FFCP PHASE1:Hg19::chr8:54934497..54934551,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:54934497..54934551,- to FFCP PHASE1:Hg19::chr8:54934497..54934551,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6917 | |EntrezGene=6917 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11612 | |HGNC=11612 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000521836_5end | |||
|cluster_id=chr8:54934497..54934551,- | |||
|description=CAGE_peak_6_at_TCEA1_5end | |||
|id=chr8:54934497..54934551,- | |||
|ontology_enrichment_celltype=CL:0000055!2.45e-11!180;CL:0000548!3.31e-08!679;CL:0000004!3.31e-08!679;CL:0000255!3.31e-08!679;CL:0000012!1.36e-07!682;CL:0000057!3.42e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.64e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.59e-10,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.00e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.51e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.05e-07,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.01e-08;9!UBERON:0000042;2.01e-08;9!UBERON:0003688;4.27e-08;6!UBERON:0002358;4.27e-08;6!UBERON:0003684;4.27e-08;6!UBERON:0001178;4.27e-08;6!UBERON:0000991;7.85e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004458,2.18e-08,49;UBERON:0003688,5.66e-08,6;UBERON:0002358,5.66e-08,6;UBERON:0003684,5.66e-08,6;UBERON:0001178,5.66e-08,6;UBERON:0002323,1.28e-07,46;UBERON:0000991,6.95e-07,21;UBERON:0009196,6.95e-07,21;UBERON:0009117,6.95e-07,21;UBERON:0005564,6.95e-07,21 | |||
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|phase1_expression=4.90531624030503,2.5692062866918,9.58489947852604,3.00219895059391,4.02264984984559,5.23403114460221,2.53299878168311,0,1.30592814099919,0,0,0.218441372130172,0.263766978228454,0.37129905888014,0.331397375727916,0.672325146451775,1.20538905604795,0.730310090387373,0.975865597581014,0,0.204000691244253,0.626909442956176,0,0.136874425072884,0.251085279189606,0.382067028739756,0.0821005894499457,0.236132343941038,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,1.93668001450754,1.13735385989937,0.293600439334847,0,0,0.217010870715852,0.447830948479849,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.449446968890169,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0.546138611262131,0,0,0.800791974072025,0,0.661044872784862,0.954053754535364,0,0.587237189370939,0.764546456250458,0,0,0,0,0,0.411202997999018,0.334372990781356,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0.236777252044017,0,0,0,0,0,1.34140171940727,2.68511379871414,3.61439152384566,3.00802746381534,5.64901423947212,0,3.40644409211845,0.472674085820339,0.221729397462564,0.263504357079378,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0,0,1.25849830862972,0,0,1.8089173141853,0.35576626268671,0.33472061276467,0,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,12.9212707440783,1.64619665163954,0.794455084879313,0.860509862246441,2.12801029319014,0.560677600142307,0,2.71334303258876,0.933633106199299,1.61652806483626,0.980771418680752,0,1.15235184896,0.234321431833797,0.312160076830321,0,1.34503812496621,0.587172493218824,0.971237666208789,0.421352420106746,1.02077085627447,0.245668634623536,2.06651562351531,1.18800285728205,5.43987244412825,0.910161361938026,0.718618141816238,1.17835279767846,0,0.831192346452549,0.877955241761676,1.22595118319608,3.15499923703853,0.680593098960126,0.717558542755448,9.1829677191984,3.60284231971255,1.20036438433761,2.67936576019941,0.257640540045629,5.58350568994769,0.675105328965065,3.50773218580315,0.757301322732344,6.81169249953015,3.87950536365149,0.355009592516614,1.5112814734146,0.508681776931463,1.35282597214308,1.36373060295417,0.860413786167011,3.17131635936948,1.32529768321485,1.2781333715647,2.28054321033815,3.28017106138317,0.72995471815166,0,1.28648187638577,0,0.464367928031979,2.16563844500876,0,0.337169380156203,0.241011029883482,0.110293972732394,0,0.474541238222193,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,1.26755034821831,1.96565443335525,0.590789906681404,0,0.491953754172454,0.171567810298526,0.548751427043128,0,0.402115889646523,0.925884451585296,0.977424915930974,0,0,0.115930404975077,1.40890433082986,0.144366447761074,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0.16798212819886,0.708875486211932,1.79117045405697,0.871901815541886,0.766765358330422,0,0.44024217006613,0,0,0.12624243342638,0.507983154337352,0.381988425558278,0,0,0.308482478109971,0.600686115687835,0.285826432630578,0.336393253036082,0.43596006883328,0.36669142910475,2.19761916788222,0,0.845302752556,6.64845291462176,1.04007436911366,0,0,0,2.43062589218851,0,0,0.325736184293735,2.13235169245527,0.791951872933429,0.301439377059586,1.74306691720059,0.099972991182057,0,0,0,5.03212196532324,5.7430967917057,0,0.723906533337896,1.02738161275192,0.716243852959582,3.81089489577993,0.197030760201927,0.431255149719035,0.385029108839245,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,3.25518028439683,4.57535895367776,4.28229573113188,5.99269177128952,5.85707074963566,9.63027519128701,6.82222512167955,6.2083842775503,1.32845119707087,1.84369168541703,1.73767228936166,0,0,0,0.215714200818617,0,0,1.66435439510497,0,9.42809669711352,0.767309866440312,8.70046292742528,12.5576366270587,7.16390148693385,8.84696566289841,1.48418066444991,0.308419387605311,1.59805552781814,0.657017248110473,0,0.697262270759755,0.604297247958111,0.601519410909855,3.77532054637175,1.60740227430449,2.1850940160806,4.85160335349869,0,0.770153371044148,0,1.46139224653261,0.527758144464379,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0.877039506583738,0.784306353074702,0,0,2.27764876265012,1.03041011647722,0.183138929636687,0.082509499920588,0,0,4.82051789532479,3.28680442193215,0.308097234229289,0.15350367472613,0,0.537101224341368,0.580066775656914,0.340906509664404,2.93805717634233,2.14870389969272,1.53752053892085,0.127612712494584,1.31505115112215,3.71876439437829,0.94443704049192,1.3940745403212,1.54016790088044,0,0.869932992075073,0.9266210955196,0.858749320451947,0,0.949138274156178,0.762520775695299,0,2.99557291623744,1.90921948755562,0,0.719489830333259,0.54907405947211,0.706874414074119,0.202182481573316,1.58510321173008,1.263775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| ||
|short_description=p6@TCEA1 | |||
}} | }} |
Latest revision as of 12:19, 18 September 2015
Short description: | p6@TCEA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TCEA1_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000521836_5end |
EntrezGene: | TCEA1 |
HGNC: | 11612 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.59e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
body cavity or lining | 2.18e-08 | 49 |
omentum | 5.66e-08 | 6 |
peritoneum | 5.66e-08 | 6 |
abdominal cavity | 5.66e-08 | 6 |
visceral peritoneum | 5.66e-08 | 6 |
body cavity | 1.28e-07 | 46 |
gonad | 6.95e-07 | 21 |
indifferent external genitalia | 6.95e-07 | 21 |
indifferent gonad | 6.95e-07 | 21 |
gonad primordium | 6.95e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.05e-07 | 14 |