FFCP PHASE1:Hg19::chr8:623547..623569,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:623547..623569,- to FFCP PHASE1:Hg19::chr8:623547..623569,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=157697 | |EntrezGene=157697 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27234 | |HGNC=27234 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-85bp_to_ENST00000518895_5end | |||
|cluster_id=chr8:623547..623569,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_ERICH1_5end | |||
|id=chr8:623547..623569,- | |||
|ontology_enrichment_celltype=CL:0002057!1.72e-30!42;CL:0000860!2.34e-28!45;CL:0000766!2.43e-19!76;CL:0000738!2.75e-19!140;CL:0002194!3.74e-18!63;CL:0000576!3.74e-18!63;CL:0000040!3.74e-18!63;CL:0000559!3.74e-18!63;CL:0000037!4.83e-18!172;CL:0000566!4.83e-18!172;CL:0000763!9.10e-18!112;CL:0000049!9.10e-18!112;CL:0000557!9.85e-18!71;CL:0002009!1.07e-17!65;CL:0000839!1.75e-17!70;CL:0002032!2.97e-17!165;CL:0000837!2.97e-17!165;CL:0000988!1.15e-16!182;CL:0002087!1.71e-16!119;CL:0002031!3.66e-15!124;CL:0002393!7.76e-08!9;CL:0002397!7.76e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.10e-66;33!CL:0002057;6.10e-66;33!CL:0000473;6.96e-51;39!CL:0000234;6.96e-51;39!CL:0000576;3.47e-49;48!CL:0000766;6.86e-35;69!CL:0000763;9.84e-15;100!CL:0002393;1.93e-14;6!CL:0002397;1.93e-14;6!CL:0002087;1.48e-13;104!CL:0000738;4.01e-11;136!CL:0000875;1.27e-08;3!CL:0002396;1.27e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.64e-94,42;CL:0002057,8.64e-94,42;CL:0000473,1.07e-88,48;CL:0000234,1.07e-88,48;CL:0002194,1.60e-71,59;CL:0000576,1.60e-71,59;CL:0000040,1.60e-71,59;CL:0000559,1.60e-71,59;CL:0002009,9.17e-69,61;CL:0000766,1.71e-67,72;CL:0000839,1.35e-62,66;CL:0000557,1.80e-61,67;CL:0000763,4.25e-46,108;CL:0000049,4.25e-46,108;CL:0000738,2.89e-43,136;CL:0002087,4.90e-42,115;CL:0002031,2.92e-36,120;CL:0000037,2.61e-33,168;CL:0002032,1.38e-32,161;CL:0000837,1.38e-32,161;CL:0000988,4.43e-32,177;CL:0002393,2.15e-21,9;CL:0002397,2.15e-21,9;CL:0000134,1.24e-10,354;CL:0002320,3.96e-10,361;CL:0000875,1.21e-08,3;CL:0002396,1.21e-08,3;CL:0000219,2.27e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.51e-66;42!CL:0000049;1.81e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.83e-20!102;UBERON:0003061!6.83e-20!102;UBERON:0002193!8.27e-20!112;UBERON:0002371!6.88e-14!80;UBERON:0002405!1.48e-13!115;UBERON:0001474!1.61e-11!86;UBERON:0004765!1.16e-09!101;UBERON:0001434!1.16e-09!101;UBERON:0007023!6.75e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.19e-10;15!UBERON:0000179;3.19e-10;15!UBERON:0000463;3.19e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.00e-59,98;UBERON:0003061,3.00e-59,98;UBERON:0002371,1.14e-52,76;UBERON:0002193,2.37e-52,108;UBERON:0001474,7.21e-48,82;UBERON:0002405,1.34e-42,93;UBERON:0004765,1.85e-42,90;UBERON:0001434,6.50e-37,100;UBERON:0003081,3.50e-26,203;UBERON:0002204,5.71e-18,167;UBERON:0000926,2.32e-11,315;UBERON:0004120,2.32e-11,315;UBERON:0006603,2.32e-11,315;UBERON:0000178,4.71e-10,15;UBERON:0000179,4.71e-10,15;UBERON:0000463,4.71e-10,15;UBERON:0002384,1.92e-09,371 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0,0,0.893922188854576,0,0,0,0,0,0,0,0.263766978228454,0,0,0,1.20538905604795,0.730310090387373,0.975865597581014,0.123121058076788,0,0,0,0.273748850145768,0,0.458480434487708,0.328402357799783,0.393553906568396,1.18009283054671,0.767658796194425,1.23852898652861,0,0,0.369754010166788,0.309868802321207,0.284338464974843,0,2.76997704265939,5.81578897663411,2.38711957787437,0.223915474239924,0,0,5.96132778996215,2.64513160582167,4.12392904019288,2.78914844286822,1.23350366406548,5.26500830521676,8.05538698502021,5.63553554364021,7.33094912654614,4.13694816883942,2.5819387343353,5.41705946377367,3.57660445130949,1.91034305040492,2.47195832889593,3.06083892370903,1.28371610830437,5.11469700639233,7.25672860410775,5.18605509816243,5.96714650745772,2.03146467040009,1.70215567407342,3.11411124497787,7.28621129244555,6.25779502104242,6.73285418585862,3.02699751316684,5.89244217580104,3.79754864929061,6.12640330304631,4.46469029926591,3.14487968262564,4.26848798356681,3.15371474967163,6.10757229448904,11.4005097496499,8.55341711956087,4.93193215164512,0,0,0,0,0,0,0,0.954053754535364,1.1384259382189,0,0.764546456250458,0,0,0.263384084775077,0.196709770113833,1.17903228824749,0.411202997999018,0,0.651844533267181,0,0,0.222820913770347,0,0,0,0.384273959177026,0.260118695119756,0.164437904603676,0,0,0.593146252648242,0,0,0.226618685395132,1.14966148080576,0,0.253019692019503,0,0.651083453856419,0,0.451725357233318,0.255973222308837,1.24930726552346,0.710331756132051,0,0.201606743224732,0.802320587350522,0.579297615531196,0,0,0,0,0,0.289693037921647,0.795285947051099,0,0,0.665188192387692,0.175669571386252,0.327447688744282,0,0,0,0.174129737299267,1.59549552622638,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,2.68468263302986,0,0,0.0892997282840798,0,0.337834441449967,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0.352303495931295,0.161872944368132,0.280901613404497,0.204154171254893,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0.30648779579902,0.751190294532984,0,0,0.427114777637135,0.211931901159562,0.300091096084402,0.309157587715317,0,0.18611685633159,0.168776332241266,0.292311015483596,0,0.0920498986422993,0.323292113637624,0.355009592516614,0,0,0.193260853163297,0,0,0.487894824518382,0.530119073285941,0.348581828608555,0.621966330092223,0.504641701751257,0.36497735907583,0,0,0,0.928735856063958,0,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0,0,0,0,0,1.47008711385542,1.26755034821831,0,0,0,0,0,0,0,0.301586917234893,0.555530670951178,0,0,0,0,0,0.433099343283221,0.462985512576611,0.380508304469197,0,0.858486162094873,0,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0,0.492663237895943,0.176096868026452,0.414656231081544,0.576479813667846,0.25248486685276,0.063497894292169,0,0,0,0.411309970813294,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0.65147236858747,0,0,0.301439377059586,0,0.599837947092342,1.2162378064119,0,6.32501818449095,0,1.14861935834114,0,0,0.61642896765115,0,0.112085143993527,0,0,0.256686072559497,0.254094624222463,0,0,0,0,0,5.9832291840805,1.24324654030811,0.12269149171914,0,0.271265023699736,0,0.535286966391485,0.473107245101804,0,0,0,0,0,0,0.173767228936166,0,0,1.03384013061444,0.431428401637234,2.34800627167578,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,1.55776328755086,0.116210378459959,0.120859449591622,0.200506470303285,0.368323955743585,0,0.182091168006717,0.655622074797121,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,2.60024098414608,0,0.096670718292122,0,0.15350367472613,0,0,0.725083469571143,0.170453254832202,0,0,0.960950336825531,0.255225424989168,0.2023155617111,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0,0.424216295861138,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,1.52234282769651,0.764637207142375,1.13929437434833,0.714695326373367,1.23408681925858,1.29694662238543,2.16012574895246,3.17250070517708,0,0,0,0.185803175125719,0.144269212976445,0.142283686696828,0.159426272728822,0.798317485731266,0,0.423347165447766,0.649243880549111,0.561594356226918,0,0.47003968731907,0,0.677167111206413,0.642352300414798,1.00899853595524,0.851692475380653,0,0,0,0,0.19538809540204,0.556812347790485,0,0.270455678475983,0.66614393599564,0,0.18714054040822,0.146508179271894,0,0,0,0.23874448473769,0,0,2.98244294329889,0.562677665642051,0,0.16480387422676,0.211125408127993,0.1992479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| ||
|short_description=p3@ERICH1 | |||
}} | }} |
Latest revision as of 17:18, 18 September 2015
Short description: | p3@ERICH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ERICH1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -85bp_to_ENST00000518895_5end |
EntrezGene: | ERICH1 |
HGNC: | 27234 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.64e-94 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.64e-94 | 42 |
defensive cell | 1.07e-88 | 48 |
phagocyte | 1.07e-88 | 48 |
monopoietic cell | 1.60e-71 | 59 |
monocyte | 1.60e-71 | 59 |
monoblast | 1.60e-71 | 59 |
promonocyte | 1.60e-71 | 59 |
macrophage dendritic cell progenitor | 9.17e-69 | 61 |
myeloid leukocyte | 1.71e-67 | 72 |
myeloid lineage restricted progenitor cell | 1.35e-62 | 66 |
granulocyte monocyte progenitor cell | 1.80e-61 | 67 |
myeloid cell | 4.25e-46 | 108 |
common myeloid progenitor | 4.25e-46 | 108 |
leukocyte | 2.89e-43 | 136 |
nongranular leukocyte | 4.90e-42 | 115 |
hematopoietic lineage restricted progenitor cell | 2.92e-36 | 120 |
hematopoietic stem cell | 2.61e-33 | 168 |
hematopoietic oligopotent progenitor cell | 1.38e-32 | 161 |
hematopoietic multipotent progenitor cell | 1.38e-32 | 161 |
hematopoietic cell | 4.43e-32 | 177 |
intermediate monocyte | 2.15e-21 | 9 |
CD14-positive, CD16-positive monocyte | 2.15e-21 | 9 |
mesenchymal cell | 1.24e-10 | 354 |
connective tissue cell | 3.96e-10 | 361 |
non-classical monocyte | 1.21e-08 | 3 |
CD14-low, CD16-positive monocyte | 1.21e-08 | 3 |
motile cell | 2.27e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.00e-59 | 98 |
blood island | 3.00e-59 | 98 |
bone marrow | 1.14e-52 | 76 |
hemolymphoid system | 2.37e-52 | 108 |
bone element | 7.21e-48 | 82 |
immune system | 1.34e-42 | 93 |
skeletal element | 1.85e-42 | 90 |
skeletal system | 6.50e-37 | 100 |
lateral plate mesoderm | 3.50e-26 | 203 |
musculoskeletal system | 5.71e-18 | 167 |
mesoderm | 2.32e-11 | 315 |
mesoderm-derived structure | 2.32e-11 | 315 |
presumptive mesoderm | 2.32e-11 | 315 |
blood | 4.71e-10 | 15 |
haemolymphatic fluid | 4.71e-10 | 15 |
organism substance | 4.71e-10 | 15 |
connective tissue | 1.92e-09 | 371 |