FFCP PHASE1:Hg19::chr8:53853791..53853806,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:53853791..53853806,+ | |||
|description=CAGE_peak_at_chr8:53853791..53853806,+ | |||
|id=chr8:53853791..53853806,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.93e-12!254;CL:0000064!3.21e-11!3;CL:0005012!3.21e-11!3;CL:0000067!3.21e-11!3;CL:0002304!3.21e-11!3;CL:0000306!4.34e-08!4;CL:0002222!4.34e-08!4;CL:0002224!4.34e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000322;2.93e-23;3!CL:0000306;1.03e-17;4!CL:0002222;1.03e-17;4!CL:0002224;1.03e-17;4!CL:0002202;1.08e-08;9!CL:0002632;1.08e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,3.27e-23,3;CL:0000306,1.03e-17,4;CL:0002222,1.03e-17,4;CL:0002224,1.03e-17,4;CL:0002202,1.12e-08,9;CL:0002632,1.12e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.50e-14;5 | |||
|ontology_enrichment_disease=DOID:305!3.85e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:3910;4.27e-34;2!DOID:3908;1.50e-14;5!DOID:1325;8.57e-11;7!DOID:3904;8.57e-11;7!DOID:3905;1.08e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,5.04e-34,2;DOID:3908,1.60e-14,5;DOID:1325,8.99e-11,7;DOID:3904,8.99e-11,7;DOID:3905,1.12e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0007625!7.31e-24!11;UBERON:0000488!2.00e-14!4;UBERON:0000019!4.83e-13!19;UBERON:0000047!4.83e-13!19;UBERON:0004088!4.83e-13!19;UBERON:0003072!4.83e-13!19;UBERON:0003071!4.83e-13!19;UBERON:0004128!4.83e-13!19;UBERON:0000020!6.74e-13!23;UBERON:0000970!2.67e-12!20;UBERON:0001032!2.85e-12!24;UBERON:0004456!2.85e-12!24;UBERON:0002104!1.25e-11!21;UBERON:0001456!1.25e-11!21;UBERON:0001778!3.21e-11!3;UBERON:0001775!3.21e-11!3;UBERON:0001801!4.09e-11!14;UBERON:0002203!1.30e-09!6;UBERON:0001768!1.30e-09!6;UBERON:0010077!4.34e-08!4;UBERON:0005389!4.34e-08!4;UBERON:0000484!4.34e-08!4;UBERON:0002546!4.34e-08!4;UBERON:0000965!4.34e-08!4;UBERON:0001803!4.34e-08!4;UBERON:0003073!4.34e-08!4;UBERON:0005426!4.34e-08!4;UBERON:0005085!6.17e-08!29;UBERON:0002394!1.24e-07!4;UBERON:0003928!1.24e-07!4;UBERON:0001444!1.59e-07!48;UBERON:0002294!3.24e-07!7;UBERON:0001173!3.24e-07!7;UBERON:0004912!3.24e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;4.27e-34;2!UBERON:0002173;4.27e-34;2!UBERON:0002186;4.27e-34;2!UBERON:0004821;2.93e-23;3!UBERON:0007499;2.93e-23;3!UBERON:0003215;2.93e-23;3!UBERON:0010368;2.93e-23;3!UBERON:0009911;2.93e-23;3!UBERON:0002299;2.93e-23;3!UBERON:0006524;2.93e-23;3!UBERON:0008874;2.93e-23;3!UBERON:0002169;2.93e-23;3!UBERON:0004894;2.93e-23;3!UBERON:0009856;8.00e-18;4!UBERON:0010077;1.03e-17;4!UBERON:0005389;1.03e-17;4!UBERON:0000484;1.03e-17;4!UBERON:0000965;1.03e-17;4!UBERON:0001803;1.03e-17;4!UBERON:0002046;1.50e-14;5!UBERON:0000490;2.27e-08;33!UBERON:0000058;5.93e-08;10!UBERON:0007625;2.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,5.04e-34,2;UBERON:0002173,5.04e-34,2;UBERON:0002186,5.04e-34,2;UBERON:0004821,3.27e-23,3;UBERON:0003215,3.27e-23,3;UBERON:0010368,3.27e-23,3;UBERON:0009911,3.27e-23,3;UBERON:0002299,3.27e-23,3;UBERON:0006524,3.27e-23,3;UBERON:0008874,3.27e-23,3;UBERON:0002169,3.27e-23,3;UBERON:0004894,3.27e-23,3;UBERON:0010077,1.03e-17,4;UBERON:0005389,1.03e-17,4;UBERON:0000484,1.03e-17,4;UBERON:0002546,1.03e-17,4;UBERON:0000965,1.03e-17,4;UBERON:0001803,1.03e-17,4;UBERON:0003073,1.03e-17,4;UBERON:0005426,1.03e-17,4;UBERON:0002046,1.40e-14,5;UBERON:0004117,1.40e-14,5;UBERON:0007689,1.40e-14,5;UBERON:0007123,1.40e-14,5;UBERON:0003091,1.40e-14,5;UBERON:0000076,1.47e-09,8;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11;UBERON:0007625,2.63e-07,11 | |||
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| ||
|short_description=p@chr8:53853791..53853806,+ | |||
}} | }} |
Latest revision as of 18:51, 31 July 2015
Short description: | p@chr8:53853791..53853806, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:53853791..53853806, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 3.27e-23 | 3 |
crystallin accumulating cell | 1.03e-17 | 4 |
vertebrate lens cell | 1.03e-17 | 4 |
lens epithelial cell | 1.03e-17 | 4 |
epithelial cell of tracheobronchial tree | 1.12e-08 | 9 |
epithelial cell of lower respiratory tract | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 5.04e-34 | 2 |
alveolar duct | 5.04e-34 | 2 |
bronchiole | 5.04e-34 | 2 |
pulmonary alveolus epithelium | 3.27e-23 | 3 |
alveolus | 3.27e-23 | 3 |
pulmonary lobule | 3.27e-23 | 3 |
lobule | 3.27e-23 | 3 |
alveolus of lung | 3.27e-23 | 3 |
alveolar system | 3.27e-23 | 3 |
pulmonary acinus | 3.27e-23 | 3 |
alveolar sac | 3.27e-23 | 3 |
alveolar wall | 3.27e-23 | 3 |
cuboidal epithelium | 1.03e-17 | 4 |
transparent eye structure | 1.03e-17 | 4 |
simple cuboidal epithelium | 1.03e-17 | 4 |
cranial placode | 1.03e-17 | 4 |
lens of camera-type eye | 1.03e-17 | 4 |
epithelium of lens | 1.03e-17 | 4 |
lens placode | 1.03e-17 | 4 |
lens vesicle | 1.03e-17 | 4 |
thyroid gland | 1.40e-14 | 5 |
pharyngeal pouch | 1.40e-14 | 5 |
thyroid diverticulum | 1.40e-14 | 5 |
pharyngeal pouch 2 | 1.40e-14 | 5 |
thyroid primordium | 1.40e-14 | 5 |
external ectoderm | 1.47e-09 | 8 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |
pigment epithelium of eye | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 5.04e-34 | 2 |
non-small cell lung carcinoma | 1.60e-14 | 5 |
bronchus cancer | 8.99e-11 | 7 |
bronchogenic carcinoma | 8.99e-11 | 7 |
lung carcinoma | 1.12e-08 | 9 |