FFCP PHASE1:Hg19::chr8:126011002..126011010,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:126011002..126011010,+ to FFCP PHASE1:Hg19::chr8:126011002..126011010,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6713 | |EntrezGene=6713 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11279 | |HGNC=11279 | ||
|TSSclassifier=strong | |||
|UniProt=Q14534 | |UniProt=Q14534 | ||
|association_with_transcript=254bp_to_ENST00000265896_5end | |||
|cluster_id=chr8:126011002..126011010,+ | |||
|coexpression_cluster_id=C2881 | |||
|description=CAGE_peak_6_at_SQLE_5end | |||
|id=chr8:126011002..126011010,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.93e-09!182;CL:0002032!6.35e-08!165;CL:0000837!6.35e-08!165;CL:0000037!7.61e-08!172;CL:0000566!7.61e-08!172;CL:0000453!1.97e-07!5;CL:0000034!2.97e-07!444;CL:0000723!3.26e-07!436;CL:0000048!4.03e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000453;7.58e-36;5!CL:0000990;7.15e-20;8!CL:0000451;3.13e-16;10!CL:0001014;1.38e-15;2!CL:0001016;1.38e-15;2!CL:0002600;1.19e-14;2!CL:0000062;2.00e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,7.60e-36,5;CL:0000990,7.16e-20,8;CL:0000451,3.14e-16,10;CL:0001014,1.33e-15,2;CL:0001016,1.33e-15,2;CL:0002600,1.37e-14,2;CL:0000988,3.55e-09,177;CL:0000763,2.77e-08,108;CL:0000049,2.77e-08,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.69e-08;1!DOID:0060061;1.69e-08;1!DOID:8691;1.69e-08;1!DOID:9119;5.06e-08;1!DOID:8552;5.06e-08;1!DOID:8692;3.73e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.75e-08,1;DOID:0060061,1.75e-08,1;DOID:8691,1.75e-08,1;DOID:8552,4.41e-08,1;DOID:9119,4.72e-08,1;DOID:1240,1.02e-07,39;DOID:2531,1.87e-07,51;DOID:0060083,1.87e-07,51;DOID:8692,2.26e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003126;2.05e-09;7!UBERON:0001005;2.05e-09;7!UBERON:0002331;4.46e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.44e-09,7;UBERON:0001005,2.44e-09,7;UBERON:0002331,4.46e-07,10;UBERON:0000358,4.46e-07,10;UBERON:0000307,4.46e-07,10;UBERON:0000091,4.46e-07,10;UBERON:0000087,4.46e-07,10;UBERON:0007010,4.46e-07,10;UBERON:0007806,4.46e-07,10;UBERON:0008780,4.46e-07,10;UBERON:0005728,4.46e-07,10 | |||
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| ||
|short_description=p6@SQLE | |||
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Latest revision as of 02:38, 16 September 2015
Short description: | p6@SQLE |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SQLE_5end |
Coexpression cluster: | C2881_immature_migratory_cord_Mast_mycosis_Smooth_acute |
Association with transcript: | 254bp_to_ENST00000265896_5end |
EntrezGene: | SQLE |
HGNC: | 11279 |
UniProt: | Q14534 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 7.60e-36 | 5 |
conventional dendritic cell | 7.16e-20 | 8 |
dendritic cell | 3.14e-16 | 10 |
CD1a-positive Langerhans cell | 1.33e-15 | 2 |
immature CD1a-positive Langerhans cell | 1.33e-15 | 2 |
smooth muscle cell of trachea | 1.37e-14 | 2 |
hematopoietic cell | 3.55e-09 | 177 |
myeloid cell | 2.77e-08 | 108 |
common myeloid progenitor | 2.77e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.44e-09 | 7 |
respiratory airway | 2.44e-09 | 7 |
umbilical cord | 4.46e-07 | 10 |
blastocyst | 4.46e-07 | 10 |
blastula | 4.46e-07 | 10 |
bilaminar disc | 4.46e-07 | 10 |
inner cell mass | 4.46e-07 | 10 |
cleaving embryo | 4.46e-07 | 10 |
connecting stalk | 4.46e-07 | 10 |
inner cell mass derived epiblast | 4.46e-07 | 10 |
extraembryonic mesoderm | 4.46e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.75e-08 | 1 |
cutaneous T cell lymphoma | 1.75e-08 | 1 |
mycosis fungoides | 1.75e-08 | 1 |
chronic myeloid leukemia | 4.41e-08 | 1 |
acute myeloid leukemia | 4.72e-08 | 1 |
leukemia | 1.02e-07 | 39 |
hematologic cancer | 1.87e-07 | 51 |
immune system cancer | 1.87e-07 | 51 |
myeloid leukemia | 2.26e-07 | 31 |