0.409074730008619,0,4.0435146396035,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.0769502585037971,0.569710279235006,0,0,0,11.1650405906172,4.1218917030838,12.7928346244472,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0,0.292357268344742,0,0,0.794305140223502,0,0.959293472527256,0,0,0,0.64127056201227,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,2.16179930125442,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0.179287339332845,0,0,0,0.25426853765475,0,12.963322368019,2.28611152076586,0,0,1.5334921960688,0.226624183040251,0,0,0,0.13223260174269,0.684347351537318,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0.468334905806882,0,1.79105763464249,0.934853239388898,0,0,0.251567901752575,0,4.34796129954155,1.05861646634267,3.73049281398673,4.58350964967865,4.30101271341996,5.84744045812686,0.776314784381297,5.80588690977198,0.53168342911599,6.78268580355254,1.20206087197775,4.95046775819434,1.62748293281865,2.36403256963327,2.47044281197723,1.39210127963548,5.97143833047924,0,0.343395705182793,1.6837474438296,0,0,0,0,0,0.23152247432383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| ||
|short_description=p10@PAPPA | |||
}} | }} |
Latest revision as of 18:20, 24 September 2015
Short description: | p10@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PAPPA_5end |
Coexpression cluster: | C776_chorionic_placenta_Smooth_Aortic_Fibroblast_leiomyoma_mesothelioma |
Association with transcript: | 107bp_to_AY302185_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | Q7Z613 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.38e-24 | 32 |
smooth muscle cell | 6.49e-24 | 43 |
smooth muscle myoblast | 6.49e-24 | 43 |
muscle cell | 4.92e-18 | 55 |
muscle precursor cell | 1.26e-16 | 58 |
myoblast | 1.26e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.26e-16 | 58 |
electrically responsive cell | 2.32e-15 | 61 |
electrically active cell | 2.32e-15 | 61 |
fibroblast | 1.06e-13 | 76 |
aortic smooth muscle cell | 6.72e-13 | 10 |
multi fate stem cell | 2.61e-12 | 427 |
cardiocyte | 3.29e-12 | 16 |
somatic stem cell | 8.69e-12 | 433 |
preadipocyte | 9.92e-12 | 12 |
stem cell | 4.07e-11 | 441 |
cardiac fibroblast | 1.87e-09 | 6 |
smooth muscle cell of the subclavian artery | 2.89e-07 | 5 |
mesodermal cell | 5.27e-07 | 121 |
cardiac mesenchymal cell | 5.36e-07 | 4 |
migratory trunk neural crest cell | 5.36e-07 | 4 |
fibroblast of tunica adventitia of artery | 8.18e-07 | 4 |
fibroblast of the aortic adventitia | 8.18e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.78e-12 | 14 |