FFCP PHASE1:Hg19::chr8:70745575..70745596,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:70745575..70745596,- to FFCP PHASE1:Hg19::chr8:70745575..70745596,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81796 | |EntrezGene=81796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19046 | |HGNC=19046 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1C0,B3KMU7,Q9H2Y9 | |UniProt=G3V1C0,B3KMU7,Q9H2Y9 | ||
|association_with_transcript=28bp_to_ENST00000524945,NM_001146008,uc003xyk.2_5end | |||
|cluster_id=chr8:70745575..70745596,- | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_1_at_SLCO5A1_5end | |||
|id=chr8:70745575..70745596,- | |||
|ontology_enrichment_celltype=CL:0000047!3.01e-10!8;CL:0000945!5.77e-10!24;CL:0000826!5.77e-10!24;CL:0002319!3.12e-08!25;CL:0000540!5.55e-08!6;CL:0000031!5.55e-08!6;CL:0000404!5.55e-08!6;CL:0000133!9.71e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.23e-13;25!CL:0000540;3.10e-12;6!CL:0000404;3.10e-12;6!CL:0000990;9.92e-11;8!CL:0002605;1.95e-09;3!CL:0000451;1.21e-08;10!CL:0000945;9.18e-08;24!CL:0000047;4.65e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.83e-17,8;CL:0002319,7.19e-13,25;CL:0000540,3.03e-12,6;CL:0000031,3.03e-12,6;CL:0000404,3.03e-12,6;CL:0000990,8.25e-11,8;CL:0002605,1.90e-09,3;CL:0000133,3.04e-09,59;CL:0000451,1.04e-08,10;CL:0000945,8.59e-08,24;CL:0000826,8.59e-08,24;CL:0000221,6.28e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;3.10e-12;6!CL:0000133;9.49e-07;59 | |||
|ontology_enrichment_disease=DOID:171!2.34e-12!10;DOID:3095!5.65e-11!22;DOID:2994!5.65e-11!22;DOID:169!1.51e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:171;3.47e-18;10!DOID:3095;7.60e-14;22!DOID:2994;7.60e-14;22!DOID:169;8.25e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.05e-18,10;DOID:3095,8.64e-14,22;DOID:2994,8.64e-14,22;DOID:169,7.35e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.89e-07!94;UBERON:0001016!9.89e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.74e-13;4!UBERON:0000923;3.74e-13;4!UBERON:0010316;3.74e-13;4!UBERON:0005291;3.74e-13;4!UBERON:0002050;1.67e-10;5!UBERON:0005423;1.67e-10;5!UBERON:0000922;6.76e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.91e-07,89 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.15224776835902,5.47497700291537,4.89616294419731,10.7742902104611,9.35946719729382,7.55623500611321,0,0,0,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0.800791974072025,0.574752439954483,0.661044872784862,0,2.27685187643779,1.17447437874188,0.764546456250458,0,0,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,0.0654895377488563,0,0,1.29818957461873,3.13433527138681,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0.286804595389004,0.731842236777572,0.530119073285941,1.2781333715647,0.621966330092223,1.26160425437814,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,1.85488647960123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0,4.57370323600434,11.712586847186,8.50617694055465,6.03058555203656,7.65526501983796,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,1.13733384070897,0,0,0,0,1.00337954770971,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0.27470839445503,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,5.19395104439289,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,1.13654458722565,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0.552567831062295,0,1.84083628503879,0.123084805461069,0,0,0.358042349351218,0,0,0,0,0,0.0927680981618513,7.98455192004777,0,0,0,0,0.254253650292766,0,0.344743373241465,8.16492917473112,0.694499979733169,0,0.361789315876224,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81305231664718,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0.468528891450678,0,0.391329237864179,0,0,0,7.95789180239274,0,0.150323419414493,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0.137041924646751,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0.558564802544508,0.458320848023367,0,0.199679000498991,0.429226048136571,1.78537165953498,0.671834724867263,0,0,0,0,0.0674035438541849,0.295282444544246,2.96356662230246,0,0,0.803765742325096,2.61324929534744,4.98528405635022,0.2249738915515,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0,0,0,1.42939065274673,2.64836788146173,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.471612915298998,0,1.9846640872478,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.221858103073705,0.18628920882415,0.968440444553616,0.249960815924213,0.303298235083296,6.85116800507922,0,0.936669811613763,3.33318365804898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0,8.57385358893309,5.58032329316125,5.23409261618701,0,0,0,0,0,1.54993481694734,0,0,0,0,1.66262682694747,0.862598491173454,46.3934528474894,0.764467467344097,8.48662649770126,17.431143448338,81.3018613539054,5.02780426175919,0,0.47317047000752,3.20228299314188,0,0,0,0,0,0.205116364240755,7.81422258287326,0.138314504928436,0,0,0,0,0,0,0,0,0.596748666348824,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0.126831620387814,6.01672289920042,0,2.48105589194647,15.300798259287,0,0,0,1.21393120847326,2.04895972216168,0,1.84374380089247,0,0,0,0,0,0.235479278551542,0.628462359664008,0,0,0,0,0.285906176706625,0,0,0.173858272302579,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0.223710863595585,0.098150233615243,0,1.29485767437579,0,0,0,14.0363678077263,0,0,3.27543637912984,0.109940516745429,1.50962843566674,0.0771741581079447,0,4.70317296361523,0,2.82811856521951,0,0,0,0,0.187967835959707,0.515663103788617,1.09935271517422,0,0,0,0,0.458729283404541,0,0,0,9.16336449714793,0,0,0,0,0.252332849670158,0.437062287854782,0,6.62927393322881,0.534434810531121,1.01084389488329,2.005660314339,0,0,0,0,0.213233981900981,0.714193294391221,3.29403440163631,4.34523000071005,0,0,0.202117188958219,0.653150243690884,1.71116650542641,0.404112318087525,0.0717222053926763,0,0.569822880276821,0,0,0,0,0.122241444182866,0,0,2.81783311027437,2.56454793842586 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.15224776835902,5.47497700291537,4.89616294419731,10.7742902104611,9.35946719729382,7.55623500611321,0,0,0,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0.800791974072025,0.574752439954483,0.661044872784862,0,2.27685187643779,1.17447437874188,0.764546456250458,0,0,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,0.0654895377488563,0,0,1.29818957461873,3.13433527138681,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0.286804595389004,0.731842236777572,0.530119073285941,1.2781333715647,0.621966330092223,1.26160425437814,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,1.85488647960123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0,4.57370323600434,11.712586847186,8.50617694055465,6.03058555203656,7.65526501983796,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,1.13733384070897,0,0,0,0,1.00337954770971,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0.27470839445503,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,5.19395104439289,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,1.13654458722565,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0.552567831062295,0,1.84083628503879,0.123084805461069,0,0,0.358042349351218,0,0,0,0,0,0.0927680981618513,7.98455192004777,0,0,0,0,0.254253650292766,0,0.344743373241465,8.16492917473112,0.694499979733169,0,0.361789315876224,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81305231664718,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0.468528891450678,0,0.391329237864179,0,0,0,7.95789180239274,0,0.150323419414493,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0.137041924646751,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0.558564802544508,0.458320848023367,0,0.199679000498991,0.429226048136571,1.78537165953498,0.671834724867263,0,0,0,0,0.0674035438541849,0.295282444544246,2.96356662230246,0,0,0.803765742325096,2.61324929534744,4.98528405635022,0.2249738915515,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0,0,0,1.42939065274673,2.64836788146173,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.471612915298998,0,1.9846640872478,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.221858103073705,0.18628920882415,0.968440444553616,0.249960815924213,0.303298235083296,6.85116800507922,0,0.936669811613763,3.33318365804898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0,8.57385358893309,5.58032329316125,5.23409261618701,0,0,0,0,0,1.54993481694734,0,0,0,0,1.66262682694747,0.862598491173454,46.3934528474894,0.764467467344097,8.48662649770126,17.431143448338,81.3018613539054,5.02780426175919,0,0.47317047000752,3.20228299314188,0,0,0,0,0,0.205116364240755,7.81422258287326,0.138314504928436,0,0,0,0,0,0,0,0,0.596748666348824,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0.126831620387814,6.01672289920042,0,2.48105589194647,15.300798259287,0,0,0,1.21393120847326,2.04895972216168,0,1.84374380089247,0,0,0,0,0,0.235479278551542,0.628462359664008,0,0,0,0,0.285906176706625,0,0,0.173858272302579,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0.223710863595585,0.098150233615243,0,1.29485767437579,0,0,0,14.0363678077263,0,0,3.27543637912984,0.109940516745429,1.50962843566674,0.0771741581079447,0,4.70317296361523,0,2.82811856521951,0,0,0,0,0.187967835959707,0.515663103788617,1.09935271517422,0,0,0,0,0.458729283404541,0,0,0,9.16336449714793,0,0,0,0,0.252332849670158,0.437062287854782,0,6.62927393322881,0.534434810531121,1.01084389488329,2.005660314339,0,0,0,0,0.213233981900981,0.714193294391221,3.29403440163631,4.34523000071005,0,0,0.202117188958219,0.653150243690884,1.71116650542641,0.404112318087525,0.0717222053926763,0,0.569822880276821,0,0,0,0,0.122241444182866,0,0,2.81783311027437,2.56454793842586 | ||
|short_description=p1@SLCO5A1 | |||
}} | }} |
Latest revision as of 23:48, 18 September 2015
Short description: | p1@SLCO5A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLCO5A1_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | 28bp_to_ENST00000524945, NM_001146008, uc003xyk.2_5end |
EntrezGene: | SLCO5A1 |
HGNC: | 19046 |
UniProt: | G3V1C0B3KMU7Q9H2Y9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.83e-17 | 8 |
neural cell | 7.19e-13 | 25 |
neuron | 3.03e-12 | 6 |
neuroblast | 3.03e-12 | 6 |
electrically signaling cell | 3.03e-12 | 6 |
conventional dendritic cell | 8.25e-11 | 8 |
astrocyte of the cerebral cortex | 1.90e-09 | 3 |
neurectodermal cell | 3.04e-09 | 59 |
dendritic cell | 1.04e-08 | 10 |
lymphocyte of B lineage | 8.59e-08 | 24 |
pro-B cell | 8.59e-08 | 24 |
ectodermal cell | 6.28e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.91e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.05e-18 | 10 |
germ cell and embryonal cancer | 8.64e-14 | 22 |
germ cell cancer | 8.64e-14 | 22 |
neuroendocrine tumor | 7.35e-08 | 6 |