FFCP PHASE1:Hg19::chr8:141018634..141018657,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83696 | |EntrezGene=83696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30832 | |HGNC=30832 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000524162_5end | |||
|cluster_id=chr8:141018634..141018657,- | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_6_at_TRAPPC9_5end | |||
|id=chr8:141018634..141018657,- | |||
|ontology_enrichment_celltype=CL:0002553!7.90e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.88e-21;1!CL:0000123;4.09e-11;2!CL:0000242;4.09e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.88e-21,1;CL:0000242,4.09e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.49e-59;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;1.82e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.75e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.25e-21!57;UBERON:0005068!4.25e-21!57;UBERON:0006241!4.25e-21!57;UBERON:0007135!4.25e-21!57;UBERON:0003076!6.88e-21!15;UBERON:0003057!6.88e-21!15;UBERON:0004733!2.06e-20!12;UBERON:0002028!2.06e-20!12;UBERON:0007277!2.06e-20!12;UBERON:0004732!9.01e-19!13;UBERON:0002616!8.60e-18!59;UBERON:0007023!3.90e-16!115;UBERON:0002680!1.27e-14!9;UBERON:0001895!1.27e-14!9;UBERON:0010092!1.27e-14!9;UBERON:0000955!1.71e-14!69;UBERON:0006238!1.71e-14!69;UBERON:0001017!2.08e-13!82;UBERON:0003075!8.10e-13!86;UBERON:0007284!8.10e-13!86;UBERON:0005743!1.25e-12!86;UBERON:0002346!4.30e-12!90;UBERON:0000073!4.05e-11!94;UBERON:0001016!4.05e-11!94;UBERON:0002298!2.35e-10!8;UBERON:0000025!1.89e-09!194;UBERON:0002037!1.20e-08!6;UBERON:0006215!1.20e-08!6;UBERON:0002780!6.70e-08!41;UBERON:0001890!6.70e-08!41;UBERON:0006240!6.70e-08!41;UBERON:0000988!6.80e-08!3;UBERON:0003080!1.10e-07!42;UBERON:0001896!1.53e-07!3;UBERON:0005290!1.53e-07!3;UBERON:0010096!1.53e-07!3;UBERON:0001894!5.37e-07!7;UBERON:0006222!5.37e-07!7;UBERON:0000033!8.66e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.07e-30;6!UBERON:0002680;1.98e-20;9!UBERON:0001895;1.98e-20;9!UBERON:0004733;1.65e-15;12!UBERON:0002028;1.65e-15;12!UBERON:0004732;2.27e-14;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.08e-30,6;UBERON:0006215,3.08e-30,6;UBERON:0002680,1.98e-20,9;UBERON:0001895,1.98e-20,9;UBERON:0010092,1.98e-20,9;UBERON:0004733,1.65e-15,12;UBERON:0002028,1.65e-15,12;UBERON:0007277,1.65e-15,12;UBERON:0004732,2.28e-14,13;UBERON:0003076,1.52e-12,15;UBERON:0003057,1.52e-12,15 | |||
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|short_description=p6@TRAPPC9 | |||
}} | }} |
Latest revision as of 18:55, 16 September 2015
Short description: | p6@TRAPPC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TRAPPC9_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 30bp_to_ENST00000524162_5end |
EntrezGene: | TRAPPC9 |
HGNC: | 30832 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.88e-21 | 1 |
Merkel cell | 4.09e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.08e-30 | 6 |
rhombic lip | 3.08e-30 | 6 |
regional part of metencephalon | 1.98e-20 | 9 |
metencephalon | 1.98e-20 | 9 |
future metencephalon | 1.98e-20 | 9 |
segmental subdivision of hindbrain | 1.65e-15 | 12 |
hindbrain | 1.65e-15 | 12 |
presumptive hindbrain | 1.65e-15 | 12 |
segmental subdivision of nervous system | 2.28e-14 | 13 |
posterior neural tube | 1.52e-12 | 15 |
chordal neural plate | 1.52e-12 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.75e-13 | 14 |