FFCP PHASE1:Hg19::chr8:144679264..144679283,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:144679264..144679283,- to FFCP PHASE1:Hg19::chr8:144679264..144679283,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1936 | |EntrezGene=1936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3211 | |HGNC=3211 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJ84,E9PIP5 | |UniProt=E9PJ84,E9PIP5 | ||
|association_with_transcript=0bp_to_ENST00000526133,ENST00000531953_5end | |||
|cluster_id=chr8:144679264..144679283,- | |||
|description=CAGE_peak_4_at_EEF1D_5end | |||
|id=chr8:144679264..144679283,- | |||
|ontology_enrichment_celltype=CL:0000055!1.38e-29!180;CL:0002321!3.62e-23!248;CL:0000220!1.06e-22!246;CL:0000183!9.68e-19!59;CL:0000680!2.58e-18!57;CL:0000056!2.58e-18!57;CL:0000355!2.58e-18!57;CL:0000187!1.62e-17!54;CL:0000548!3.92e-17!679;CL:0000004!3.92e-17!679;CL:0000255!3.92e-17!679;CL:0000222!1.80e-16!119;CL:0000012!2.84e-16!682;CL:0000192!4.71e-16!42;CL:0000514!4.71e-16!42;CL:0000393!1.90e-15!60;CL:0000211!1.90e-15!60;CL:0000359!1.97e-13!32;CL:0000144!1.49e-12!625;CL:0000057!1.41e-11!75;CL:0002371!1.93e-09!591;CL:0000066!2.42e-08!254;CL:0000003!5.31e-08!722;CL:0002494!5.84e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.37e-13;32!CL:0000192;7.67e-12;43!CL:0000187;1.66e-10;55!CL:0000393;1.57e-08;61!CL:0000211;1.57e-08;61!CL:0002494;2.15e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.78e-21,250;CL:0000680,5.83e-20,58;CL:0000056,5.83e-20,58;CL:0000355,5.83e-20,58;CL:0000187,4.39e-19,55;CL:0000222,2.32e-17,121;CL:0000192,3.83e-17,43;CL:0000514,3.83e-17,43;CL:0000393,1.98e-16,61;CL:0000211,1.98e-16,61;CL:0000359,1.40e-14,32;CL:0000057,1.07e-11,76;CL:0002494,1.74e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;7.67e-12;43!CL:0000355;3.02e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!1.12e-17!82;UBERON:0004290!1.90e-17!70;UBERON:0000914!4.59e-17!83;UBERON:0002329!4.59e-17!83;UBERON:0003077!4.59e-17!83;UBERON:0003059!4.59e-17!83;UBERON:0007282!4.59e-17!83;UBERON:0009618!4.59e-17!83;UBERON:0007285!4.59e-17!83;UBERON:0001134!5.46e-16!61;UBERON:0002036!5.46e-16!61;UBERON:0003082!5.46e-16!61;UBERON:0002385!2.77e-14!63;UBERON:0001015!2.77e-14!63;UBERON:0000383!2.77e-14!63;UBERON:0002100!3.01e-14!216;UBERON:0000475!4.06e-14!365;UBERON:0001637!4.19e-13!42;UBERON:0003509!4.19e-13!42;UBERON:0004572!4.19e-13!42;UBERON:0005256!1.03e-12!143;UBERON:0003104!6.27e-12!238;UBERON:0009142!6.27e-12!238;UBERON:0002049!6.75e-12!79;UBERON:0007798!6.75e-12!79;UBERON:0004872!2.11e-11!84;UBERON:0000481!5.91e-11!347;UBERON:0000490!9.10e-11!138;UBERON:0000119!1.71e-10!312;UBERON:0000483!2.08e-10!309;UBERON:0003914!2.63e-10!118;UBERON:0004573!3.91e-10!33;UBERON:0004571!3.91e-10!33;UBERON:0001981!1.42e-09!60;UBERON:0007500!1.42e-09!60;UBERON:0004537!1.42e-09!60;UBERON:0006965!1.42e-09!60;UBERON:0000055!2.45e-09!69;UBERON:0004535!1.10e-08!110;UBERON:0001009!6.52e-08!113;UBERON:0000477!8.23e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.08e-09;42!UBERON:0003509;1.08e-09;42!UBERON:0004572;1.08e-09;42!UBERON:0004573;3.49e-09;33!UBERON:0004571;3.49e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.68e-20,78;UBERON:0000486,5.30e-20,83;UBERON:0002329,7.76e-20,71;UBERON:0003059,7.76e-20,71;UBERON:0007282,7.76e-20,71;UBERON:0004290,7.76e-20,71;UBERON:0009618,7.76e-20,71;UBERON:0003077,3.94e-19,72;UBERON:0007285,3.94e-19,72;UBERON:0007524,1.90e-18,73;UBERON:0001134,5.58e-18,62;UBERON:0002036,5.58e-18,62;UBERON:0003082,5.58e-18,62;UBERON:0002385,1.43e-16,64;UBERON:0001015,1.43e-16,64;UBERON:0000383,1.43e-16,64;UBERON:0001637,5.78e-14,42;UBERON:0003509,5.78e-14,42;UBERON:0004572,5.78e-14,42;UBERON:0002100,5.44e-13,199;UBERON:0003104,1.50e-12,160;UBERON:0009142,1.50e-12,160;UBERON:0005256,1.95e-12,122;UBERON:0000490,5.01e-12,148;UBERON:0004872,6.21e-12,83;UBERON:0002049,7.57e-12,78;UBERON:0007798,7.57e-12,78;UBERON:0004573,1.03e-10,33;UBERON:0004571,1.03e-10,33;UBERON:0003914,2.47e-10,117;UBERON:0004535,4.96e-10,109;UBERON:0007500,8.69e-10,59;UBERON:0001981,8.69e-10,59;UBERON:0004537,8.69e-10,59;UBERON:0006965,8.69e-10,59;UBERON:0000055,2.90e-09,68;UBERON:0001009,4.76e-09,112;UBERON:0000119,2.54e-08,309;UBERON:0000483,3.08e-08,306;UBERON:0003102,2.59e-07,99;UBERON:0002199,9.00e-07,46;UBERON:0002416,9.00e-07,46 | |||
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| ||
|short_description=p4@EEF1D | |||
}} | }} |
Latest revision as of 22:39, 16 September 2015
Short description: | p4@EEF1D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EEF1D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000526133, ENST00000531953_5end |
EntrezGene: | EEF1D |
HGNC: | 3211 |
UniProt: | E9PJ84E9PIP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.78e-21 | 250 |
muscle precursor cell | 5.83e-20 | 58 |
myoblast | 5.83e-20 | 58 |
multi-potent skeletal muscle stem cell | 5.83e-20 | 58 |
muscle cell | 4.39e-19 | 55 |
mesodermal cell | 2.32e-17 | 121 |
smooth muscle cell | 3.83e-17 | 43 |
smooth muscle myoblast | 3.83e-17 | 43 |
electrically responsive cell | 1.98e-16 | 61 |
electrically active cell | 1.98e-16 | 61 |
vascular associated smooth muscle cell | 1.40e-14 | 32 |
fibroblast | 1.07e-11 | 76 |
cardiocyte | 1.74e-07 | 16 |