FFCP PHASE1:Hg19::chr8:116680833..116680881,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:116680833..116680881,- to FFCP PHASE1:Hg19::chr8:116680833..116680881,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7227 | |EntrezGene=7227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12340 | |HGNC=12340 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHF7 | |UniProt=Q9UHF7 | ||
|association_with_transcript=47bp_to_ENST00000220888_5end | |||
|cluster_id=chr8:116680833..116680881,- | |||
|description=CAGE_peak_7_at_TRPS1_5end | |||
|id=chr8:116680833..116680881,- | |||
|ontology_enrichment_celltype=CL:0002057!2.70e-17!42;CL:0002087!2.87e-15!119;CL:0000860!1.95e-14!45;CL:0002194!2.21e-14!63;CL:0000576!2.21e-14!63;CL:0000040!2.21e-14!63;CL:0000559!2.21e-14!63;CL:0002009!8.78e-14!65;CL:0000738!1.50e-12!140;CL:0002031!2.46e-12!124;CL:0000557!5.43e-12!71;CL:0000839!6.66e-12!70;CL:0000766!7.49e-12!76;CL:0000037!2.04e-08!172;CL:0000566!2.04e-08!172;CL:0002032!2.55e-08!165;CL:0000837!2.55e-08!165;CL:0000988!3.37e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.03e-18;33!CL:0002057;2.03e-18;33!CL:0000576;7.30e-16;48!CL:0000473;7.41e-14;39!CL:0000234;7.41e-14;39!CL:0000766;6.95e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.62e-23,42;CL:0002057,4.62e-23,42;CL:0000473,4.51e-21,48;CL:0000234,4.51e-21,48;CL:0002194,2.88e-20,59;CL:0000576,2.88e-20,59;CL:0000040,2.88e-20,59;CL:0000559,2.88e-20,59;CL:0002087,8.26e-20,115;CL:0002009,4.68e-19,61;CL:0000766,1.81e-16,72;CL:0000839,2.22e-16,66;CL:0000557,6.75e-16,67;CL:0000738,1.00e-15,136;CL:0002031,1.99e-15,120;CL:0000037,6.58e-12,168;CL:0002032,1.57e-11,161;CL:0000837,1.57e-11,161;CL:0000988,1.29e-10,177;CL:0000763,6.13e-10,108;CL:0000049,6.13e-10,108;CL:0000134,1.68e-07,354;CL:0002320,2.49e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.91e-13!102;UBERON:0003061!2.91e-13!102;UBERON:0004765!1.26e-11!101;UBERON:0001434!1.26e-11!101;UBERON:0002371!1.81e-11!80;UBERON:0001474!2.20e-11!86;UBERON:0002193!1.33e-10!112;UBERON:0007023!1.30e-09!115;UBERON:0001049!6.27e-07!57;UBERON:0005068!6.27e-07!57;UBERON:0006241!6.27e-07!57;UBERON:0007135!6.27e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.93e-16,98;UBERON:0003061,4.93e-16,98;UBERON:0001474,1.34e-15,82;UBERON:0002371,9.13e-15,76;UBERON:0002193,3.37e-14,108;UBERON:0001434,3.42e-14,100;UBERON:0004765,5.74e-14,90;UBERON:0002405,6.03e-12,93;UBERON:0002384,4.10e-07,371 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,1.11389717664042,0.662794751455832,0,0.602694528023977,0,0.975865597581014,0.246242116153576,0.612002073732759,0,0,1.36874425072884,0.376627918784408,0,0,0,0.786728553697808,4.98978217526377,1.70297735647684,0,0.30120591877825,0.369754010166788,0.309868802321207,0.853015394924529,0.293600439334847,2.21598163412751,1.80490002723128,1.08505435357926,1.56740831967947,0.971680998056939,1.03030227053675,3.19876125315042,1.88937971844405,3.88134497900506,2.78914844286822,1.23350366406548,1.54853185447552,7.76769459269806,2.81776777182011,5.67557351732605,3.7922024881028,1.93645405075148,1.35426486594342,3.38836211176688,1.91034305040492,2.02251136000576,1.53041946185451,1.60464513538047,1.27867425159808,1.31940520074686,2.59302754908121,2.13112375266347,1.45104619314292,1.70215567407342,1.86846674698672,5.02497330513487,1.0429658368404,3.25783267057675,3.02699751316684,1.84138817993782,0.632924774881769,2.11255286311942,1.70083439972035,0.838634582033504,2.02191536063691,2.25265339262259,2.4108838004562,1.14005097496499,1.39241674039363,1.0959849225878,1.75996244461323,0.546138611262131,0.889509253863555,0.426730222566507,0.800791974072025,0.574752439954483,1.32208974556972,0,2.84606484554724,0,1.91136614062614,0,0.560508562981536,0.526768169550154,2.360517241366,3.14408610199332,2.67281948699362,1.00311897234407,1.30368906653436,0.946895611469467,1.94826728407911,0.334231370655521,0,0.221533894583621,1.89562704635511,0.384273959177026,0.260118695119756,0.164437904603676,0.276350017785848,0.579606171470105,1.92772532110679,1.60524496853828,1.04535523804977,0.113309342697566,2.68254345521345,3.4362744548263,4.80737414837055,0.637130828648193,0.651083453856419,1.90090408889675,0.752875595388864,1.15187950038977,2.49861453104692,0.947109008176067,2.46338399076314,4.83856183739358,4.01160293675261,2.46201486600758,0,0,0.895037932904712,2.53007406669196,2.50668955317945,1.73815822752988,3.1811437882044,7.78615792484217,1.03988298880475,0.443458794925128,0.614843499851882,0.654895377488563,0,0,0.649094787309367,0,0.797747763113191,0.953962497221368,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.488124115096339,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,1.19168262731897,1.43418310374407,1.06400514659507,0,0,0.49333509683432,3.7345324247972,1.48181739276657,1.9615428373615,0.302714855289863,0.576175924479999,0,1.5608003841516,0,0.448346041655403,0.469737994575059,0.647491777472526,0.842704840213491,1.02077085627447,1.22834317311768,0.413303124703062,0,1.23633464639278,0,0,0.336672227908132,1.62654075833553,1.10825646193673,0.438977620880838,0.919463387397059,0.300476117813194,1.13432183160021,2.15267562826634,0.427114777637135,1.48352330811693,0.900273288253207,1.03052529238439,1.8034837803194,0.18611685633159,1.35021065793013,0.974370051611986,3.5340728394176,1.38074847963449,0,2.13005755509969,0.906768884048762,0.847802961552438,0.773043412653187,0,0.573609190778008,0.121973706129595,0.265059536642971,0,0,0,0,0,0,0,0.928735856063958,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,1.47008711385542,0,0.982827216677626,0.590789906681404,0,0,0.343135620597051,0.109750285408626,0,0.100528972411631,0.370353780634118,0,0,0,0.115930404975077,1.17408694235822,0,0,0,3.95102198979638,0.858486162094873,2.95460407304877,0.702012795417713,1.78357394746474,0,0.335964256397719,0.425325291727159,0.358234090811393,0,0,0.492663237895943,0,0.829312462163088,0.576479813667846,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0,0,0.784917590417525,0,0.36669142910475,0.775630294546667,0,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0,0.977208552881205,0.710783897485092,0.791951872933429,0.602878754119172,0.871533458600294,0.499864955910285,0,0,0,0.479249710983165,0,0,0.868687840005475,0.821905290201534,0.895304816199478,0,2.36436912242313,2.15627574859517,1.92514554419623,3.55732473911449,2.60279707715243,0,0,0.637938751653163,0,0,1.24324654030811,0.981531933753119,1.50051156317903,0.542530047399471,1.03985430765404,0.713715955188647,1.10391690523754,0.35142424497814,0.601892199455438,0,0,2.65690239414175,0,0.347534457872331,0,0,1.86091223510599,2.5885704098234,3.09509917629989,0,0,0,0.496215615637554,1.07423381301644,0.841980283299221,1.15325234330131,0.511707249066704,0.64341568457443,1.48418066444991,0,0.355123450626254,0.657017248110473,1.03850885836724,0.581051892299796,0,1.00253235151642,0.184161977871793,0.114814448164607,0.182091168006717,0.393373244878272,0,0.462092022626489,0,0,0.527758144464379,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.206082023295445,5.67730681873729,5.44562699475881,0.574265537996172,0.650060246036521,0,1.45006077438183,0.616194468458578,0.767518373630648,0.413509717453592,1.826144162760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|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,1.11389717664042,0.662794751455832,0,0.602694528023977,0,0.975865597581014,0.246242116153576,0.612002073732759,0,0,1.36874425072884,0.376627918784408,0,0,0,0.786728553697808,4.98978217526377,1.70297735647684,0,0.30120591877825,0.369754010166788,0.309868802321207,0.853015394924529,0.293600439334847,2.21598163412751,1.80490002723128,1.08505435357926,1.56740831967947,0.971680998056939,1.03030227053675,3.19876125315042,1.88937971844405,3.88134497900506,2.78914844286822,1.23350366406548,1.54853185447552,7.76769459269806,2.81776777182011,5.67557351732605,3.7922024881028,1.93645405075148,1.35426486594342,3.38836211176688,1.91034305040492,2.02251136000576,1.53041946185451,1.60464513538047,1.27867425159808,1.31940520074686,2.59302754908121,2.13112375266347,1.45104619314292,1.70215567407342,1.86846674698672,5.02497330513487,1.0429658368404,3.25783267057675,3.02699751316684,1.84138817993782,0.632924774881769,2.11255286311942,1.70083439972035,0.838634582033504,2.02191536063691,2.25265339262259,2.4108838004562,1.14005097496499,1.39241674039363,1.0959849225878,1.75996244461323,0.546138611262131,0.889509253863555,0.426730222566507,0.800791974072025,0.574752439954483,1.32208974556972,0,2.84606484554724,0,1.91136614062614,0,0.560508562981536,0.526768169550154,2.360517241366,3.14408610199332,2.67281948699362,1.00311897234407,1.30368906653436,0.946895611469467,1.94826728407911,0.334231370655521,0,0.221533894583621,1.89562704635511,0.384273959177026,0.260118695119756,0.164437904603676,0.276350017785848,0.579606171470105,1.92772532110679,1.60524496853828,1.04535523804977,0.113309342697566,2.68254345521345,3.4362744548263,4.80737414837055,0.637130828648193,0.651083453856419,1.90090408889675,0.752875595388864,1.15187950038977,2.49861453104692,0.947109008176067,2.46338399076314,4.83856183739358,4.01160293675261,2.46201486600758,0,0,0.895037932904712,2.53007406669196,2.50668955317945,1.73815822752988,3.1811437882044,7.78615792484217,1.03988298880475,0.443458794925128,0.614843499851882,0.654895377488563,0,0,0.649094787309367,0,0.797747763113191,0.953962497221368,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.488124115096339,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,1.19168262731897,1.43418310374407,1.06400514659507,0,0,0.49333509683432,3.7345324247972,1.48181739276657,1.9615428373615,0.302714855289863,0.576175924479999,0,1.5608003841516,0,0.448346041655403,0.469737994575059,0.647491777472526,0.842704840213491,1.02077085627447,1.22834317311768,0.413303124703062,0,1.23633464639278,0,0,0.336672227908132,1.62654075833553,1.10825646193673,0.438977620880838,0.919463387397059,0.300476117813194,1.13432183160021,2.15267562826634,0.427114777637135,1.48352330811693,0.900273288253207,1.03052529238439,1.8034837803194,0.18611685633159,1.35021065793013,0.974370051611986,3.5340728394176,1.38074847963449,0,2.13005755509969,0.906768884048762,0.847802961552438,0.773043412653187,0,0.573609190778008,0.121973706129595,0.265059536642971,0,0,0,0,0,0,0,0.928735856063958,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,1.47008711385542,0,0.982827216677626,0.590789906681404,0,0,0.343135620597051,0.109750285408626,0,0.100528972411631,0.370353780634118,0,0,0,0.115930404975077,1.17408694235822,0,0,0,3.95102198979638,0.858486162094873,2.95460407304877,0.702012795417713,1.78357394746474,0,0.335964256397719,0.425325291727159,0.358234090811393,0,0,0.492663237895943,0,0.829312462163088,0.576479813667846,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0,0,0.784917590417525,0,0.36669142910475,0.775630294546667,0,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0,0.977208552881205,0.710783897485092,0.791951872933429,0.602878754119172,0.871533458600294,0.499864955910285,0,0,0,0.479249710983165,0,0,0.868687840005475,0.821905290201534,0.895304816199478,0,2.36436912242313,2.15627574859517,1.92514554419623,3.55732473911449,2.60279707715243,0,0,0.637938751653163,0,0,1.24324654030811,0.981531933753119,1.50051156317903,0.542530047399471,1.03985430765404,0.713715955188647,1.10391690523754,0.35142424497814,0.601892199455438,0,0,2.65690239414175,0,0.347534457872331,0,0,1.86091223510599,2.5885704098234,3.09509917629989,0,0,0,0.496215615637554,1.07423381301644,0.841980283299221,1.15325234330131,0.511707249066704,0.64341568457443,1.48418066444991,0,0.355123450626254,0.657017248110473,1.03850885836724,0.581051892299796,0,1.00253235151642,0.184161977871793,0.114814448164607,0.182091168006717,0.393373244878272,0,0.462092022626489,0,0,0.527758144464379,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.206082023295445,5.67730681873729,5.44562699475881,0.574265537996172,0.650060246036521,0,1.45006077438183,0.616194468458578,0.767518373630648,0.413509717453592,1.826144162760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| ||
|short_description=p7@TRPS1 | |||
}} | }} |
Latest revision as of 06:36, 25 September 2015
Short description: | p7@TRPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TRPS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 47bp_to_ENST00000220888_5end |
EntrezGene: | TRPS1 |
HGNC: | 12340 |
UniProt: | Q9UHF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.62e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.62e-23 | 42 |
defensive cell | 4.51e-21 | 48 |
phagocyte | 4.51e-21 | 48 |
monopoietic cell | 2.88e-20 | 59 |
monocyte | 2.88e-20 | 59 |
monoblast | 2.88e-20 | 59 |
promonocyte | 2.88e-20 | 59 |
nongranular leukocyte | 8.26e-20 | 115 |
macrophage dendritic cell progenitor | 4.68e-19 | 61 |
myeloid leukocyte | 1.81e-16 | 72 |
myeloid lineage restricted progenitor cell | 2.22e-16 | 66 |
granulocyte monocyte progenitor cell | 6.75e-16 | 67 |
leukocyte | 1.00e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 1.99e-15 | 120 |
hematopoietic stem cell | 6.58e-12 | 168 |
hematopoietic oligopotent progenitor cell | 1.57e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-11 | 161 |
hematopoietic cell | 1.29e-10 | 177 |
myeloid cell | 6.13e-10 | 108 |
common myeloid progenitor | 6.13e-10 | 108 |
mesenchymal cell | 1.68e-07 | 354 |
connective tissue cell | 2.49e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.93e-16 | 98 |
blood island | 4.93e-16 | 98 |
bone element | 1.34e-15 | 82 |
bone marrow | 9.13e-15 | 76 |
hemolymphoid system | 3.37e-14 | 108 |
skeletal system | 3.42e-14 | 100 |
skeletal element | 5.74e-14 | 90 |
immune system | 6.03e-12 | 93 |
connective tissue | 4.10e-07 | 371 |