FFCP PHASE1:Hg19::chr8:134072537..134072550,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:134072537..134072550,- to FFCP PHASE1:Hg19::chr8:134072537..134072550,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6503 | |EntrezGene=6503 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10902 | |HGNC=10902 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000519504_5end | |||
|cluster_id=chr8:134072537..134072550,- | |||
|coexpression_cluster_id=C4729 | |||
|description=CAGE_peak_5_at_SLA_5end | |||
|id=chr8:134072537..134072550,- | |||
|ontology_enrichment_celltype=CL:0000037!5.56e-50!172;CL:0000566!5.56e-50!172;CL:0000988!5.89e-49!182;CL:0000738!2.45e-47!140;CL:0002032!3.01e-45!165;CL:0000837!3.01e-45!165;CL:0002031!3.37e-37!124;CL:0002087!4.12e-36!119;CL:0000542!9.09e-33!53;CL:0000051!9.09e-33!53;CL:0000838!7.64e-32!52;CL:0000084!2.29e-27!25;CL:0000827!2.29e-27!25;CL:0000791!4.93e-20!18;CL:0000789!4.93e-20!18;CL:0002420!4.93e-20!18;CL:0002419!4.93e-20!18;CL:0000790!4.93e-20!18;CL:0000763!5.12e-16!112;CL:0000049!5.12e-16!112;CL:0000625!1.84e-13!11;CL:0000766!3.52e-11!76;CL:0000557!5.08e-11!71;CL:0000236!1.58e-10!14;CL:0000134!1.68e-09!358;CL:0002057!7.95e-09!42;CL:0002320!8.63e-09!365;CL:0000839!8.92e-09!70;CL:0002009!5.81e-08!65;CL:0000860!8.88e-08!45;CL:0000624!1.36e-07!6;CL:0000080!5.24e-07!6;CL:0002194!7.02e-07!63;CL:0000576!7.02e-07!63;CL:0000040!7.02e-07!63;CL:0000559!7.02e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.81e-37;25!CL:0000542;4.23e-27;53!CL:0000791;1.82e-26;18!CL:0000789;1.82e-26;18!CL:0002419;1.82e-26;18!CL:0000625;2.16e-19;11!CL:0000236;1.48e-14;13!CL:0002087;7.19e-11;104!CL:0000624;1.40e-10;6!CL:0000988;6.89e-09;177!CL:0000738;3.15e-08;136!CL:0000945;7.52e-08;24!CL:0000097;1.02e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.27e-45,53;CL:0000051,8.27e-45,53;CL:0000838,1.93e-43,52;CL:0000988,2.37e-41,177;CL:0000037,1.13e-40,168;CL:0000738,6.84e-39,136;CL:0000084,1.60e-37,25;CL:0000827,1.60e-37,25;CL:0002032,5.12e-36,161;CL:0000837,5.12e-36,161;CL:0002031,6.38e-32,120;CL:0002087,4.27e-30,115;CL:0000791,1.62e-26,18;CL:0000789,1.62e-26,18;CL:0002420,1.62e-26,18;CL:0002419,1.62e-26,18;CL:0000790,1.62e-26,18;CL:0000625,2.06e-19,11;CL:0000236,2.43e-13,14;CL:0000624,1.30e-10,6;CL:0000134,1.24e-08,354;CL:0002320,4.02e-08,361;CL:0000945,7.37e-08,24;CL:0000826,7.37e-08,24;CL:0000097,1.04e-07,5;CL:0002028,1.04e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000051;4.23e-27;53!CL:0000790;1.82e-26;18 | |||
|ontology_enrichment_disease=DOID:2531!1.23e-07!51;DOID:0060083!1.23e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.46e-22!102;UBERON:0003061!2.46e-22!102;UBERON:0002193!9.41e-21!112;UBERON:0000178!2.09e-15!15;UBERON:0000179!2.09e-15!15;UBERON:0000463!2.09e-15!15;UBERON:0002371!2.76e-09!80;UBERON:0002405!3.69e-08!115;UBERON:0002384!3.82e-08!375;UBERON:0001474!6.44e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.82e-22;15!UBERON:0000179;1.82e-22;15!UBERON:0000463;1.82e-22;15!UBERON:0002390;8.39e-17;32!UBERON:0002193;3.28e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.46e-22,15;UBERON:0000179,2.46e-22,15;UBERON:0000463,2.46e-22,15;UBERON:0002390,8.22e-16,98;UBERON:0003061,8.22e-16,98;UBERON:0002193,2.02e-15,108;UBERON:0002384,1.96e-07,371 | |||
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| ||
|short_description=p5@SLA | |||
}} | }} |
Latest revision as of 15:03, 16 September 2015
Short description: | p5@SLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLA_5end |
Coexpression cluster: | C4729_Hodgkin_thymus_chronic_hairy_acute_CD8_immature |
Association with transcript: | -4bp_to_ENST00000519504_5end |
EntrezGene: | SLA |
HGNC: | 10902 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.27e-45 | 53 |
common lymphoid progenitor | 8.27e-45 | 53 |
lymphoid lineage restricted progenitor cell | 1.93e-43 | 52 |
hematopoietic cell | 2.37e-41 | 177 |
hematopoietic stem cell | 1.13e-40 | 168 |
leukocyte | 6.84e-39 | 136 |
T cell | 1.60e-37 | 25 |
pro-T cell | 1.60e-37 | 25 |
hematopoietic oligopotent progenitor cell | 5.12e-36 | 161 |
hematopoietic multipotent progenitor cell | 5.12e-36 | 161 |
hematopoietic lineage restricted progenitor cell | 6.38e-32 | 120 |
nongranular leukocyte | 4.27e-30 | 115 |
mature alpha-beta T cell | 1.62e-26 | 18 |
alpha-beta T cell | 1.62e-26 | 18 |
immature T cell | 1.62e-26 | 18 |
mature T cell | 1.62e-26 | 18 |
immature alpha-beta T cell | 1.62e-26 | 18 |
CD8-positive, alpha-beta T cell | 2.06e-19 | 11 |
B cell | 2.43e-13 | 14 |
CD4-positive, alpha-beta T cell | 1.30e-10 | 6 |
mesenchymal cell | 1.24e-08 | 354 |
connective tissue cell | 4.02e-08 | 361 |
lymphocyte of B lineage | 7.37e-08 | 24 |
pro-B cell | 7.37e-08 | 24 |
mast cell | 1.04e-07 | 5 |
basophil mast progenitor cell | 1.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
blood | 2.46e-22 | 15 |
haemolymphatic fluid | 2.46e-22 | 15 |
organism substance | 2.46e-22 | 15 |
hematopoietic system | 8.22e-16 | 98 |
blood island | 8.22e-16 | 98 |
hemolymphoid system | 2.02e-15 | 108 |
connective tissue | 1.96e-07 | 371 |