FFCP PHASE1:Hg19::chr7:86782094..86782108,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:86782094..86782108,+ to FFCP PHASE1:Hg19::chr7:86782094..86782108,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9988 | |EntrezGene=9988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14603 | |HGNC=14603 | ||
|TSSclassifier=strong | |||
|UniProt=C9JVQ7 | |UniProt=C9JVQ7 | ||
|association_with_transcript=147bp_to_ENST00000434534_5end | |||
|cluster_id=chr7:86782094..86782108,+ | |||
|description=CAGE_peak_5_at_DMTF1_5end | |||
|id=chr7:86782094..86782108,+ | |||
|ontology_enrichment_celltype=CL:0000557!9.11e-19!71;CL:0002057!1.49e-18!42;CL:0000860!1.05e-17!45;CL:0000766!1.83e-17!76;CL:0002009!1.18e-16!65;CL:0002194!6.44e-16!63;CL:0000576!6.44e-16!63;CL:0000040!6.44e-16!63;CL:0000559!6.44e-16!63;CL:0000839!7.63e-16!70;CL:0000763!8.96e-14!112;CL:0000049!8.96e-14!112;CL:0000048!1.26e-11!430;CL:0000134!3.28e-11!358;CL:0000723!1.83e-10!436;CL:0002320!7.86e-10!365;CL:0000034!3.26e-09!444;CL:0000219!2.55e-08!390;CL:0000057!5.92e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.46e-15;33!CL:0002057;1.46e-15;33!CL:0000576;2.59e-14;48!CL:0000473;1.56e-12;39!CL:0000234;1.56e-12;39!CL:0000766;1.04e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,8.67e-25,67;CL:0000860,4.26e-24,42;CL:0002057,4.26e-24,42;CL:0000766,2.43e-23,72;CL:0000473,4.14e-23,48;CL:0000234,4.14e-23,48;CL:0002009,1.87e-22,61;CL:0000839,1.30e-21,66;CL:0002194,1.99e-21,59;CL:0000576,1.99e-21,59;CL:0000040,1.99e-21,59;CL:0000559,1.99e-21,59;CL:0000763,1.17e-15,108;CL:0000049,1.17e-15,108;CL:0000048,2.12e-14,427;CL:0000723,1.79e-13,433;CL:0000134,2.70e-13,354;CL:0000034,1.32e-12,441;CL:0002320,3.45e-12,361;CL:0000219,1.27e-09,386;CL:0000057,3.61e-08,76;CL:0002393,1.41e-07,9;CL:0002397,1.41e-07,9;CL:0000738,3.56e-07,136;CL:0002031,8.43e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;8.34e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.60e-18!80;UBERON:0001474!5.34e-17!86;UBERON:0004765!9.43e-16!101;UBERON:0001434!9.43e-16!101;UBERON:0002193!3.48e-14!112;UBERON:0002390!4.41e-13!102;UBERON:0003061!4.41e-13!102;UBERON:0002405!5.01e-13!115;UBERON:0002204!2.94e-12!167;UBERON:0002384!2.10e-10!375;UBERON:0000062!8.27e-08!511;UBERON:0000467!4.82e-07!625;UBERON:0000480!5.26e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.12e-24,76;UBERON:0001474,1.37e-22,82;UBERON:0002405,3.24e-21,93;UBERON:0004765,2.24e-19,90;UBERON:0001434,7.83e-18,100;UBERON:0002193,2.98e-16,108;UBERON:0002390,7.97e-16,98;UBERON:0003061,7.97e-16,98;UBERON:0002204,8.44e-14,167;UBERON:0002384,1.12e-12,371;UBERON:0000926,3.33e-10,315;UBERON:0004120,3.33e-10,315;UBERON:0006603,3.33e-10,315;UBERON:0003081,2.97e-08,203 | |||
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| ||
|short_description=p5@DMTF1 | |||
}} | }} |
Latest revision as of 20:53, 19 September 2015
Short description: | p5@DMTF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DMTF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 147bp_to_ENST00000434534_5end |
EntrezGene: | DMTF1 |
HGNC: | 14603 |
UniProt: | C9JVQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 8.67e-25 | 67 |
classical monocyte | 4.26e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.26e-24 | 42 |
myeloid leukocyte | 2.43e-23 | 72 |
defensive cell | 4.14e-23 | 48 |
phagocyte | 4.14e-23 | 48 |
macrophage dendritic cell progenitor | 1.87e-22 | 61 |
myeloid lineage restricted progenitor cell | 1.30e-21 | 66 |
monopoietic cell | 1.99e-21 | 59 |
monocyte | 1.99e-21 | 59 |
monoblast | 1.99e-21 | 59 |
promonocyte | 1.99e-21 | 59 |
myeloid cell | 1.17e-15 | 108 |
common myeloid progenitor | 1.17e-15 | 108 |
multi fate stem cell | 2.12e-14 | 427 |
somatic stem cell | 1.79e-13 | 433 |
mesenchymal cell | 2.70e-13 | 354 |
stem cell | 1.32e-12 | 441 |
connective tissue cell | 3.45e-12 | 361 |
motile cell | 1.27e-09 | 386 |
fibroblast | 3.61e-08 | 76 |
intermediate monocyte | 1.41e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.41e-07 | 9 |
leukocyte | 3.56e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 8.43e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.12e-24 | 76 |
bone element | 1.37e-22 | 82 |
immune system | 3.24e-21 | 93 |
skeletal element | 2.24e-19 | 90 |
skeletal system | 7.83e-18 | 100 |
hemolymphoid system | 2.98e-16 | 108 |
hematopoietic system | 7.97e-16 | 98 |
blood island | 7.97e-16 | 98 |
musculoskeletal system | 8.44e-14 | 167 |
connective tissue | 1.12e-12 | 371 |
mesoderm | 3.33e-10 | 315 |
mesoderm-derived structure | 3.33e-10 | 315 |
presumptive mesoderm | 3.33e-10 | 315 |
lateral plate mesoderm | 2.97e-08 | 203 |