FFCP PHASE1:Hg19::chr7:81399438..81399454,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:81399438..81399454,- to FFCP PHASE1:Hg19::chr7:81399438..81399454,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3082 | |EntrezGene=3082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4893 | |HGNC=4893 | ||
|TSSclassifier=strong | |||
|UniProt=C9JBP9,P14210 | |UniProt=C9JBP9,P14210 | ||
|association_with_transcript=0bp_to_ENST00000394769,NM_000601,NM_001010931,NM_001010932,NM_001010933,NM_001010934,uc003uhl.2,uc003uhm.2,uc003uhn.1,uc003uho.1,uc003uhp.2_5end | |||
|cluster_id=chr7:81399438..81399454,- | |||
|coexpression_cluster_id=C2904 | |||
|description=CAGE_peak_2_at_HGF_5end | |||
|id=chr7:81399438..81399454,- | |||
|ontology_enrichment_celltype=CL:0000187!1.93e-17!54;CL:0000680!3.08e-17!57;CL:0000056!3.08e-17!57;CL:0000355!3.08e-17!57;CL:0000393!4.44e-16!60;CL:0000211!4.44e-16!60;CL:0000183!9.25e-15!59;CL:0000055!2.75e-13!180;CL:0000192!7.89e-12!42;CL:0000514!7.89e-12!42;CL:0000048!1.67e-09!430;CL:0000723!7.56e-09!436;CL:0000034!1.04e-08!444;CL:0002494!4.55e-08!16;CL:0000057!6.54e-07!75;CL:0000359!9.74e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000187;1.45e-11;55!CL:0000393;9.18e-10;61!CL:0000211;9.18e-10;61!CL:0002494;9.19e-10;16!CL:0000192;1.00e-09;43!CL:0000188;2.56e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.28e-19,55;CL:0000680,4.91e-19,58;CL:0000056,4.91e-19,58;CL:0000355,4.91e-19,58;CL:0000393,2.71e-17,61;CL:0000211,2.71e-17,61;CL:0000192,6.12e-12,43;CL:0000514,6.12e-12,43;CL:0002494,8.62e-10,16;CL:0000048,8.06e-08,427;CL:0000188,2.44e-07,9;CL:0000723,2.67e-07,433;CL:0000057,4.65e-07,76;CL:0000034,5.13e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000355;2.32e-11;58!CL:0000514;1.00e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.21e-20!83;UBERON:0002329!8.21e-20!83;UBERON:0003077!8.21e-20!83;UBERON:0003059!8.21e-20!83;UBERON:0007282!8.21e-20!83;UBERON:0009618!8.21e-20!83;UBERON:0007285!8.21e-20!83;UBERON:0002385!1.56e-17!63;UBERON:0001015!1.56e-17!63;UBERON:0000383!1.56e-17!63;UBERON:0004290!1.80e-17!70;UBERON:0001134!2.83e-17!61;UBERON:0002036!2.83e-17!61;UBERON:0003082!2.83e-17!61;UBERON:0005256!1.17e-13!143;UBERON:0002204!5.09e-13!167;UBERON:0000486!1.36e-12!82;UBERON:0000481!4.80e-11!347;UBERON:0000922!7.86e-11!612;UBERON:0002050!1.30e-10!605;UBERON:0005423!1.30e-10!605;UBERON:0000479!1.71e-10!787;UBERON:0000923!2.25e-10!604;UBERON:0005291!2.25e-10!604;UBERON:0006598!2.25e-10!604;UBERON:0002532!2.25e-10!604;UBERON:0000948!4.38e-10!24;UBERON:0005498!4.38e-10!24;UBERON:0004140!4.38e-10!24;UBERON:0009881!4.38e-10!24;UBERON:0004141!4.38e-10!24;UBERON:0003084!4.38e-10!24;UBERON:0007005!4.38e-10!24;UBERON:0004139!4.38e-10!24;UBERON:0004291!4.38e-10!24;UBERON:0007023!5.69e-10!115;UBERON:0000468!1.57e-09!659;UBERON:0000926!1.70e-09!448;UBERON:0004120!1.70e-09!448;UBERON:0006603!1.70e-09!448;UBERON:0000467!5.15e-09!625;UBERON:0000483!6.01e-09!309;UBERON:0000477!6.73e-09!286;UBERON:0004872!6.84e-09!84;UBERON:0000480!7.21e-09!626;UBERON:0000119!7.55e-09!312;UBERON:0000490!9.80e-09!138;UBERON:0007100!1.36e-08!27;UBERON:0004535!2.98e-08!110;UBERON:0001009!8.07e-08!113;UBERON:0000025!8.86e-08!194;UBERON:0004111!1.63e-07!241;UBERON:0000475!1.66e-07!365;UBERON:0002100!7.86e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.10e-10;22!UBERON:0007100;9.21e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.45e-18,73;UBERON:0002329,3.85e-18,71;UBERON:0003059,3.85e-18,71;UBERON:0007282,3.85e-18,71;UBERON:0004290,3.85e-18,71;UBERON:0009618,3.85e-18,71;UBERON:0002385,4.70e-18,64;UBERON:0001015,4.70e-18,64;UBERON:0000383,4.70e-18,64;UBERON:0001134,5.28e-18,62;UBERON:0002036,5.28e-18,62;UBERON:0003082,5.28e-18,62;UBERON:0003077,1.11e-17,72;UBERON:0007285,1.11e-17,72;UBERON:0005256,5.36e-17,122;UBERON:0007503,3.50e-15,78;UBERON:0003104,2.17e-14,160;UBERON:0009142,2.17e-14,160;UBERON:0000486,2.08e-13,83;UBERON:0000948,2.89e-12,24;UBERON:0005498,2.89e-12,24;UBERON:0004140,2.89e-12,24;UBERON:0009881,2.89e-12,24;UBERON:0004141,2.89e-12,24;UBERON:0003084,2.89e-12,24;UBERON:0007005,2.89e-12,24;UBERON:0004139,2.89e-12,24;UBERON:0004291,2.89e-12,24;UBERON:0000490,5.68e-12,148;UBERON:0007100,3.25e-10,27;UBERON:0002204,1.32e-09,167;UBERON:0000926,2.20e-09,315;UBERON:0004120,2.20e-09,315;UBERON:0006603,2.20e-09,315;UBERON:0002100,2.60e-09,199;UBERON:0000923,4.13e-09,560;UBERON:0010316,4.13e-09,560;UBERON:0005291,4.13e-09,560;UBERON:0006598,4.13e-09,560;UBERON:0010317,4.13e-09,560;UBERON:0002532,4.13e-09,560;UBERON:0002050,4.31e-09,564;UBERON:0004872,8.89e-09,83;UBERON:0005423,4.93e-08,581;UBERON:0000922,7.37e-08,592;UBERON:0001007,2.43e-07,145;UBERON:0001555,2.43e-07,145;UBERON:0007026,2.43e-07,145;UBERON:0000483,5.04e-07,306;UBERON:0000119,9.59e-07,309 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,12.0026775951098,0.261185628199839,0.737201809504527,0,0,0,2.97039247104112,0.662794751455832,0,0,0.730310090387373,0.975865597581014,0,0,0,0.572471974262113,0.136874425072884,0,0.152826811495903,0.164201178899891,0.236132343941038,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0.142169232487422,6.45920966536664,0,0.200544447470142,0,2.46307021663917,1.94336199611388,3.8636335145128,0.290796477559129,0.755751887377619,0,0,0,0.309706370895104,0,0,0.945928919554341,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0.449446968890169,0,0,0,0.329851300186716,0.398927315243264,0,0,0.56738522469114,0,0.251248665256743,1.5644487552606,0.65156653411535,0.605399502633369,0,0.316462387440884,0.633765858935825,0,0.209658645508376,0.336985893439485,0.150176892841506,0.64290234678832,0.570025487482497,0.99458338599545,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,7.90152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,92.6466091993054,20.7917266508127,2.42938867502708,0,0,0.434539556882471,0,0,0,0,0,0.851363990735132,0,0,0,0,0.132957960518865,0,0,0,0,1.72046919021225,0,0.56530794192401,0.419499436209906,0,0,0,0.35576626268671,0,0,0,0,0.735326160691737,0,0.267899184852239,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,9.75244510545967,3.90135220418193,2.24271040056923,0,0.24666754841716,42.635911849768,8.21735099625097,28.6058330448553,1.81628913173918,2.30470369792,2.81185718200556,4.68240115245481,2.85235910772225,10.4614076386261,1.76151747965647,0,0.421352420106746,13.474175302823,2.7023549808589,10.2292523364008,23.7600571456411,6.42894016124248,0.910161361938026,0,12.4568724326009,16.1402890634834,6.09541054065202,1.31693286264251,0,9.6152357700222,2.83580457900053,0,0.427114777637135,0.847727604638247,0.300091096084402,1.44273540933814,0.515281080091258,0.558350568994769,0,0,0.757301322732344,0.460249493211497,0,0,0,0.67824236924195,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0.643240938192885,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,2.057870056657,1.47008711385542,2.53510069643662,3.9313088667105,23.0408063605748,0,0,0.343135620597051,0,0,0,0,0,6.23960871167747,0,0,0,0,0,0,0,0,1.47730203652438,0,0.148631162288728,0.93733833986777,0,0,0,0,0,1.97065295158377,0.880484340132261,0.829312462163088,1.8735593944205,0.6312121671319,1.46045156871989,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.22001485746285,0.129271715757778,0,12.67954128834,0.26593811658487,0,0.771622122786426,0,1.8649552531127,242.061743263244,0,0,12.7037111874557,208.259681963132,2.37585561880029,0,0,0.099972991182057,1.2162378064119,4.01805673145701,2.10833939483032,1.19812427745791,2.29723871668228,1.42636905040718,0.579125226670317,2.26023954805422,0,0,0,0,0,2.28685161800217,3.90419561572865,0.773288812777695,0.837581326671744,1.27587750330633,0,0,0,2.82190430954022,7.00238729483548,0.813795071099207,0,0,0,0,2.70851489754947,2.27407504055985,0,5.97803038681893,1.47495334833363,2.78027566297865,0,0,0.413536052245775,0.431428401637234,0.213455115606889,0,0,0.30239029332968,0,0,0,0,0,0,0,5.24312958929029,3.72879623157567,9.44462294158805,36.3478100428535,4.53220475993841,0,0,0,31.6887876934315,23.3076695048598,14.0303124006584,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0,0,17.2078489451696,0,0,0,0,0,1.16004861950546,6.77813915304435,7.21467271212809,1.7918754422989,4.51165028446749,2.0302337147992,5.19882427238216,1.4245125703478,0,0,0,0,0,0.94443704049192,3.485186350803,5.23657086299351,1.59691809095107,0.869932992075073,0,3.72124705529177,0.372158369359667,0.949138274156178,8.76898892049594,1.02359116524534,4.2793898803392,30.229308552964,2.35484592059769,13.4904343187486,35.4152768359511,17.0827983401245,3.03273722359974,1.58510321173008,0.842516912477962,6.33923860816467,12.9168149504581,1.05650146756755,8.32649459588713,33.9373036688911,12.4308928282267,3.30819206127675,7.96126770289464,3.5076070820301,2.31510213706675,9.83842128069949,0,1.239293992399,1.12678241012897,0.860468113224309,0.294747123039363,0,29.7999293819302,0.844430541190656,0.329294892959902,1.13841952129715,2.0996083214699,0,0,0,18.9229039561326,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,0,0,0.540031437238115,0.79312517629427,0,0,0,0.185803175125719,0,0,0,39.5167155436977,0,0,0,0.561594356226918,0,0.156679895773023,0,0,0,0,0.851692475380653,17.8622779272998,0,0,0,0.390776190804081,0,1.23087398947712,0,0,0,142.97537287188,1.46508179271894,0.121360521749513,0,0,0,0.296964680832639,0,0.994147647766298,0.703347082052564,0.111308705022906,0,0,2.39097585901284,0,0,0,0,0,0,0,0,1.87422470710174,2.3948309234694,0,0.969332746095218,1.57705766875147,0,0,0,1.44999915086959,0,0,0,0.344743373241465,0,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0,0.87754158861589,0,0,1.07730361905316,0.113942055847001,0,0,0,0,0,0.533034776018635,0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| ||
|short_description=p2@HGF | |||
}} | }} |
Latest revision as of 18:07, 19 September 2015
Short description: | p2@HGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HGF_5end |
Coexpression cluster: | C2904_Mesenchymal_adenocarcinoma_Cardiac_small_sacrococcigeal_Preadipocyte_Smooth |
Association with transcript: | 0bp_to_ENST00000394769, NM_000601, NM_001010931, NM_001010932, NM_001010933, NM_001010934, uc003uhl.2, uc003uhm.2, uc003uhn.1, uc003uho.1, uc003uhp.2_5end |
EntrezGene: | HGF |
HGNC: | 4893 |
UniProt: | C9JBP9P14210 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.28e-19 | 55 |
muscle precursor cell | 4.91e-19 | 58 |
myoblast | 4.91e-19 | 58 |
multi-potent skeletal muscle stem cell | 4.91e-19 | 58 |
electrically responsive cell | 2.71e-17 | 61 |
electrically active cell | 2.71e-17 | 61 |
smooth muscle cell | 6.12e-12 | 43 |
smooth muscle myoblast | 6.12e-12 | 43 |
cardiocyte | 8.62e-10 | 16 |
multi fate stem cell | 8.06e-08 | 427 |
cell of skeletal muscle | 2.44e-07 | 9 |
somatic stem cell | 2.67e-07 | 433 |
fibroblast | 4.65e-07 | 76 |
stem cell | 5.13e-07 | 441 |