FFCP PHASE1:Hg19::chr8:62627334..62627381,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:62627334..62627381,- to FFCP PHASE1:Hg19::chr8:62627334..62627381,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=444 | |EntrezGene=444 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=757 | |HGNC=757 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7A9,B4DQ07,Q8TB28,Q6NXR7,Q12797 | |UniProt=F8W7A9,B4DQ07,Q8TB28,Q6NXR7,Q12797 | ||
|association_with_transcript=-135bp_to_ENST00000389213,NM_001164754,NM_001164755,NM_001164756,NM_004318,NM_032466,uc003xuj.2,uc003xum.2,uc003xun.2,uc003xuo.2,uc003xur.2,uc003xus.2,uc011lek.1_5end | |||
|cluster_id=chr8:62627334..62627381,- | |||
|description=CAGE_peak_6_at_ASPH_5end | |||
|id=chr8:62627334..62627381,- | |||
|ontology_enrichment_celltype=CL:0000057!1.34e-12!75;CL:0000055!2.29e-10!180;CL:0000548!6.29e-09!679;CL:0000004!6.29e-09!679;CL:0000255!6.29e-09!679;CL:0000012!2.61e-08!682;CL:0000860!3.74e-08!45;CL:0002057!6.73e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.51e-17;33!CL:0002057;3.51e-17;33!CL:0000473;1.20e-12;39!CL:0000234;1.20e-12;39!CL:0000576;8.38e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.89e-13,42;CL:0002057,4.89e-13,42;CL:0000473,6.32e-12,48;CL:0000234,6.32e-12,48;CL:0000048,4.00e-10,427;CL:0000134,1.36e-09,354;CL:0000723,1.89e-09,433;CL:0002194,2.83e-09,59;CL:0000576,2.83e-09,59;CL:0000040,2.83e-09,59;CL:0000559,2.83e-09,59;CL:0002009,2.86e-09,61;CL:0002320,4.13e-09,361;CL:0000034,1.35e-08,441;CL:0000057,9.10e-08,76;CL:0000557,1.58e-07,67;CL:0000839,3.07e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-09;42 | |||
|ontology_enrichment_disease=DOID:0050687!3.13e-10!143;DOID:305!2.49e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.39e-09,143;DOID:305,1.23e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000062!6.32e-09!511;UBERON:0000467!1.86e-07!625;UBERON:0000468!2.20e-07!659;UBERON:0000480!2.83e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.97e-09,371;UBERON:0002371,8.72e-08,76;UBERON:0001474,6.31e-07,82 | |||
|phase1_expression=0.181678379270557,2.78330681058278,0.704772020479856,0,1.34088328328186,0,0,6.94891860769514,3.3954131665979,0,0,0.655324116390517,0,0.74259811776028,0.331397375727916,0,0.602694528023977,0.730310090387373,2.43966399395253,0.123121058076788,0.204000691244253,0,0,0,0.502170558379211,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0.142169232487422,0,0,0.200544447470142,0,0.223915474239924,0,0,1.89017710413434,2.64513160582167,2.18325655069035,1.85943229524548,2.87817521615278,4.95530193432166,5.17846306179871,5.37937483711111,8.51336027598907,2.41321976515633,3.87290810150296,1.35426486594342,1.50593871634084,2.45615535052061,3.37085226667627,2.75475503133812,6.09765151444578,0.639337125799041,1.9791078011203,3.78980949481101,4.68847225585964,3.77272010217159,6.80862269629368,5.60540024096017,9.54744927975624,6.25779502104242,8.90474263290978,1.81619850790011,8.83866326370155,3.48108626184973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.767175371061182,2.1686349143074,2.00535164254356,3.0417768981773,1.5905718941022,2.91980922181582,0.756278537312543,0.443458794925128,1.31752178539689,0.0654895377488563,0,0.370784442784429,0.649094787309367,1.0447784237956,1.59549552622638,0,0,0,0,0,0,0,0,0,0,0.775250277507987,0.35576626268671,1.00416183829401,1.61131726843659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.759783069987479,2.91300197789081,2.58152958673932,1.77334191099179,1.68203280042692,1.06748995729705,0.74000264525148,0.311211035399766,1.88594940897563,1.47115712802113,0.454072282934794,1.15235184896,0.70296429550139,4.68240115245481,0,0.298897361103602,0.352303495931295,0.647491777472526,0.280901613404497,1.42907919878425,0.61417158655884,1.34323515528495,1.18800285728205,2.22540236350701,1.82032272387605,0.718618141816238,0.673344455816265,1.12606667884768,2.49357703935765,0.877955241761676,0.919463387397059,0.751190294532984,0.680593098960126,0.89694817844431,1.2813443329114,3.39091041855299,1.80054657650641,2.06105058476878,2.31876486041066,2.23340227597908,3.20675031258406,0.876933046450788,2.01947019395292,3.03764665519588,1.13152239773168,2.13005755509969,1.20902517873168,0.508681776931463,0.773043412653187,0.818238361772504,0.286804595389004,0,0.265059536642971,0.232387885739037,0.310983165046111,0.252320850875628,0,0,3.21620469096443,1.38134921352481,0,0,1.8929088006375,2.36018566109342,2.89213235860178,1.8749975364507,3.4860711054785,2.13543557199987,1.07865046528132,2.15843611637881,1.15424147083917,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.122988438543114,1.20097467208968,0.329250856225877,0,0.100528972411631,0.185176890317059,0,1.03993478527958,2.88662684050547,0.463721619900307,1.17408694235822,0.144366447761074,0,0.380508304469197,0,0,1.47730203652438,0.702012795417713,2.22946743433092,0,0.839910640994298,0.283550194484773,0.626909658919938,0.290633938513962,0.383382679165211,0,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0,0,0,0.308482478109971,0.300343057843917,0,0.336393253036082,0,0.95339771567235,1.68053230485111,0,3.381211010224,1.59562869950922,1.04007436911366,0.257207374262142,0,0.266422179016099,1.28680194292333,0.542621605391443,0,1.62868092146868,2.48774364119782,0.791951872933429,0.904318131178758,2.61460037580088,0.99972991182057,0,0.502257091432126,0,1.19812427745791,1.14861935834114,0,1.44781306667579,2.05476322550383,0.537182889719687,0,0,0,0,0.508189248444927,1.30139853857622,0.773288812777695,0,0,0,0,0,0.736148950314839,0.500170521059677,1.35632511849868,0.623912584592421,1.24900292158013,1.73472656537328,0.702848489956279,0,0,0,1.99267679560631,0.921845842708516,2.60650843404249,0.195801157462741,0,0,0,0,0,0,0,0.744323423456331,0.767309866440312,0.841980283299221,1.15325234330131,0.511707249066704,1.12597744800525,1.48418066444991,0.925258162815933,1.06537035187876,1.64254312027618,4.15403543346897,1.04589340613963,0.483437798366489,0.802025881213139,0.184161977871793,3.55924789310281,5.46273504020151,3.2781103739856,0,1.15523005656622,0,0,1.26661954671451,0,0,0.431831832204279,0,0,0.501689773854853,1.01950509218015,0,0.223874754722178,0,0,0.256450125116389,0,0,0.721287081534056,0.183138929636687,0,0.574265537996172,0,3.21367859688319,0.870036464629098,0.924291702687866,0.921022048356777,1.10269257987624,0.751941714077915,0.725083469571143,1.70453254832202,0.534192213880424,0.330569830721956,0,1.14851441245126,0.6069466851333,0.929691098594572,5.35180989612088,1.3940745403212,1.54016790088044,0,0,0.9266210955196,1.28812398067792,0,1.2655176988749,0.953150969619124,0.255897791311334,1.71175595213568,1.27281299170375,1.56989728039846,1.79872457583315,0.54907405947211,1.06031162111118,1.61745985258653,0,0.421258456238981,0.975267478179181,3.89941583410055,3.16950440270266,0.545999645631943,3.39373036688911,0,0.551365343546124,1.99031692572366,0,0,0,0.608731130888112,0.30982349809975,0.845086807596724,0.430234056612155,0.68774328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|phase1_expression=0.181678379270557,2.78330681058278,0.704772020479856,0,1.34088328328186,0,0,6.94891860769514,3.3954131665979,0,0,0.655324116390517,0,0.74259811776028,0.331397375727916,0,0.602694528023977,0.730310090387373,2.43966399395253,0.123121058076788,0.204000691244253,0,0,0,0.502170558379211,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0.142169232487422,0,0,0.200544447470142,0,0.223915474239924,0,0,1.89017710413434,2.64513160582167,2.18325655069035,1.85943229524548,2.87817521615278,4.95530193432166,5.17846306179871,5.37937483711111,8.51336027598907,2.41321976515633,3.87290810150296,1.35426486594342,1.50593871634084,2.45615535052061,3.37085226667627,2.75475503133812,6.09765151444578,0.639337125799041,1.9791078011203,3.78980949481101,4.68847225585964,3.77272010217159,6.80862269629368,5.60540024096017,9.54744927975624,6.25779502104242,8.90474263290978,1.81619850790011,8.83866326370155,3.48108626184973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.767175371061182,2.1686349143074,2.00535164254356,3.0417768981773,1.5905718941022,2.91980922181582,0.756278537312543,0.443458794925128,1.31752178539689,0.0654895377488563,0,0.370784442784429,0.649094787309367,1.0447784237956,1.59549552622638,0,0,0,0,0,0,0,0,0,0,0.775250277507987,0.35576626268671,1.00416183829401,1.61131726843659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.759783069987479,2.91300197789081,2.58152958673932,1.77334191099179,1.68203280042692,1.06748995729705,0.74000264525148,0.311211035399766,1.88594940897563,1.47115712802113,0.454072282934794,1.15235184896,0.70296429550139,4.68240115245481,0,0.298897361103602,0.352303495931295,0.647491777472526,0.280901613404497,1.42907919878425,0.61417158655884,1.34323515528495,1.18800285728205,2.22540236350701,1.82032272387605,0.718618141816238,0.673344455816265,1.12606667884768,2.49357703935765,0.877955241761676,0.919463387397059,0.751190294532984,0.680593098960126,0.89694817844431,1.2813443329114,3.39091041855299,1.80054657650641,2.06105058476878,2.31876486041066,2.23340227597908,3.20675031258406,0.876933046450788,2.01947019395292,3.03764665519588,1.13152239773168,2.13005755509969,1.20902517873168,0.508681776931463,0.773043412653187,0.818238361772504,0.286804595389004,0,0.265059536642971,0.232387885739037,0.310983165046111,0.252320850875628,0,0,3.21620469096443,1.38134921352481,0,0,1.8929088006375,2.36018566109342,2.89213235860178,1.8749975364507,3.4860711054785,2.13543557199987,1.07865046528132,2.15843611637881,1.15424147083917,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.122988438543114,1.20097467208968,0.329250856225877,0,0.100528972411631,0.185176890317059,0,1.03993478527958,2.88662684050547,0.463721619900307,1.17408694235822,0.144366447761074,0,0.380508304469197,0,0,1.47730203652438,0.702012795417713,2.22946743433092,0,0.839910640994298,0.283550194484773,0.626909658919938,0.290633938513962,0.383382679165211,0,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0,0,0,0.308482478109971,0.300343057843917,0,0.336393253036082,0,0.95339771567235,1.68053230485111,0,3.381211010224,1.59562869950922,1.04007436911366,0.257207374262142,0,0.266422179016099,1.28680194292333,0.542621605391443,0,1.62868092146868,2.48774364119782,0.791951872933429,0.904318131178758,2.61460037580088,0.99972991182057,0,0.502257091432126,0,1.19812427745791,1.14861935834114,0,1.44781306667579,2.05476322550383,0.537182889719687,0,0,0,0,0.508189248444927,1.30139853857622,0.773288812777695,0,0,0,0,0,0.736148950314839,0.500170521059677,1.35632511849868,0.623912584592421,1.24900292158013,1.73472656537328,0.702848489956279,0,0,0,1.99267679560631,0.921845842708516,2.60650843404249,0.195801157462741,0,0,0,0,0,0,0,0.744323423456331,0.767309866440312,0.841980283299221,1.15325234330131,0.511707249066704,1.12597744800525,1.48418066444991,0.925258162815933,1.06537035187876,1.64254312027618,4.15403543346897,1.04589340613963,0.483437798366489,0.802025881213139,0.184161977871793,3.55924789310281,5.46273504020151,3.2781103739856,0,1.15523005656622,0,0,1.26661954671451,0,0,0.431831832204279,0,0,0.501689773854853,1.01950509218015,0,0.223874754722178,0,0,0.256450125116389,0,0,0.721287081534056,0.183138929636687,0,0.574265537996172,0,3.21367859688319,0.870036464629098,0.924291702687866,0.921022048356777,1.10269257987624,0.751941714077915,0.725083469571143,1.70453254832202,0.534192213880424,0.330569830721956,0,1.14851441245126,0.6069466851333,0.929691098594572,5.35180989612088,1.3940745403212,1.54016790088044,0,0,0.9266210955196,1.28812398067792,0,1.2655176988749,0.953150969619124,0.255897791311334,1.71175595213568,1.27281299170375,1.56989728039846,1.79872457583315,0.54907405947211,1.06031162111118,1.61745985258653,0,0.421258456238981,0.975267478179181,3.89941583410055,3.16950440270266,0.545999645631943,3.39373036688911,0,0.551365343546124,1.99031692572366,0,0,0,0.608731130888112,0.30982349809975,0.845086807596724,0.430234056612155,0.68774328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| ||
|short_description=p6@ASPH | |||
}} | }} |
Latest revision as of 17:38, 18 September 2015
Short description: | p6@ASPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ASPH_5end |
Coexpression cluster: | NA |
Association with transcript: | -135bp_to_ENST00000389213, NM_001164754, NM_001164755, NM_001164756, NM_004318, NM_032466, uc003xuj.2, uc003xum.2, uc003xun.2, uc003xuo.2, uc003xur.2, uc003xus.2, uc011lek.1_5end |
EntrezGene: | ASPH |
HGNC: | 757 |
UniProt: | F8W7A9B4DQ07Q8TB28Q6NXR7Q12797 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.89e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.89e-13 | 42 |
defensive cell | 6.32e-12 | 48 |
phagocyte | 6.32e-12 | 48 |
multi fate stem cell | 4.00e-10 | 427 |
mesenchymal cell | 1.36e-09 | 354 |
somatic stem cell | 1.89e-09 | 433 |
monopoietic cell | 2.83e-09 | 59 |
monocyte | 2.83e-09 | 59 |
monoblast | 2.83e-09 | 59 |
promonocyte | 2.83e-09 | 59 |
macrophage dendritic cell progenitor | 2.86e-09 | 61 |
connective tissue cell | 4.13e-09 | 361 |
stem cell | 1.35e-08 | 441 |
fibroblast | 9.10e-08 | 76 |
granulocyte monocyte progenitor cell | 1.58e-07 | 67 |
myeloid lineage restricted progenitor cell | 3.07e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.97e-09 | 371 |
bone marrow | 8.72e-08 | 76 |
bone element | 6.31e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.39e-09 | 143 |
carcinoma | 1.23e-08 | 106 |