FFCP PHASE1:Hg19::chr8:117879183..117879190,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5885 | |EntrezGene=5885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9811 | |HGNC=9811 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=39bp_to_ENST00000519469_5end | |||
|cluster_id=chr8:117879183..117879190,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_39_at_RAD21_5end | |||
|id=chr8:117879183..117879190,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;5.96e-34;3!CL:0000136;5.70e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,5.96e-34,3;CL:0000136,5.93e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!2.09e-07!1;DOID:10165!2.09e-07!1;DOID:1798!2.09e-07!1;DOID:225!5.19e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001736!1.44e-07!1;UBERON:0006298!1.44e-07!1;UBERON:0001052!4.62e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.07e-18;6!UBERON:0002358;9.07e-18;6!UBERON:0003684;9.07e-18;6!UBERON:0001178;9.07e-18;6!UBERON:0004457;2.45e-12;9!UBERON:0000042;2.45e-12;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.07e-18,6;UBERON:0002358,9.07e-18,6;UBERON:0003684,9.07e-18,6;UBERON:0001178,9.07e-18,6;UBERON:0004457,1.33e-09,12;UBERON:0000042,1.33e-09,12 | |||
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|short_description=p39@RAD21 | |||
}} | }} |
Latest revision as of 18:49, 15 September 2015
Short description: | p39@RAD21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_RAD21_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 39bp_to_ENST00000519469_5end |
EntrezGene: | RAD21 |
HGNC: | 9811 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 5.96e-34 | 3 |
fat cell | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.07e-18 | 6 |
peritoneum | 9.07e-18 | 6 |
abdominal cavity | 9.07e-18 | 6 |
visceral peritoneum | 9.07e-18 | 6 |
cavity lining | 1.33e-09 | 12 |
serous membrane | 1.33e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.86e-08 | 14 |