FFCP PHASE1:Hg19::chr9:113341985..113342040,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:113341985..113342040,- to FFCP PHASE1:Hg19::chr9:113341985..113342040,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79987 | |EntrezGene=79987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15985 | |HGNC=15985 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000374469_5end | |||
|cluster_id=chr9:113341985..113342040,- | |||
|description=CAGE_peak_1_at_SVEP1_5end | |||
|id=chr9:113341985..113342040,- | |||
|ontology_enrichment_celltype=CL:0000055!2.83e-15!180;CL:0000057!1.47e-13!75;CL:0000136!5.71e-09!15;CL:0000680!1.79e-07!57;CL:0000056!1.79e-07!57;CL:0000355!1.79e-07!57;CL:0000187!6.94e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.02e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.98e-13,76;CL:0000136,9.42e-10,15;CL:0000680,6.79e-07,58;CL:0000056,6.79e-07,58;CL:0000355,6.79e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!5.96e-15!347;UBERON:0000475!8.21e-14!365;UBERON:0007023!6.54e-12!115;UBERON:0000477!3.93e-11!286;UBERON:0000468!1.14e-10!659;UBERON:0002385!2.63e-09!63;UBERON:0001015!2.63e-09!63;UBERON:0000383!2.63e-09!63;UBERON:0001134!9.37e-09!61;UBERON:0002036!9.37e-09!61;UBERON:0003082!9.37e-09!61;UBERON:0000914!4.04e-08!83;UBERON:0002329!4.04e-08!83;UBERON:0003077!4.04e-08!83;UBERON:0003059!4.04e-08!83;UBERON:0007282!4.04e-08!83;UBERON:0009618!4.04e-08!83;UBERON:0007285!4.04e-08!83;UBERON:0007100!8.94e-08!27;UBERON:0000467!1.69e-07!625;UBERON:0000480!2.33e-07!626;UBERON:0000948!2.35e-07!24;UBERON:0005498!2.35e-07!24;UBERON:0004140!2.35e-07!24;UBERON:0009881!2.35e-07!24;UBERON:0004141!2.35e-07!24;UBERON:0003084!2.35e-07!24;UBERON:0007005!2.35e-07!24;UBERON:0004139!2.35e-07!24;UBERON:0004291!2.35e-07!24;UBERON:0004457!2.51e-07!12;UBERON:0000042!2.51e-07!12;UBERON:0005256!2.81e-07!143;UBERON:0003104!3.62e-07!238;UBERON:0009142!3.62e-07!238;UBERON:0002100!5.38e-07!216;UBERON:0000062!8.36e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.63e-09;9!UBERON:0000042;8.63e-09;9!UBERON:0007100;1.71e-07;25!UBERON:0000948;5.91e-07;22!UBERON:0004905;7.61e-07;8!UBERON:0000982;7.61e-07;8!UBERON:0004770;7.61e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.19e-09,114;UBERON:0004457,7.44e-09,12;UBERON:0000042,7.44e-09,12;UBERON:0002385,1.55e-08,64;UBERON:0001015,1.55e-08,64;UBERON:0000383,1.55e-08,64;UBERON:0007100,3.88e-08,27;UBERON:0001134,6.33e-08,62;UBERON:0002036,6.33e-08,62;UBERON:0003082,6.33e-08,62;UBERON:0000948,1.32e-07,24;UBERON:0005498,1.32e-07,24;UBERON:0004140,1.32e-07,24;UBERON:0009881,1.32e-07,24;UBERON:0004141,1.32e-07,24;UBERON:0003084,1.32e-07,24;UBERON:0007005,1.32e-07,24;UBERON:0004139,1.32e-07,24;UBERON:0004291,1.32e-07,24;UBERON:0011216,3.23e-07,223;UBERON:0001007,7.47e-07,145;UBERON:0001555,7.47e-07,145;UBERON:0007026,7.47e-07,145;UBERON:0003104,8.15e-07,160;UBERON:0009142,8.15e-07,160;UBERON:0004905,8.31e-07,8;UBERON:0000982,8.31e-07,8;UBERON:0004770,8.31e-07,8 | |||
|phase1_expression=51.0516245750264,39.8226974437229,76.2563326159204,55.0403140942217,62.127592125393,48.8509573496206,5.06599756336621,1.26343974685366,47.0134130759709,0.491467873003018,0,0,0,4.33182235360163,25.5175979310495,2.6893005858071,1.20538905604795,5.11217063271161,1.46379839637152,0.246242116153576,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.2568239576754,1.34140171940727,9.20610445273418,5.42158728576849,14.0374614978049,13.6155727823174,0,0.973269740605272,0,0,0.087834785693126,3.66741411393595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,3.67228483827281,26.8790637050834,48.7622255272983,3.54668382198357,3.36406560085384,1.06748995729705,1.48000529050296,18.0502400531864,3.3677668017422,2.28846664358842,8.62737337576109,2.30470369792,1.17160715916898,0,0,0.597794722207204,0.117434498643765,0,0,2.04154171254893,0.982674538494144,2.16984140469107,9.50402285825643,11.8688126053707,5.46096817162816,5.03032699271367,0.841680569770331,0.750711119231785,2.21651292387346,3.07284334616587,1.83892677479412,14.2726155961267,1.36118619792025,0.89694817844431,5.55249210928275,9.32500365102072,1.20036438433761,4.12210116953756,5.92573242104947,2.04728541964749,2.19409231913646,2.43592512902997,7.57301322732343,13.7154348977026,18.912588647801,1.06502877754984,0.10075209822764,1.69560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,9.28735856063958,4.33127689001751,2.12952240071719,1.85443159085912,2.41011029883482,1.8749975364507,1.30727666455444,1.66089433377768,2.02246962240247,1.17732879075208,1.92373578473195,0,0,6.9967581926338,11.7606969108434,0,0,1.18157981336281,0,0,0.343135620597051,0.109750285408626,0,0,0,2.93227474779292,2.07986957055916,0,0,1.87853910777315,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,6.84289784090821,0,0,0,0.784917590417525,0.87192013766656,0.1466765716419,1.42198887333556,17.8828222925941,0,3.19125739901845,0,0.771622122786426,0,0.532844358032199,30.3113346555273,23.3327290318321,2.46972101034231,0.325736184293735,23.455868617008,0.791951872933429,20.4978776400519,15.6876022548053,15.5957866244009,0,0,0,0,0,0,3.18518874668674,1.02738161275192,2.32779252211864,0,0,0,0,0,7.8083912314573,0,0.167516265334349,1.91381625495949,0,0,0,12.6372236470714,4.00136416847742,10.8506009479894,2.28767947683888,9.27830741745241,18.6088849740043,8.31704046448264,7.52365249319297,2.27407504055985,7.24311499047534,0,0.184369168541703,4.69171518127647,0.979005787313703,0.343143423810856,0,0,0,0,0,0,14.6383606613078,28.3904650582916,7.01650236082684,33.5724571049937,22.0034117098682,5.95159508231348,38.5886972756977,0.154209693802656,0,0,0,0.232420756919918,0,0,0.184161977871793,7.80738247519326,9.650831904356,48.2537847050681,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,82.1236862832346,0.54941678891006,0.577566499444116,0,0,12.8547143875328,0.290012154876366,1.54048617114644,1.07452572308291,0.137836572484531,4.40423003959922,5.94568445048337,0.767039646744908,2.75999310504886,0.165284915360978,0.384380134730212,0,0.50578890427775,0,7.55549632393536,0,1.84820148105653,1.59691809095107,0,0,0,1.48863347743867,3.48017367190598,25.5444459857925,2.81487570442467,5.99114583247489,3.5002357271853,0,40.8310478714124,21.1393512896762,16.140299121359,2.02182481573316,0,0.842516912477962,7.80213982543345,1.21856744815642,0,11.1929927354548,19.3725441776586,4.52032466480971,0,1.99031692572366,3.5076070820301,0,1.31178950409327,0.811641507850816,0.92947049429925,1.12678241012897,0.430234056612155,7.56517615801033,0.7133421029625,0.709522128141196,16.2552879179201,50.0528237299051,0.75894634753143,2.0996083214699,0,0,0,71.7375761919057,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5878168627749,0,0,0,0.23874448473769,0,0,0,0.703347082052564,0.333926115068718,0,0,7.37217556528958,5.24939439509181,0,7.56788250515945,0,2.17727711363265,0,0,0,12.2317822989798,0,5.55684950723184,0.969332746095218,1.02044907978036,3.99227596002388,0,0,15.2249910841307,0,0,0,0.344743373241465,0.874813840149763,0.173624994933292,2.65722415744152,0.241192877250816,6.10326945268333,4.20201187738654,3.54657142744257,0.658156191461918,0,0.139423744278603,12.4659418776151,4.89950840142105,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97630965539252,13.2686346755009,9.16545217400438,0,0,0,0.943615861729479,11.236087062183,1.1713222286267,0,0,0,1.97292201424695,13.308978765353,0.91821828489147,28.8130803105905,0.300646838828985,0,1.32930774541437,0,0.313932918407225,0,0,0,0,0,0,10.6583267627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| ||
|short_description=p1@SVEP1 | |||
}} | }} |
Latest revision as of 03:31, 20 September 2015
Short description: | p1@SVEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SVEP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374469_5end |
EntrezGene: | SVEP1 |
HGNC: | 15985 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.98e-13 | 76 |
fat cell | 9.42e-10 | 15 |
muscle precursor cell | 6.79e-07 | 58 |
myoblast | 6.79e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.79e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.19e-09 | 114 |
cavity lining | 7.44e-09 | 12 |
serous membrane | 7.44e-09 | 12 |
muscle tissue | 1.55e-08 | 64 |
musculature | 1.55e-08 | 64 |
musculature of body | 1.55e-08 | 64 |
primary circulatory organ | 3.88e-08 | 27 |
skeletal muscle tissue | 6.33e-08 | 62 |
striated muscle tissue | 6.33e-08 | 62 |
myotome | 6.33e-08 | 62 |
heart | 1.32e-07 | 24 |
primitive heart tube | 1.32e-07 | 24 |
primary heart field | 1.32e-07 | 24 |
anterior lateral plate mesoderm | 1.32e-07 | 24 |
heart tube | 1.32e-07 | 24 |
heart primordium | 1.32e-07 | 24 |
cardiac mesoderm | 1.32e-07 | 24 |
cardiogenic plate | 1.32e-07 | 24 |
heart rudiment | 1.32e-07 | 24 |
organ system subdivision | 3.23e-07 | 223 |
digestive system | 7.47e-07 | 145 |
digestive tract | 7.47e-07 | 145 |
primitive gut | 7.47e-07 | 145 |
mesenchyme | 8.15e-07 | 160 |
entire embryonic mesenchyme | 8.15e-07 | 160 |
articulation | 8.31e-07 | 8 |
skeletal joint | 8.31e-07 | 8 |
articular system | 8.31e-07 | 8 |